RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 POLR3GLQ9BT43 218 aa30.63■■■□□ 2.49
SNX3-202ENST00000349379 ANKRD26Q9UPS8 1709 aa30.63■■■□□ 2.49
SNX3-202ENST00000349379 COG3Q96JB2 828 aa30.62■■■□□ 2.49
SNX3-202ENST00000349379 AXIN2Q9Y2T1 843 aa30.62■■■□□ 2.49
SNX3-202ENST00000349379 ZBTB7CA1YPR0 619 aa30.61■■■□□ 2.49
SNX3-202ENST00000349379 WNK3Q9BYP7 1800 aa30.61■■■□□ 2.49
SNX3-202ENST00000349379 EVA1CP58658 441 aa30.6■■■□□ 2.49
SNX3-202ENST00000349379 LARP1Q6PKG0 1096 aaKnown RBP30.6■■■□□ 2.49
SNX3-202ENST00000349379 KIF7Q2M1P5 1343 aa30.59■■■□□ 2.49
SNX3-202ENST00000349379 SEPT12Q8IYM1 358 aa30.59■■■□□ 2.49
SNX3-202ENST00000349379 CRB1P82279 1406 aa30.58■■■□□ 2.49
SNX3-202ENST00000349379 GGNBP2Q9H3C7 697 aa30.58■■■□□ 2.49
SNX3-202ENST00000349379 FAM98CQ17RN3 349 aaKnown RBP30.57■■■□□ 2.48
SNX3-202ENST00000349379 WDR17Q8IZU2 1322 aa30.54■■■□□ 2.48
SNX3-202ENST00000349379 PARP4Q9UKK3 1724 aaKnown RBP30.54■■■□□ 2.48
SNX3-202ENST00000349379 BARGINQ6ZT62 677 aa30.53■■■□□ 2.48
SNX3-202ENST00000349379 PANK3Q9H999 370 aa30.53■■■□□ 2.48
SNX3-202ENST00000349379 FAM208AQ9UK61 1670 aaKnown RBP30.52■■■□□ 2.48
SNX3-202ENST00000349379 UPF1Q92900 1129 aaKnown RBP eCLIP30.52■■■□□ 2.48
SNX3-202ENST00000349379 CGNL1Q0VF96 1302 aa30.51■■■□□ 2.48
SNX3-202ENST00000349379 BLMP54132 1417 aaPredicted RBP30.51■■■□□ 2.47
SNX3-202ENST00000349379 THRAP3Q9Y2W1 955 aaKnown RBP30.51■■■□□ 2.47
SNX3-202ENST00000349379 MAP3K19Q56UN5 1328 aa30.5■■■□□ 2.47
SNX3-202ENST00000349379 MAP2P11137 1827 aaKnown RBP30.5■■■□□ 2.47
SNX3-202ENST00000349379 TCP11L2Q8N4U5 519 aa30.5■■■□□ 2.47
SNX3-202ENST00000349379 USP35Q9P2H5 1018 aa30.49■■■□□ 2.47
SNX3-202ENST00000349379 PEAK1Q9H792 1746 aa30.49■■■□□ 2.47
SNX3-202ENST00000349379 CCDC7Q96M83 1385 aa30.49■■■□□ 2.47
SNX3-202ENST00000349379 ERBB3P21860 1342 aa30.48■■■□□ 2.47
SNX3-202ENST00000349379 FBLN1P23142 703 aa30.48■■■□□ 2.47
SNX3-202ENST00000349379 IP6K1Q92551 441 aa30.47■■■□□ 2.47
SNX3-202ENST00000349379 RTL1A6NKG5 1358 aa30.46■■■□□ 2.47
SNX3-202ENST00000349379 TOM1L2Q6ZVM7 507 aa30.46■■■□□ 2.47
SNX3-202ENST00000349379 KRT27Q7Z3Y8 459 aa30.46■■■□□ 2.47
SNX3-202ENST00000349379 EP400Q96L91 3159 aa30.46■■■□□ 2.47
SNX3-202ENST00000349379 WASHC2AQ641Q2 1341 aa30.46■■■□□ 2.47
SNX3-202ENST00000349379 LRRC37A3O60309 1634 aa30.45■■■□□ 2.47
SNX3-202ENST00000349379 RGPD2P0DJD1 1756 aa30.44■■■□□ 2.46
SNX3-202ENST00000349379 A0A0G2JS52 829 aa30.44■■■□□ 2.46
SNX3-202ENST00000349379 MYT1Q01538 1121 aa30.44■■■□□ 2.46
SNX3-202ENST00000349379 CARD10Q9BWT7 1032 aa30.44■■■□□ 2.46
SNX3-202ENST00000349379 NSD2O96028 1365 aa30.42■■■□□ 2.46
SNX3-202ENST00000349379 HOXC9P31274 260 aa30.42■■■□□ 2.46
SNX3-202ENST00000349379 RRS1Q15050 365 aaKnown RBP30.42■■■□□ 2.46
SNX3-202ENST00000349379 KIF24Q5T7B8 1368 aa30.41■■■□□ 2.46
SNX3-202ENST00000349379 DISP2A7MBM2 1401 aa30.41■■■□□ 2.46
SNX3-202ENST00000349379 CSB-PGBD3P0DP91 1061 aa30.41■■■□□ 2.46
SNX3-202ENST00000349379 ANKRD24Q8TF21 1146 aa30.41■■■□□ 2.46
SNX3-202ENST00000349379 AMPHP49418 695 aa30.38■■■□□ 2.45
SNX3-202ENST00000349379 FLT4P35916 1363 aa30.36■■■□□ 2.45
SNX3-202ENST00000349379 PER1O15534 1290 aaPredicted RBP30.35■■■□□ 2.45
SNX3-202ENST00000349379 INSRP06213 1382 aa30.34■■■□□ 2.45
SNX3-202ENST00000349379 CDCA7Q9BWT1 371 aaPredicted RBP30.34■■■□□ 2.45
SNX3-202ENST00000349379 KNSTRNQ9Y448 316 aa30.34■■■□□ 2.45
SNX3-202ENST00000349379 RGPD1P0DJD0 1748 aa30.33■■■□□ 2.45
SNX3-202ENST00000349379 AMER1Q5JTC6 1135 aaPredicted RBP30.33■■■□□ 2.45
SNX3-202ENST00000349379 EMILIN1Q9Y6C2 1016 aa30.32■■■□□ 2.44
SNX3-202ENST00000349379 CCDC125Q86Z20 511 aa30.31■■■□□ 2.44
SNX3-202ENST00000349379 NLRP2Q9NX02 1062 aa30.31■■■□□ 2.44
SNX3-202ENST00000349379 TNS1Q9HBL0 1735 aaKnown RBP30.3■■■□□ 2.44
SNX3-202ENST00000349379 SBF2Q86WG5 1849 aa30.3■■■□□ 2.44
SNX3-202ENST00000349379 LTV1Q96GA3 475 aaPredicted RBP30.29■■■□□ 2.44
SNX3-202ENST00000349379 SMG6Q86US8 1419 aaKnown RBP30.29■■■□□ 2.44
SNX3-202ENST00000349379 PDE3BQ13370 1112 aa30.28■■■□□ 2.44
SNX3-202ENST00000349379 HSP90AB2PQ58FF8 381 aa30.28■■■□□ 2.44
SNX3-202ENST00000349379 FAM182BQ5T319 152 aa30.28■■■□□ 2.44
SNX3-202ENST00000349379 POLKQ9UBT6 870 aa30.28■■■□□ 2.44
SNX3-202ENST00000349379 DDB1Q16531 1140 aa30.26■■■□□ 2.43
SNX3-202ENST00000349379 TNS2Q63HR2 1409 aa30.26■■■□□ 2.43
SNX3-202ENST00000349379 NPC1L1Q9UHC9 1359 aa30.25■■■□□ 2.43
SNX3-202ENST00000349379 FAM196AQ6ZSG2 479 aa30.24■■■□□ 2.43
SNX3-202ENST00000349379 SHANK3Q9BYB0 1731 aa30.23■■■□□ 2.43
SNX3-202ENST00000349379 IL2RBP14784 551 aa30.22■■■□□ 2.43
SNX3-202ENST00000349379 MORC1Q86VD1 984 aa30.22■■■□□ 2.43
SNX3-202ENST00000349379 OVOS2A0A0G2JMS6 1433 aa30.22■■■□□ 2.43
SNX3-202ENST00000349379 NCAPD2Q15021 1401 aa30.22■■■□□ 2.43
SNX3-202ENST00000349379 TNNT2P45379 298 aaPredicted RBP30.21■■■□□ 2.43
SNX3-202ENST00000349379 NBPF6Q5VWK0 638 aa30.2■■■□□ 2.43
SNX3-202ENST00000349379 NBPF4Q96M43 638 aa30.2■■■□□ 2.43
SNX3-202ENST00000349379 BCL9O00512 1426 aa30.2■■■□□ 2.42
SNX3-202ENST00000349379 ZEB1P37275 1124 aaPredicted RBP30.19■■■□□ 2.42
SNX3-202ENST00000349379 EXOC5O00471 708 aa30.18■■■□□ 2.42
SNX3-202ENST00000349379 PPM1GO15355 546 aaPredicted RBP30.18■■■□□ 2.42
SNX3-202ENST00000349379 MARCH10Q8NA82 808 aaPredicted RBP30.17■■■□□ 2.42
SNX3-202ENST00000349379 MEGF6O75095 1541 aa30.17■■■□□ 2.42
SNX3-202ENST00000349379 SF3B2Q13435 895 aaKnown RBP30.12■■■□□ 2.41
SNX3-202ENST00000349379 CC2D1BQ5T0F9 858 aaKnown RBP30.12■■■□□ 2.41
SNX3-202ENST00000349379 PKD1L3Q7Z443 1732 aa30.12■■■□□ 2.41
SNX3-202ENST00000349379 USHBP1Q8N6Y0 703 aa30.11■■■□□ 2.41
SNX3-202ENST00000349379 TRIM37O94972 964 aa30.1■■■□□ 2.41
SNX3-202ENST00000349379 EIF4A2Q14240 407 aaKnown RBP30.1■■■□□ 2.41
SNX3-202ENST00000349379 DEFB132Q7Z7B7 95 aa30.1■■■□□ 2.41
SNX3-202ENST00000349379 NHSQ6T4R5 1651 aa30.1■■■□□ 2.41
SNX3-202ENST00000349379 RGPD3A6NKT7 1758 aaPredicted RBP30.08■■■□□ 2.41
SNX3-202ENST00000349379 RGPD4Q7Z3J3 1758 aa30.08■■■□□ 2.41
SNX3-202ENST00000349379 EYA1Q99502 592 aa30.07■■■□□ 2.4
SNX3-202ENST00000349379 BAG6P46379 1132 aa30.06■■■□□ 2.4
SNX3-202ENST00000349379 KAT6BQ8WYB5 2073 aa30.06■■■□□ 2.4
SNX3-202ENST00000349379 RREB1Q92766 1687 aa30.05■■■□□ 2.4
SNX3-202ENST00000349379 IGSF1Q8N6C5 1336 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms