RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 CCDC39Q9UFE4 941 aa19.35■□□□□ 0.69
LRP8-202ENST00000347547 KIF1BO60333 1816 aa19.35■□□□□ 0.69
LRP8-202ENST00000347547 SETBP1Q9Y6X0 1596 aa19.35■□□□□ 0.69
LRP8-202ENST00000347547 NPATQ14207 1427 aa19.35■□□□□ 0.69
LRP8-202ENST00000347547 RABEP1Q15276 862 aa19.34■□□□□ 0.69
LRP8-202ENST00000347547 MCTP1Q6DN14 999 aa19.34■□□□□ 0.69
LRP8-202ENST00000347547 RBM42Q9BTD8 480 aaKnown RBP19.34■□□□□ 0.69
LRP8-202ENST00000347547 TNNT2P45379 298 aaPredicted RBP19.33■□□□□ 0.68
LRP8-202ENST00000347547 ALDH1L2Q3SY69 923 aa19.33■□□□□ 0.68
LRP8-202ENST00000347547 CFAP44Q96MT7 982 aa19.33■□□□□ 0.68
LRP8-202ENST00000347547 CWC22Q9HCG8 908 aaKnown RBP19.33■□□□□ 0.68
LRP8-202ENST00000347547 PRIM1P49642 420 aaKnown RBP19.32■□□□□ 0.68
LRP8-202ENST00000347547 U2AF1L5P0DN76 240 aaPredicted RBP19.32■□□□□ 0.68
LRP8-202ENST00000347547 BRPF1P55201 1214 aaPredicted RBP19.32■□□□□ 0.68
LRP8-202ENST00000347547 U2AF1Q01081 240 aaKnown RBP eCLIP19.32■□□□□ 0.68
LRP8-202ENST00000347547 CCDC94Q9BW85 323 aaPredicted RBP19.32■□□□□ 0.68
LRP8-202ENST00000347547 CFAP65Q6ZU64 1925 aaKnown RBP19.31■□□□□ 0.68
LRP8-202ENST00000347547 CDC45O75419 566 aa19.31■□□□□ 0.68
LRP8-202ENST00000347547 CHMP4BQ9H444 224 aaKnown RBP19.31■□□□□ 0.68
LRP8-202ENST00000347547 LRSAM1Q6UWE0 723 aa19.3■□□□□ 0.68
LRP8-202ENST00000347547 PLEKHF1Q96S99 279 aa19.3■□□□□ 0.68
LRP8-202ENST00000347547 TRIM35Q9UPQ4 493 aa19.3■□□□□ 0.68
LRP8-202ENST00000347547 PPIP5K1Q6PFW1 1433 aa19.3■□□□□ 0.68
LRP8-202ENST00000347547 PIK3C2BO00750 1634 aa19.3■□□□□ 0.68
LRP8-202ENST00000347547 AGLP35573 1532 aa19.3■□□□□ 0.68
LRP8-202ENST00000347547 ADGRF5Q8IZF2 1346 aa19.3■□□□□ 0.68
LRP8-202ENST00000347547 ADGRB3O60242 1522 aa19.3■□□□□ 0.68
LRP8-202ENST00000347547 DMTNQ08495 405 aa19.29■□□□□ 0.68
LRP8-202ENST00000347547 TMPOP42166 694 aaKnown RBP19.29■□□□□ 0.68
LRP8-202ENST00000347547 ARHGEF40Q8TER5 1519 aa19.29■□□□□ 0.68
LRP8-202ENST00000347547 PIK3R4Q99570 1358 aa19.28■□□□□ 0.68
LRP8-202ENST00000347547 ANKRD45Q5TZF3 282 aa19.28■□□□□ 0.68
LRP8-202ENST00000347547 SLC12A5Q9H2X9 1139 aa19.28■□□□□ 0.68
LRP8-202ENST00000347547 NCLP19338 710 aaKnown RBP19.28■□□□□ 0.68
LRP8-202ENST00000347547 GPT2Q8TD30 523 aa19.27■□□□□ 0.68
LRP8-202ENST00000347547 ZNF428Q96B54 188 aa19.27■□□□□ 0.68
LRP8-202ENST00000347547 PUS7Q96PZ0 661 aaKnown RBP19.27■□□□□ 0.68
LRP8-202ENST00000347547 QRICH2Q9H0J4 1663 aa19.26■□□□□ 0.67
LRP8-202ENST00000347547 GGT6Q6P531 493 aa19.26■□□□□ 0.67
LRP8-202ENST00000347547 MYRIPQ8NFW9 859 aa19.26■□□□□ 0.67
LRP8-202ENST00000347547 ZBTB7BO15156 539 aaPredicted RBP19.25■□□□□ 0.67
LRP8-202ENST00000347547 COL3A1P02461 1466 aaPredicted RBP19.24■□□□□ 0.67
LRP8-202ENST00000347547 PPLO60437 1756 aa19.24■□□□□ 0.67
LRP8-202ENST00000347547 PREX1Q8TCU6 1659 aa19.23■□□□□ 0.67
LRP8-202ENST00000347547 ANKRD36BQ8N2N9 1353 aa19.23■□□□□ 0.67
LRP8-202ENST00000347547 PRPF40AO75400 957 aaKnown RBP19.23■□□□□ 0.67
LRP8-202ENST00000347547 KIAA2012Q0VF49 1180 aa19.23■□□□□ 0.67
LRP8-202ENST00000347547 ARHGAP45Q92619 1136 aa19.23■□□□□ 0.67
LRP8-202ENST00000347547 PRIMPOLQ96LW4 560 aa19.23■□□□□ 0.67
LRP8-202ENST00000347547 PTCH1Q13635 1447 aa19.23■□□□□ 0.67
LRP8-202ENST00000347547 MBD3O95983 291 aa19.22■□□□□ 0.67
LRP8-202ENST00000347547 ZSCAN20P17040 1043 aaPredicted RBP19.22■□□□□ 0.67
LRP8-202ENST00000347547 GTF2F1P35269 517 aaKnown RBP eCLIP19.22■□□□□ 0.67
LRP8-202ENST00000347547 TMEM63CQ9P1W3 806 aa19.22■□□□□ 0.67
LRP8-202ENST00000347547 RBM27Q9P2N5 1060 aaKnown RBP19.22■□□□□ 0.67
LRP8-202ENST00000347547 PKP1Q13835 747 aa19.21■□□□□ 0.67
LRP8-202ENST00000347547 USP26Q9BXU7 913 aa19.21■□□□□ 0.67
LRP8-202ENST00000347547 ZDHHC9Q9Y397 364 aa19.21■□□□□ 0.67
LRP8-202ENST00000347547 GSPT1P15170 499 aaKnown RBP19.2■□□□□ 0.66
LRP8-202ENST00000347547 HMGN5P82970 282 aaKnown RBP19.2■□□□□ 0.66
LRP8-202ENST00000347547 AK9Q5TCS8 1911 aa19.2■□□□□ 0.66
LRP8-202ENST00000347547 ADGRB1O14514 1584 aa19.2■□□□□ 0.66
LRP8-202ENST00000347547 GTPBP4Q9BZE4 634 aaKnown RBP19.19■□□□□ 0.66
LRP8-202ENST00000347547 SYCE3A1L190 88 aa19.19■□□□□ 0.66
LRP8-202ENST00000347547 SIRT2Q8IXJ6 389 aa19.19■□□□□ 0.66
LRP8-202ENST00000347547 ST18O60284 1047 aa19.18■□□□□ 0.66
LRP8-202ENST00000347547 PLEKHM2Q8IWE5 1019 aa19.17■□□□□ 0.66
LRP8-202ENST00000347547 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.17■□□□□ 0.66
LRP8-202ENST00000347547 CLTCQ00610 1675 aaKnown RBP19.16■□□□□ 0.66
LRP8-202ENST00000347547 TTC22Q5TAA0 569 aa19.16■□□□□ 0.66
LRP8-202ENST00000347547 PRDM10Q9NQV6 1147 aa19.16■□□□□ 0.66
LRP8-202ENST00000347547 MYO5BQ9ULV0 1848 aa19.16■□□□□ 0.66
LRP8-202ENST00000347547 ABCC4O15439 1325 aa19.15■□□□□ 0.66
LRP8-202ENST00000347547 PLEKHG5O94827 1062 aa19.15■□□□□ 0.66
LRP8-202ENST00000347547 INTS3Q68E01 1043 aaKnown RBP19.15■□□□□ 0.66
LRP8-202ENST00000347547 KIF20AO95235 890 aa19.15■□□□□ 0.66
LRP8-202ENST00000347547 ZNF710Q8N1W2 664 aa19.15■□□□□ 0.66
LRP8-202ENST00000347547 PIBF1Q8WXW3 757 aa19.15■□□□□ 0.66
LRP8-202ENST00000347547 TSPY26PQ9H489 355 aa19.15■□□□□ 0.66
LRP8-202ENST00000347547 C14orf93Q9H972 538 aaKnown RBP19.15■□□□□ 0.66
LRP8-202ENST00000347547 ZHX1Q9UKY1 873 aaPredicted RBP19.15■□□□□ 0.66
LRP8-202ENST00000347547 ZGPATQ8N5A5 531 aaKnown RBP19.14■□□□□ 0.66
LRP8-202ENST00000347547 MRPL50Q8N5N7 158 aaKnown RBP19.14■□□□□ 0.66
LRP8-202ENST00000347547 TRAK1Q9UPV9 953 aa19.14■□□□□ 0.66
LRP8-202ENST00000347547 KIF24Q5T7B8 1368 aa19.14■□□□□ 0.65
LRP8-202ENST00000347547 U2SURPO15042 1029 aaKnown RBP19.14■□□□□ 0.65
LRP8-202ENST00000347547 PTMAP06454 111 aaKnown RBP19.13■□□□□ 0.65
LRP8-202ENST00000347547 CHGAP10645 457 aaKnown RBP19.13■□□□□ 0.65
LRP8-202ENST00000347547 UVSSAQ2YD98 709 aa19.13■□□□□ 0.65
LRP8-202ENST00000347547 NSFL1CQ9UNZ2 370 aaKnown RBP19.13■□□□□ 0.65
LRP8-202ENST00000347547 SYAP1Q96A49 352 aaPredicted RBP19.12■□□□□ 0.65
LRP8-202ENST00000347547 TULP4Q9NRJ4 1543 aa19.12■□□□□ 0.65
LRP8-202ENST00000347547 CDC42BPGQ6DT37 1551 aa19.12■□□□□ 0.65
LRP8-202ENST00000347547 ARID3AQ99856 593 aa19.12■□□□□ 0.65
LRP8-202ENST00000347547 C1orf115Q9H7X2 142 aa19.12■□□□□ 0.65
LRP8-202ENST00000347547 NEXMIFQ5QGS0 1516 aa19.12■□□□□ 0.65
LRP8-202ENST00000347547 TMEM131LA2VDJ0 1609 aa19.11■□□□□ 0.65
LRP8-202ENST00000347547 FAM184AQ8NB25 1140 aa19.11■□□□□ 0.65
LRP8-202ENST00000347547 EVC2Q86UK5 1308 aa19.11■□□□□ 0.65
LRP8-202ENST00000347547 LETM1O95202 739 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms