RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 BANK1Q8NDB2 785 aa9.16□□□□□ -0.94
LIN28B-201ENST00000345080 DDX19BQ9UMR2 479 aa9.16□□□□□ -0.94
LIN28B-201ENST00000345080 TRIM6-TRIM34B2RNG4 842 aa9.16□□□□□ -0.94
LIN28B-201ENST00000345080 ERLIN1O75477 346 aa9.16□□□□□ -0.94
LIN28B-201ENST00000345080 MCM2P49736 904 aa9.16□□□□□ -0.94
LIN28B-201ENST00000345080 ZKSCAN2Q63HK3 967 aa9.16□□□□□ -0.94
LIN28B-201ENST00000345080 PAF1Q8N7H5 531 aa9.16□□□□□ -0.94
LIN28B-201ENST00000345080 FBXW7Q969H0 707 aa9.16□□□□□ -0.94
LIN28B-201ENST00000345080 CHMP4CQ96CF2 233 aa9.16□□□□□ -0.94
LIN28B-201ENST00000345080 CPSF2Q9P2I0 782 aaKnown RBP9.16□□□□□ -0.94
LIN28B-201ENST00000345080 DISP3Q9P2K9 1392 aa9.16□□□□□ -0.94
LIN28B-201ENST00000345080 ZKSCAN5Q9Y2L8 839 aa9.16□□□□□ -0.94
LIN28B-201ENST00000345080 DZIP1Q86YF9 867 aaKnown RBP9.16□□□□□ -0.94
LIN28B-201ENST00000345080 DENND4BO75064 1496 aaPredicted RBP9.16□□□□□ -0.94
LIN28B-201ENST00000345080 PANK3Q9H999 370 aa9.15□□□□□ -0.94
LIN28B-201ENST00000345080 DAPK1P53355 1430 aa9.15□□□□□ -0.94
LIN28B-201ENST00000345080 V9GYY5 206 aaPredicted RBP9.15□□□□□ -0.94
LIN28B-201ENST00000345080 INSRP06213 1382 aa9.15□□□□□ -0.94
LIN28B-201ENST00000345080 A0A1B0GUL7 405 aa9.15□□□□□ -0.94
LIN28B-201ENST00000345080 MAP3K9P80192 1104 aa9.15□□□□□ -0.94
LIN28B-201ENST00000345080 EVC2Q86UK5 1308 aa9.15□□□□□ -0.94
LIN28B-201ENST00000345080 GOLIM4O00461 696 aa9.15□□□□□ -0.95
LIN28B-201ENST00000345080 FILIP1Q7Z7B0 1213 aa9.15□□□□□ -0.95
LIN28B-201ENST00000345080 CADPS2Q86UW7 1296 aa9.15□□□□□ -0.95
LIN28B-201ENST00000345080 CNPY4Q8N129 248 aa9.15□□□□□ -0.95
LIN28B-201ENST00000345080 CHMP3Q9Y3E7 222 aa9.15□□□□□ -0.95
LIN28B-201ENST00000345080 RPRD2Q5VT52 1461 aaKnown RBP9.15□□□□□ -0.95
LIN28B-201ENST00000345080 GOLGA6L7A0A1B0GV03 622 aa9.15□□□□□ -0.95
LIN28B-201ENST00000345080 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.95
LIN28B-201ENST00000345080 PIK3R5Q8WYR1 880 aa9.15□□□□□ -0.95
LIN28B-201ENST00000345080 FAM135AQ9P2D6 1515 aa9.14□□□□□ -0.95
LIN28B-201ENST00000345080 SETSIPP0DME0 302 aa9.14□□□□□ -0.95
LIN28B-201ENST00000345080 CERS3Q8IU89 383 aa9.14□□□□□ -0.95
LIN28B-201ENST00000345080 BRMS1Q9HCU9 246 aa9.14□□□□□ -0.95
LIN28B-201ENST00000345080 NESP48681 1621 aa9.14□□□□□ -0.95
LIN28B-201ENST00000345080 TUBB4AP04350 444 aa9.14□□□□□ -0.95
LIN28B-201ENST00000345080 ITPRIPQ8IWB1 547 aa9.14□□□□□ -0.95
LIN28B-201ENST00000345080 TCEAL9Q9UHQ7 104 aa9.14□□□□□ -0.95
LIN28B-201ENST00000345080 NEMFO60524 1076 aa9.14□□□□□ -0.95
LIN28B-201ENST00000345080 TTC31Q49AM3 519 aaPredicted RBP9.14□□□□□ -0.95
LIN28B-201ENST00000345080 TMCO3Q6UWJ1 677 aa9.14□□□□□ -0.95
LIN28B-201ENST00000345080 REC8O95072 547 aa9.13□□□□□ -0.95
LIN28B-201ENST00000345080 CLUAP1Q96AJ1 413 aa9.13□□□□□ -0.95
LIN28B-201ENST00000345080 STRN4Q9NRL3 753 aa9.13□□□□□ -0.95
LIN28B-201ENST00000345080 DHX29Q7Z478 1369 aaKnown RBP9.13□□□□□ -0.95
LIN28B-201ENST00000345080 RAD54L2Q9Y4B4 1467 aa9.13□□□□□ -0.95
LIN28B-201ENST00000345080 TOPBP1Q92547 1522 aa9.13□□□□□ -0.95
LIN28B-201ENST00000345080 GOLGA6L10A0A0M3HER8 536 aa9.13□□□□□ -0.95
LIN28B-201ENST00000345080 GOLGA6L10A6NI86 522 aa9.13□□□□□ -0.95
LIN28B-201ENST00000345080 TSR1Q2NL82 804 aaKnown RBP9.13□□□□□ -0.95
LIN28B-201ENST00000345080 CNKSR2Q8WXI2 1034 aa9.13□□□□□ -0.95
LIN28B-201ENST00000345080 GBP3Q9H0R5 595 aa9.13□□□□□ -0.95
LIN28B-201ENST00000345080 MRVI1Q9Y6F6 885 aa9.13□□□□□ -0.95
LIN28B-201ENST00000345080 STK31Q9BXU1 1019 aa9.13□□□□□ -0.95
LIN28B-201ENST00000345080 KIF21AQ7Z4S6 1674 aa9.13□□□□□ -0.95
LIN28B-201ENST00000345080 NF2P35240 595 aa9.13□□□□□ -0.95
LIN28B-201ENST00000345080 KIAA1328Q86T90 577 aa9.13□□□□□ -0.95
LIN28B-201ENST00000345080 AIDAQ96BJ3 306 aa9.13□□□□□ -0.95
LIN28B-201ENST00000345080 DNAAF4Q8WXU2 420 aa9.12□□□□□ -0.95
LIN28B-201ENST00000345080 NOL7Q9UMY1 257 aaKnown RBP9.12□□□□□ -0.95
LIN28B-201ENST00000345080 XPCQ01831 940 aaPredicted RBP9.12□□□□□ -0.95
LIN28B-201ENST00000345080 SLC52A1Q9NWF4 448 aa9.12□□□□□ -0.95
LIN28B-201ENST00000345080 KLHL40Q2TBA0 621 aa9.12□□□□□ -0.95
LIN28B-201ENST00000345080 MYRIPQ8NFW9 859 aa9.12□□□□□ -0.95
LIN28B-201ENST00000345080 SRRTQ9BXP5 876 aaKnown RBP9.12□□□□□ -0.95
LIN28B-201ENST00000345080 ANKRD30BQ9BXX2 1392 aa9.12□□□□□ -0.95
LIN28B-201ENST00000345080 ZRSR2Q15696 482 aaKnown RBP9.12□□□□□ -0.95
LIN28B-201ENST00000345080 STK32BQ9NY57 414 aa9.12□□□□□ -0.95
LIN28B-201ENST00000345080 IGSF3O75054 1194 aa9.12□□□□□ -0.95
LIN28B-201ENST00000345080 NLRP2Q9NX02 1062 aa9.12□□□□□ -0.95
LIN28B-201ENST00000345080 K7ELQ4 463 aaPredicted RBP9.11□□□□□ -0.95
LIN28B-201ENST00000345080 TOM1L2Q6ZVM7 507 aa9.11□□□□□ -0.95
LIN28B-201ENST00000345080 TROQ12816 1431 aaPredicted RBP9.11□□□□□ -0.95
LIN28B-201ENST00000345080 POTEB2H3BUK9 544 aa9.11□□□□□ -0.95
LIN28B-201ENST00000345080 RUNDC1Q96C34 613 aa9.11□□□□□ -0.95
LIN28B-201ENST00000345080 POLR3GO15318 223 aaPredicted RBP9.11□□□□□ -0.95
LIN28B-201ENST00000345080 MICALCLQ6ZW33 695 aa9.11□□□□□ -0.95
LIN28B-201ENST00000345080 LTV1Q96GA3 475 aaPredicted RBP9.11□□□□□ -0.95
LIN28B-201ENST00000345080 PRDM11Q9NQV5 511 aa9.11□□□□□ -0.95
LIN28B-201ENST00000345080 NAT10Q9H0A0 1025 aaKnown RBP9.1□□□□□ -0.95
LIN28B-201ENST00000345080 TATP17735 454 aaPredicted RBP9.1□□□□□ -0.95
LIN28B-201ENST00000345080 ZNF397Q8NF99 534 aaPredicted RBP9.1□□□□□ -0.95
LIN28B-201ENST00000345080 TCOF1Q13428 1488 aaKnown RBP9.1□□□□□ -0.95
LIN28B-201ENST00000345080 ZNF500O60304 480 aaPredicted RBP9.1□□□□□ -0.95
LIN28B-201ENST00000345080 U2AF1L5P0DN76 240 aaPredicted RBP9.1□□□□□ -0.95
LIN28B-201ENST00000345080 U2AF1Q01081 240 aaKnown RBP eCLIP9.1□□□□□ -0.952e-6■■■■□ 20.6
LIN28B-201ENST00000345080 CEP120Q8N960 986 aa9.1□□□□□ -0.95
LIN28B-201ENST00000345080 EPRSP07814 1512 aaKnown RBP9.1□□□□□ -0.95
LIN28B-201ENST00000345080 GPATCH3Q96I76 525 aa9.1□□□□□ -0.95
LIN28B-201ENST00000345080 TEFQ10587 303 aa9.09□□□□□ -0.95
LIN28B-201ENST00000345080 VPS37DQ86XT2 251 aa9.09□□□□□ -0.95
LIN28B-201ENST00000345080 GBP2P32456 591 aaPredicted RBP9.09□□□□□ -0.95
LIN28B-201ENST00000345080 KIF6Q6ZMV9 814 aa9.09□□□□□ -0.95
LIN28B-201ENST00000345080 MYO6Q9UM54 1294 aa9.09□□□□□ -0.95
LIN28B-201ENST00000345080 IPO7O95373 1038 aaKnown RBP9.09□□□□□ -0.96
LIN28B-201ENST00000345080 LRRFIP1Q32MZ4 808 aaKnown RBP9.09□□□□□ -0.96
LIN28B-201ENST00000345080 DZIP1LQ8IYY4 767 aaKnown RBP9.09□□□□□ -0.96
LIN28B-201ENST00000345080 CCDC141Q6ZP82 1450 aa9.08□□□□□ -0.96
LIN28B-201ENST00000345080 SHTN1A0MZ66 631 aa9.08□□□□□ -0.96
LIN28B-201ENST00000345080 CCDC192P0DO97 292 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms