RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 NOS1P29475 1434 aa10.42□□□□□ -0.74
FGD6-201ENST00000343958 PCMTD1Q96MG8 357 aaPredicted RBP10.42□□□□□ -0.74
FGD6-201ENST00000343958 STRN4Q9NRL3 753 aa10.42□□□□□ -0.74
FGD6-201ENST00000343958 TATP17735 454 aaPredicted RBP10.42□□□□□ -0.74
FGD6-201ENST00000343958 RALYLQ86SE5 291 aaKnown RBP10.42□□□□□ -0.74
FGD6-201ENST00000343958 DHX16O60231 1041 aaKnown RBP10.41□□□□□ -0.74
FGD6-201ENST00000343958 CWC27Q6UX04 472 aaKnown RBP10.41□□□□□ -0.74
FGD6-201ENST00000343958 VPS37DQ86XT2 251 aa10.41□□□□□ -0.74
FGD6-201ENST00000343958 HOMER1Q86YM7 354 aa10.41□□□□□ -0.74
FGD6-201ENST00000343958 SRGAP3O43295 1099 aa10.41□□□□□ -0.74
FGD6-201ENST00000343958 AACSQ86V21 672 aa10.41□□□□□ -0.74
FGD6-201ENST00000343958 DDX54Q8TDD1 881 aaKnown RBP10.41□□□□□ -0.74
FGD6-201ENST00000343958 RBM33Q96EV2 1170 aaKnown RBP10.41□□□□□ -0.74
FGD6-201ENST00000343958 ATP2B1P20020 1258 aa10.41□□□□□ -0.74
FGD6-201ENST00000343958 SPC24Q8NBT2 197 aa10.41□□□□□ -0.74
FGD6-201ENST00000343958 ERICH2A1L162 156 aa10.41□□□□□ -0.74
FGD6-201ENST00000343958 TTC39AQ5SRH9 613 aa10.41□□□□□ -0.74
FGD6-201ENST00000343958 CCDC173Q0VFZ6 552 aa10.4□□□□□ -0.74
FGD6-201ENST00000343958 TBC1D2Q9BYX2 928 aa10.4□□□□□ -0.74
FGD6-201ENST00000343958 A0A0U1RQG5 324 aaPredicted RBP10.4□□□□□ -0.74
FGD6-201ENST00000343958 CYP46A1Q9Y6A2 500 aa10.4□□□□□ -0.74
FGD6-201ENST00000343958 FAM83GA6ND36 823 aa10.4□□□□□ -0.74
FGD6-201ENST00000343958 CABP4P57796 275 aa10.4□□□□□ -0.74
FGD6-201ENST00000343958 IDI1Q13907 227 aa10.4□□□□□ -0.74
FGD6-201ENST00000343958 JAKMIP1Q96N16 626 aaKnown RBP10.4□□□□□ -0.74
FGD6-201ENST00000343958 CWC22Q9HCG8 908 aaKnown RBP10.4□□□□□ -0.74
FGD6-201ENST00000343958 LRPPRCP42704 1394 aaKnown RBP10.4□□□□□ -0.74
FGD6-201ENST00000343958 TRIM27P14373 513 aa10.4□□□□□ -0.75
FGD6-201ENST00000343958 ERC1Q8IUD2 1116 aa10.4□□□□□ -0.75
FGD6-201ENST00000343958 BTBD11A6QL63 1104 aa10.4□□□□□ -0.75
FGD6-201ENST00000343958 SSFA2P28290 1259 aa10.4□□□□□ -0.75
FGD6-201ENST00000343958 PDRG1Q9NUG6 133 aa10.4□□□□□ -0.75
FGD6-201ENST00000343958 NKTRP30414 1462 aaKnown RBP10.39□□□□□ -0.75
FGD6-201ENST00000343958 MBD3O95983 291 aa10.39□□□□□ -0.75
FGD6-201ENST00000343958 NOL10Q9BSC4 688 aaKnown RBP10.39□□□□□ -0.75
FGD6-201ENST00000343958 ZC3H6P61129 1189 aaKnown RBP10.39□□□□□ -0.75
FGD6-201ENST00000343958 MCM2P49736 904 aa10.39□□□□□ -0.75
FGD6-201ENST00000343958 GOLGA6L1Q8N7Z2 621 aa10.39□□□□□ -0.75
FGD6-201ENST00000343958 LARP6Q9BRS8 491 aaKnown RBP10.39□□□□□ -0.75
FGD6-201ENST00000343958 C14orf93Q9H972 538 aaKnown RBP10.39□□□□□ -0.75
FGD6-201ENST00000343958 RRP12Q5JTH9 1297 aaKnown RBP10.38□□□□□ -0.75
FGD6-201ENST00000343958 ZNF771Q7L3S4 317 aaPredicted RBP10.38□□□□□ -0.75
FGD6-201ENST00000343958 PDILTQ8N807 584 aa10.38□□□□□ -0.75
FGD6-201ENST00000343958 FMNL2Q96PY5 1086 aa10.38□□□□□ -0.75
FGD6-201ENST00000343958 TRIM5Q9C035 493 aa10.38□□□□□ -0.75
FGD6-201ENST00000343958 THEMISQ8N1K5 641 aaPredicted RBP10.38□□□□□ -0.75
FGD6-201ENST00000343958 SCAF11Q99590 1463 aaKnown RBP10.38□□□□□ -0.75
FGD6-201ENST00000343958 GNAT3A8MTJ3 354 aa10.38□□□□□ -0.75
FGD6-201ENST00000343958 SDF4Q9BRK5 362 aa10.38□□□□□ -0.75
FGD6-201ENST00000343958 CCDC85AQ96PX6 553 aaPredicted RBP10.38□□□□□ -0.75
FGD6-201ENST00000343958 CCDC61Q9Y6R9 512 aa10.38□□□□□ -0.75
FGD6-201ENST00000343958 THOC2Q8NI27 1593 aaKnown RBP10.37□□□□□ -0.75
FGD6-201ENST00000343958 ALDH1L2Q3SY69 923 aa10.37□□□□□ -0.75
FGD6-201ENST00000343958 TSR1Q2NL82 804 aaKnown RBP10.37□□□□□ -0.75
FGD6-201ENST00000343958 TPM1P09493 284 aa10.37□□□□□ -0.75
FGD6-201ENST00000343958 AMOTL1Q8IY63 956 aa10.37□□□□□ -0.75
FGD6-201ENST00000343958 UPF3BQ9BZI7 483 aaKnown RBP10.37□□□□□ -0.75
FGD6-201ENST00000343958 GPATCH8Q9UKJ3 1502 aaKnown RBP10.37□□□□□ -0.75
FGD6-201ENST00000343958 TPM2P07951 284 aa10.37□□□□□ -0.75
FGD6-201ENST00000343958 SAFBQ15424 915 aaKnown RBP eCLIP10.37□□□□□ -0.75
FGD6-201ENST00000343958 CNNM1Q9NRU3 951 aa10.37□□□□□ -0.75
FGD6-201ENST00000343958 CD109Q6YHK3 1445 aa10.37□□□□□ -0.75
FGD6-201ENST00000343958 HIP1O00291 1037 aa10.37□□□□□ -0.75
FGD6-201ENST00000343958 LETM1O95202 739 aaPredicted RBP10.37□□□□□ -0.75
FGD6-201ENST00000343958 SPINK5Q9NQ38 1064 aaPredicted RBP10.37□□□□□ -0.75
FGD6-201ENST00000343958 CEBPAP49715 358 aaPredicted RBP10.36□□□□□ -0.75
FGD6-201ENST00000343958 SMC2O95347 1197 aa10.36□□□□□ -0.75
FGD6-201ENST00000343958 TNNT3P45378 269 aaPredicted RBP10.36□□□□□ -0.75
FGD6-201ENST00000343958 MBIPQ9NS73 344 aa10.36□□□□□ -0.75
FGD6-201ENST00000343958 CCDC158Q5M9N0 1113 aa10.36□□□□□ -0.75
FGD6-201ENST00000343958 CCDC83Q8IWF9 413 aa10.36□□□□□ -0.75
FGD6-201ENST00000343958 ADGRL1O94910 1474 aa10.36□□□□□ -0.75
FGD6-201ENST00000343958 SAMD1Q6SPF0 538 aaPredicted RBP10.36□□□□□ -0.75
FGD6-201ENST00000343958 WDR33Q9C0J8 1336 aaKnown RBP10.36□□□□□ -0.75
FGD6-201ENST00000343958 MX1P20591 662 aa10.36□□□□□ -0.75
FGD6-201ENST00000343958 KIF6Q6ZMV9 814 aa10.36□□□□□ -0.75
FGD6-201ENST00000343958 LARP1BQ659C4 914 aaKnown RBP10.36□□□□□ -0.75
FGD6-201ENST00000343958 PRPF40BQ6NWY9 871 aaKnown RBP10.36□□□□□ -0.75
FGD6-201ENST00000343958 WASLO00401 505 aaPredicted RBP10.35□□□□□ -0.75
FGD6-201ENST00000343958 TOM1L2Q6ZVM7 507 aa10.35□□□□□ -0.75
FGD6-201ENST00000343958 TSHZ3Q63HK5 1081 aa10.35□□□□□ -0.75
FGD6-201ENST00000343958 ZRANB1Q9UGI0 708 aa10.35□□□□□ -0.75
FGD6-201ENST00000343958 SPG7Q9UQ90 795 aa10.35□□□□□ -0.75
FGD6-201ENST00000343958 STK38Q15208 465 aa10.35□□□□□ -0.75
FGD6-201ENST00000343958 PCDHB15Q9Y5E8 787 aa10.35□□□□□ -0.75
FGD6-201ENST00000343958 MYD88Q99836 296 aa10.35□□□□□ -0.75
FGD6-201ENST00000343958 TBC1D2BQ9UPU7 963 aa10.35□□□□□ -0.75
FGD6-201ENST00000343958 AEBP1Q8IUX7 1158 aa10.35□□□□□ -0.75
FGD6-201ENST00000343958 CIZ1Q9ULV3 898 aaPredicted RBP10.35□□□□□ -0.75
FGD6-201ENST00000343958 CCDC8Q9H0W5 538 aaPredicted RBP10.34□□□□□ -0.75
FGD6-201ENST00000343958 TAF7Q15545 349 aaPredicted RBP10.34□□□□□ -0.75
FGD6-201ENST00000343958 CCDC47Q96A33 483 aaKnown RBP10.34□□□□□ -0.75
FGD6-201ENST00000343958 DDX11Q96FC9 970 aa10.34□□□□□ -0.75
FGD6-201ENST00000343958 OLFM4Q6UX06 510 aa10.34□□□□□ -0.75
FGD6-201ENST00000343958 FERMT3Q86UX7 667 aa10.34□□□□□ -0.75
FGD6-201ENST00000343958 TNPO1Q92973 898 aaKnown RBP10.34□□□□□ -0.75
FGD6-201ENST00000343958 TTLL5Q6EMB2 1281 aa10.34□□□□□ -0.75
FGD6-201ENST00000343958 HOOK1Q9UJC3 728 aaKnown RBP10.34□□□□□ -0.75
FGD6-201ENST00000343958 DHX29Q7Z478 1369 aaKnown RBP10.34□□□□□ -0.75
FGD6-201ENST00000343958 MNS1Q8NEH6 495 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms