RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 PLEKHF1Q96S99 279 aa19.49■□□□□ 0.71
CXCL12-201ENST00000343575 ARHGEF10O15013 1369 aa19.48■□□□□ 0.71
CXCL12-201ENST00000343575 PHRF1Q9P1Y6 1649 aaKnown RBP19.48■□□□□ 0.71
CXCL12-201ENST00000343575 AHDC1Q5TGY3 1603 aaPredicted RBP19.47■□□□□ 0.71
CXCL12-201ENST00000343575 APAF1O14727 1248 aa19.47■□□□□ 0.71
CXCL12-201ENST00000343575 IP6K1Q92551 441 aa19.46■□□□□ 0.71
CXCL12-201ENST00000343575 SALL2Q9Y467 1007 aaPredicted RBP19.46■□□□□ 0.71
CXCL12-201ENST00000343575 RGPD1P0DJD0 1748 aa19.46■□□□□ 0.71
CXCL12-201ENST00000343575 RTL1A6NKG5 1358 aa19.46■□□□□ 0.71
CXCL12-201ENST00000343575 RUNDC1Q96C34 613 aa19.45■□□□□ 0.7
CXCL12-201ENST00000343575 IQSEC2Q5JU85 1478 aa19.45■□□□□ 0.7
CXCL12-201ENST00000343575 TOM1O60784 492 aa19.45■□□□□ 0.7
CXCL12-201ENST00000343575 RSPH6AQ9H0K4 717 aa19.45■□□□□ 0.7
CXCL12-201ENST00000343575 FCHSD2O94868 740 aa19.44■□□□□ 0.7
CXCL12-201ENST00000343575 HMOX1P09601 288 aa19.43■□□□□ 0.7
CXCL12-201ENST00000343575 ZC3H6P61129 1189 aaKnown RBP19.43■□□□□ 0.7
CXCL12-201ENST00000343575 CERKQ8TCT0 537 aa19.43■□□□□ 0.7
CXCL12-201ENST00000343575 AXIN2Q9Y2T1 843 aa19.43■□□□□ 0.7
CXCL12-201ENST00000343575 TCP11L2Q8N4U5 519 aa19.42■□□□□ 0.7
CXCL12-201ENST00000343575 ZNF521Q96K83 1311 aa19.42■□□□□ 0.7
CXCL12-201ENST00000343575 NEFLP07196 543 aa19.41■□□□□ 0.7
CXCL12-201ENST00000343575 AEBP1Q8IUX7 1158 aa19.41■□□□□ 0.7
CXCL12-201ENST00000343575 PIP4K2BP78356 416 aa19.41■□□□□ 0.7
CXCL12-201ENST00000343575 EYA1Q99502 592 aa19.41■□□□□ 0.7
CXCL12-201ENST00000343575 COL18A1P39060 1754 aa19.41■□□□□ 0.7
CXCL12-201ENST00000343575 ABCA3Q99758 1704 aa19.4■□□□□ 0.7
CXCL12-201ENST00000343575 UBAP1LF5GYI3 381 aa19.4■□□□□ 0.7
CXCL12-201ENST00000343575 PRKAR2BP31323 418 aa19.4■□□□□ 0.7
CXCL12-201ENST00000343575 IGSF1Q8N6C5 1336 aa19.39■□□□□ 0.7
CXCL12-201ENST00000343575 ZBTB7CA1YPR0 619 aa19.39■□□□□ 0.7
CXCL12-201ENST00000343575 LRRC59Q96AG4 307 aaKnown RBP19.39■□□□□ 0.7
CXCL12-201ENST00000343575 PHACTR3Q96KR7 559 aa19.39■□□□□ 0.7
CXCL12-201ENST00000343575 CPDO75976 1380 aa19.39■□□□□ 0.69
CXCL12-201ENST00000343575 COL16A1Q07092 1604 aaPredicted RBP19.39■□□□□ 0.69
CXCL12-201ENST00000343575 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
CXCL12-201ENST00000343575 RRP7AQ9Y3A4 280 aaKnown RBP19.39■□□□□ 0.69
CXCL12-201ENST00000343575 RGPD5Q99666 1765 aa19.38■□□□□ 0.69
CXCL12-201ENST00000343575 SULT6B1Q6IMI4 303 aa19.38■□□□□ 0.69
CXCL12-201ENST00000343575 KDRP35968 1356 aa19.38■□□□□ 0.69
CXCL12-201ENST00000343575 KIAA0232Q92628 1395 aa19.38■□□□□ 0.69
CXCL12-201ENST00000343575 LTV1Q96GA3 475 aaPredicted RBP19.37■□□□□ 0.69
CXCL12-201ENST00000343575 CDCA7LQ96GN5 454 aa19.37■□□□□ 0.69
CXCL12-201ENST00000343575 PHLPP1O60346 1717 aa19.36■□□□□ 0.69
CXCL12-201ENST00000343575 TMPOP42166 694 aaKnown RBP19.35■□□□□ 0.69
CXCL12-201ENST00000343575 CHRNA2Q15822 529 aa19.35■□□□□ 0.69
CXCL12-201ENST00000343575 NBPF6Q5VWK0 638 aa19.35■□□□□ 0.69
CXCL12-201ENST00000343575 NBPF4Q96M43 638 aa19.35■□□□□ 0.69
CXCL12-201ENST00000343575 RGPD2P0DJD1 1756 aa19.35■□□□□ 0.69
CXCL12-201ENST00000343575 NEUROD2Q15784 382 aa19.35■□□□□ 0.69
CXCL12-201ENST00000343575 WWC1Q8IX03 1113 aa19.35■□□□□ 0.69
CXCL12-201ENST00000343575 COL22A1Q8NFW1 1626 aaPredicted RBP19.34■□□□□ 0.69
CXCL12-201ENST00000343575 NGEFQ8N5V2 710 aa19.34■□□□□ 0.69
CXCL12-201ENST00000343575 PNNQ9H307 717 aaKnown RBP19.34■□□□□ 0.69
CXCL12-201ENST00000343575 FKBP8Q14318 412 aa19.33■□□□□ 0.69
CXCL12-201ENST00000343575 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.69
CXCL12-201ENST00000343575 ERBB3P21860 1342 aa19.33■□□□□ 0.68
CXCL12-201ENST00000343575 ANKRD24Q8TF21 1146 aa19.33■□□□□ 0.68
CXCL12-201ENST00000343575 SPINK5Q9NQ38 1064 aaPredicted RBP19.33■□□□□ 0.68
CXCL12-201ENST00000343575 TRIM35Q9UPQ4 493 aa19.33■□□□□ 0.68
CXCL12-201ENST00000343575 ABCC6O95255 1503 aa19.32■□□□□ 0.68
CXCL12-201ENST00000343575 MAPK8IP3Q9UPT6 1336 aa19.32■□□□□ 0.68
CXCL12-201ENST00000343575 PDE3BQ13370 1112 aa19.32■□□□□ 0.68
CXCL12-201ENST00000343575 CCDC27Q2M243 656 aa19.32■□□□□ 0.68
CXCL12-201ENST00000343575 USHBP1Q8N6Y0 703 aa19.31■□□□□ 0.68
CXCL12-201ENST00000343575 NCAPD2Q15021 1401 aa19.31■□□□□ 0.68
CXCL12-201ENST00000343575 LMO7Q8WWI1 1683 aa19.31■□□□□ 0.68
CXCL12-201ENST00000343575 CAMTA1Q9Y6Y1 1673 aa19.3■□□□□ 0.68
CXCL12-201ENST00000343575 PRDM11Q9NQV5 511 aa19.29■□□□□ 0.68
CXCL12-201ENST00000343575 FAM83GA6ND36 823 aa19.28■□□□□ 0.68
CXCL12-201ENST00000343575 RIPK4P57078 832 aa19.28■□□□□ 0.68
CXCL12-201ENST00000343575 NFE2L2Q16236 605 aa19.28■□□□□ 0.68
CXCL12-201ENST00000343575 GOLGA2Q08379 1002 aa19.28■□□□□ 0.68
CXCL12-201ENST00000343575 HAP1P54257 671 aaPredicted RBP19.27■□□□□ 0.68
CXCL12-201ENST00000343575 SLFN5Q08AF3 891 aa19.27■□□□□ 0.68
CXCL12-201ENST00000343575 TRMT2AQ8IZ69 625 aaKnown RBP19.27■□□□□ 0.68
CXCL12-201ENST00000343575 DLG5Q8TDM6 1919 aa19.26■□□□□ 0.67
CXCL12-201ENST00000343575 DUSP27Q5VZP5 1158 aa19.26■□□□□ 0.67
CXCL12-201ENST00000343575 MTHFSDQ2M296 383 aaKnown RBP19.24■□□□□ 0.67
CXCL12-201ENST00000343575 WDR63Q8IWG1 891 aa19.24■□□□□ 0.67
CXCL12-201ENST00000343575 FAM208AQ9UK61 1670 aaKnown RBP19.24■□□□□ 0.67
CXCL12-201ENST00000343575 COL5A2P05997 1499 aaPredicted RBP19.24■□□□□ 0.67
CXCL12-201ENST00000343575 NEFMP07197 916 aa19.24■□□□□ 0.67
CXCL12-201ENST00000343575 RBM19Q9Y4C8 960 aaKnown RBP19.23■□□□□ 0.67
CXCL12-201ENST00000343575 THUMPD2Q9BTF0 503 aaKnown RBP19.21■□□□□ 0.67
CXCL12-201ENST00000343575 NLRP2Q9NX02 1062 aa19.21■□□□□ 0.67
CXCL12-201ENST00000343575 E9PSI1 815 aa19.2■□□□□ 0.66
CXCL12-201ENST00000343575 WDR17Q8IZU2 1322 aa19.2■□□□□ 0.66
CXCL12-201ENST00000343575 BCL11AQ9H165 835 aa19.2■□□□□ 0.66
CXCL12-201ENST00000343575 CSB-PGBD3P0DP91 1061 aa19.19■□□□□ 0.66
CXCL12-201ENST00000343575 DCTN1Q14203 1278 aa19.19■□□□□ 0.66
CXCL12-201ENST00000343575 COL14A1Q05707 1796 aaKnown RBP19.19■□□□□ 0.66
CXCL12-201ENST00000343575 ERICH6BQ5W0A0 696 aa19.18■□□□□ 0.66
CXCL12-201ENST00000343575 HSPA1LP34931 641 aa19.18■□□□□ 0.66
CXCL12-201ENST00000343575 BTG4Q9NY30 223 aa19.18■□□□□ 0.66
CXCL12-201ENST00000343575 JCADQ9P266 1359 aa19.17■□□□□ 0.66
CXCL12-201ENST00000343575 LARP1Q6PKG0 1096 aaKnown RBP19.17■□□□□ 0.66
CXCL12-201ENST00000343575 IL16Q14005 1332 aa19.17■□□□□ 0.66
CXCL12-201ENST00000343575 ADAMTS2O95450 1211 aa19.16■□□□□ 0.66
CXCL12-201ENST00000343575 GAS2L2Q8NHY3 880 aa19.16■□□□□ 0.66
CXCL12-201ENST00000343575 MEGF6O75095 1541 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms