RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 RRP7AQ9Y3A4 280 aaKnown RBP18.49■□□□□ 0.55
PMS1-201ENST00000342075 FLT4P35916 1363 aa18.49■□□□□ 0.55
PMS1-201ENST00000342075 PHLPP1O60346 1717 aa18.48■□□□□ 0.55
PMS1-201ENST00000342075 INSRP06213 1382 aa18.48■□□□□ 0.55
PMS1-201ENST00000342075 APAF1O14727 1248 aa18.48■□□□□ 0.55
PMS1-201ENST00000342075 KCNH5Q8NCM2 988 aa18.48■□□□□ 0.55
PMS1-201ENST00000342075 ARHGEF25Q86VW2 580 aa18.47■□□□□ 0.55
PMS1-201ENST00000342075 ARHGEF10O15013 1369 aa18.47■□□□□ 0.55
PMS1-201ENST00000342075 AHDC1Q5TGY3 1603 aaPredicted RBP18.47■□□□□ 0.55
PMS1-201ENST00000342075 NEUROD2Q15784 382 aa18.47■□□□□ 0.55
PMS1-201ENST00000342075 RGPD2P0DJD1 1756 aa18.47■□□□□ 0.55
PMS1-201ENST00000342075 ABCA3Q99758 1704 aa18.46■□□□□ 0.55
PMS1-201ENST00000342075 USHBP1Q8N6Y0 703 aa18.46■□□□□ 0.55
PMS1-201ENST00000342075 KIAA0232Q92628 1395 aa18.46■□□□□ 0.54
PMS1-201ENST00000342075 NUDCQ9Y266 331 aa18.45■□□□□ 0.54
PMS1-201ENST00000342075 COL16A1Q07092 1604 aaPredicted RBP18.45■□□□□ 0.54
PMS1-201ENST00000342075 LRRC59Q96AG4 307 aaKnown RBP18.45■□□□□ 0.54
PMS1-201ENST00000342075 HAP1P54257 671 aaPredicted RBP18.44■□□□□ 0.54
PMS1-201ENST00000342075 PRKAR2BP31323 418 aa18.43■□□□□ 0.54
PMS1-201ENST00000342075 SULT6B1Q6IMI4 303 aa18.43■□□□□ 0.54
PMS1-201ENST00000342075 IP6K1Q92551 441 aa18.43■□□□□ 0.54
PMS1-201ENST00000342075 PLEKHF1Q96S99 279 aa18.43■□□□□ 0.54
PMS1-201ENST00000342075 PHACTR3Q96KR7 559 aa18.43■□□□□ 0.54
PMS1-201ENST00000342075 EYA1Q99502 592 aa18.43■□□□□ 0.54
PMS1-201ENST00000342075 RSPH6AQ9H0K4 717 aa18.43■□□□□ 0.54
PMS1-201ENST00000342075 ZBED9Q6R2W3 1325 aa18.43■□□□□ 0.54
PMS1-201ENST00000342075 RGPD1P0DJD0 1748 aa18.42■□□□□ 0.54
PMS1-201ENST00000342075 TCP11L2Q8N4U5 519 aa18.41■□□□□ 0.54
PMS1-201ENST00000342075 CENPBP07199 599 aaPredicted RBP18.4■□□□□ 0.54
PMS1-201ENST00000342075 RUNDC1Q96C34 613 aa18.4■□□□□ 0.54
PMS1-201ENST00000342075 COL18A1P39060 1754 aa18.4■□□□□ 0.54
PMS1-201ENST00000342075 CDCA7LQ96GN5 454 aa18.4■□□□□ 0.54
PMS1-201ENST00000342075 IQSEC2Q5JU85 1478 aa18.4■□□□□ 0.54
PMS1-201ENST00000342075 NBPF6Q5VWK0 638 aa18.39■□□□□ 0.54
PMS1-201ENST00000342075 NBPF4Q96M43 638 aa18.39■□□□□ 0.54
PMS1-201ENST00000342075 RTL1A6NKG5 1358 aa18.39■□□□□ 0.53
PMS1-201ENST00000342075 ANKRD24Q8TF21 1146 aa18.39■□□□□ 0.53
PMS1-201ENST00000342075 PRDM11Q9NQV5 511 aa18.38■□□□□ 0.53
PMS1-201ENST00000342075 NUTM2BA6NNL0 878 aaPredicted RBP18.37■□□□□ 0.53
PMS1-201ENST00000342075 NUTM2EB1AL46 878 aaPredicted RBP18.37■□□□□ 0.53
PMS1-201ENST00000342075 NUTM2AQ8IVF1 878 aaPredicted RBP18.37■□□□□ 0.53
PMS1-201ENST00000342075 IGSF1Q8N6C5 1336 aa18.36■□□□□ 0.53
PMS1-201ENST00000342075 FAM83GA6ND36 823 aa18.36■□□□□ 0.53
PMS1-201ENST00000342075 ADAMTS2O95450 1211 aa18.36■□□□□ 0.53
PMS1-201ENST00000342075 KIF24Q5T7B8 1368 aa18.36■□□□□ 0.53
PMS1-201ENST00000342075 FCHSD2O94868 740 aa18.36■□□□□ 0.53
PMS1-201ENST00000342075 CAMTA1Q9Y6Y1 1673 aa18.35■□□□□ 0.53
PMS1-201ENST00000342075 SPINK5Q9NQ38 1064 aaPredicted RBP18.35■□□□□ 0.53
PMS1-201ENST00000342075 ERBB3P21860 1342 aa18.35■□□□□ 0.53
PMS1-201ENST00000342075 MAPK8IP3Q9UPT6 1336 aa18.34■□□□□ 0.53
PMS1-201ENST00000342075 CPDO75976 1380 aa18.34■□□□□ 0.53
PMS1-201ENST00000342075 HSPA1LP34931 641 aa18.33■□□□□ 0.53
PMS1-201ENST00000342075 COL22A1Q8NFW1 1626 aaPredicted RBP18.33■□□□□ 0.53
PMS1-201ENST00000342075 TMPOP42166 694 aaKnown RBP18.33■□□□□ 0.52
PMS1-201ENST00000342075 DLG5Q8TDM6 1919 aa18.32■□□□□ 0.52
PMS1-201ENST00000342075 THUMPD2Q9BTF0 503 aaKnown RBP18.32■□□□□ 0.52
PMS1-201ENST00000342075 STRN4Q9NRL3 753 aa18.32■□□□□ 0.52
PMS1-201ENST00000342075 LMO7Q8WWI1 1683 aa18.32■□□□□ 0.52
PMS1-201ENST00000342075 CSB-PGBD3P0DP91 1061 aa18.31■□□□□ 0.52
PMS1-201ENST00000342075 ZNF521Q96K83 1311 aa18.31■□□□□ 0.52
PMS1-201ENST00000342075 WWC1Q8IX03 1113 aa18.31■□□□□ 0.52
PMS1-201ENST00000342075 NLRP2Q9NX02 1062 aa18.31■□□□□ 0.52
PMS1-201ENST00000342075 KDRP35968 1356 aa18.31■□□□□ 0.52
PMS1-201ENST00000342075 RIPK4P57078 832 aa18.31■□□□□ 0.52
PMS1-201ENST00000342075 TRIM35Q9UPQ4 493 aa18.3■□□□□ 0.52
PMS1-201ENST00000342075 DCTN1Q14203 1278 aa18.3■□□□□ 0.52
PMS1-201ENST00000342075 BTG4Q9NY30 223 aa18.29■□□□□ 0.52
PMS1-201ENST00000342075 COL5A2P05997 1499 aaPredicted RBP18.28■□□□□ 0.52
PMS1-201ENST00000342075 MTHFSDQ2M296 383 aaKnown RBP18.28■□□□□ 0.52
PMS1-201ENST00000342075 USP35Q9P2H5 1018 aa18.28■□□□□ 0.52
PMS1-201ENST00000342075 LARP1Q6PKG0 1096 aaKnown RBP18.28■□□□□ 0.52
PMS1-201ENST00000342075 NFE2L2Q16236 605 aa18.26■□□□□ 0.51
PMS1-201ENST00000342075 FAM208AQ9UK61 1670 aaKnown RBP18.26■□□□□ 0.51
PMS1-201ENST00000342075 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
PMS1-201ENST00000342075 NEFMP07197 916 aa18.25■□□□□ 0.51
PMS1-201ENST00000342075 TOM1L2Q6ZVM7 507 aa18.24■□□□□ 0.51
PMS1-201ENST00000342075 MCM10Q7L590 875 aa18.24■□□□□ 0.51
PMS1-201ENST00000342075 LRP6O75581 1613 aa18.24■□□□□ 0.51
PMS1-201ENST00000342075 GOLGA2Q08379 1002 aa18.23■□□□□ 0.51
PMS1-201ENST00000342075 PNNQ9H307 717 aaKnown RBP18.23■□□□□ 0.51
PMS1-201ENST00000342075 PLCH1Q4KWH8 1693 aa18.23■□□□□ 0.51
PMS1-201ENST00000342075 MEGF6O75095 1541 aa18.23■□□□□ 0.51
PMS1-201ENST00000342075 JCADQ9P266 1359 aa18.23■□□□□ 0.51
PMS1-201ENST00000342075 WDR17Q8IZU2 1322 aa18.23■□□□□ 0.51
PMS1-201ENST00000342075 EVA1CP58658 441 aa18.23■□□□□ 0.51
PMS1-201ENST00000342075 COL14A1Q05707 1796 aaKnown RBP18.22■□□□□ 0.51
PMS1-201ENST00000342075 TSR2Q969E8 191 aaKnown RBP18.22■□□□□ 0.51
PMS1-201ENST00000342075 NCAPD2Q15021 1401 aa18.21■□□□□ 0.51
PMS1-201ENST00000342075 C8orf37Q96NL8 207 aa18.21■□□□□ 0.51
PMS1-201ENST00000342075 ABCC6O95255 1503 aa18.21■□□□□ 0.51
PMS1-201ENST00000342075 DUSP27Q5VZP5 1158 aa18.21■□□□□ 0.51
PMS1-201ENST00000342075 SLFN5Q08AF3 891 aa18.2■□□□□ 0.5
PMS1-201ENST00000342075 LAS1LQ9Y4W2 734 aaKnown RBP18.2■□□□□ 0.5
PMS1-201ENST00000342075 CCDC27Q2M243 656 aa18.19■□□□□ 0.5
PMS1-201ENST00000342075 SUPT16HQ9Y5B9 1047 aaKnown RBP18.17■□□□□ 0.5
PMS1-201ENST00000342075 PDE3BQ13370 1112 aa18.16■□□□□ 0.5
PMS1-201ENST00000342075 RAPGEF4Q8WZA2 1011 aa18.16■□□□□ 0.5
PMS1-201ENST00000342075 MIS18AQ9NYP9 233 aa18.16■□□□□ 0.5
PMS1-201ENST00000342075 ZNF530Q6P9A1 599 aaPredicted RBP18.16■□□□□ 0.5
PMS1-201ENST00000342075 NRAPQ86VF7 1730 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms