RNA–Protein interactions for RNA: ENST00000340171.6

C3orf33-201, Transcript of chromosome 3 open reading frame 33, humanhuman

TSL 1 (best) BASIC

Gene C3orf33, Length 1,884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf33-201ENST00000340171 PRDM11Q9NQV5 511 aa26.79■■□□□ 1.88
C3orf33-201ENST00000340171 ADAMTS8Q9UP79 889 aa26.79■■□□□ 1.88
C3orf33-201ENST00000340171 LRP6O75581 1613 aa26.77■■□□□ 1.88
C3orf33-201ENST00000340171 HSP90AB2PQ58FF8 381 aa26.76■■□□□ 1.88
C3orf33-201ENST00000340171 SMG6Q86US8 1419 aaKnown RBP26.76■■□□□ 1.88
C3orf33-201ENST00000340171 HOXC9P31274 260 aa26.75■■□□□ 1.87
C3orf33-201ENST00000340171 AXIN2Q9Y2T1 843 aa26.74■■□□□ 1.87
C3orf33-201ENST00000340171 FLT4P35916 1363 aa26.74■■□□□ 1.87
C3orf33-201ENST00000340171 CDK12Q9NYV4 1490 aaPredicted RBP26.74■■□□□ 1.87
C3orf33-201ENST00000340171 LTV1Q96GA3 475 aaPredicted RBP26.74■■□□□ 1.87
C3orf33-201ENST00000340171 CPDO75976 1380 aa26.74■■□□□ 1.87
C3orf33-201ENST00000340171 INSRP06213 1382 aa26.74■■□□□ 1.87
C3orf33-201ENST00000340171 FAM83GA6ND36 823 aa26.73■■□□□ 1.87
C3orf33-201ENST00000340171 SPATA31A6Q5VVP1 1343 aa26.73■■□□□ 1.87
C3orf33-201ENST00000340171 COL18A1P39060 1754 aa26.73■■□□□ 1.87
C3orf33-201ENST00000340171 COL3A1P02461 1466 aaPredicted RBP26.7■■□□□ 1.87
C3orf33-201ENST00000340171 IP6K1Q92551 441 aa26.7■■□□□ 1.87
C3orf33-201ENST00000340171 BLMP54132 1417 aaPredicted RBP26.69■■□□□ 1.86
C3orf33-201ENST00000340171 RTL1A6NKG5 1358 aa26.69■■□□□ 1.86
C3orf33-201ENST00000340171 C8orf37Q96NL8 207 aa26.69■■□□□ 1.86
C3orf33-201ENST00000340171 ZBED9Q6R2W3 1325 aa26.68■■□□□ 1.86
C3orf33-201ENST00000340171 NUDCQ9Y266 331 aa26.68■■□□□ 1.86
C3orf33-201ENST00000340171 LMO7Q8WWI1 1683 aa26.68■■□□□ 1.86
C3orf33-201ENST00000340171 PLCH1Q4KWH8 1693 aa26.68■■□□□ 1.86
C3orf33-201ENST00000340171 CAMTA1Q9Y6Y1 1673 aa26.68■■□□□ 1.86
C3orf33-201ENST00000340171 MEX3CQ5U5Q3 659 aaKnown RBP26.68■■□□□ 1.86
C3orf33-201ENST00000340171 COL14A1Q05707 1796 aaKnown RBP26.67■■□□□ 1.86
C3orf33-201ENST00000340171 SENP3-EIF4A1A0A087X0R7 540 aa26.67■■□□□ 1.86
C3orf33-201ENST00000340171 DIAPH1O60610 1272 aaKnown RBP26.67■■□□□ 1.86
C3orf33-201ENST00000340171 EIF4A2Q14240 407 aaKnown RBP26.66■■□□□ 1.86
C3orf33-201ENST00000340171 BTG4Q9NY30 223 aa26.66■■□□□ 1.86
C3orf33-201ENST00000340171 RGPD2P0DJD1 1756 aa26.65■■□□□ 1.86
C3orf33-201ENST00000340171 STRN4Q9NRL3 753 aa26.65■■□□□ 1.86
C3orf33-201ENST00000340171 KIF24Q5T7B8 1368 aa26.65■■□□□ 1.86
C3orf33-201ENST00000340171 ANKRD24Q8TF21 1146 aa26.64■■□□□ 1.86
C3orf33-201ENST00000340171 U2SURPO15042 1029 aaKnown RBP26.64■■□□□ 1.85
C3orf33-201ENST00000340171 ILDR1Q86SU0 546 aaPredicted RBP26.64■■□□□ 1.85
C3orf33-201ENST00000340171 U2AF1L5P0DN76 240 aaPredicted RBP26.63■■□□□ 1.85
C3orf33-201ENST00000340171 U2AF1Q01081 240 aaKnown RBP eCLIP26.63■■□□□ 1.85
C3orf33-201ENST00000340171 NGLY1Q96IV0 654 aa26.62■■□□□ 1.85
C3orf33-201ENST00000340171 IL13P35225 146 aa26.62■■□□□ 1.85
C3orf33-201ENST00000340171 CCDC146Q8IYE0 955 aa26.62■■□□□ 1.85
C3orf33-201ENST00000340171 COL5A2P05997 1499 aaPredicted RBP26.61■■□□□ 1.85
C3orf33-201ENST00000340171 CSB-PGBD3P0DP91 1061 aa26.61■■□□□ 1.85
C3orf33-201ENST00000340171 ERBB3P21860 1342 aa26.61■■□□□ 1.85
C3orf33-201ENST00000340171 ABCC6O95255 1503 aa26.6■■□□□ 1.85
C3orf33-201ENST00000340171 USHBP1Q8N6Y0 703 aa26.59■■□□□ 1.85
C3orf33-201ENST00000340171 SALL2Q9Y467 1007 aaPredicted RBP26.59■■□□□ 1.85
C3orf33-201ENST00000340171 EVA1CP58658 441 aa26.58■■□□□ 1.85
C3orf33-201ENST00000340171 NRAPQ86VF7 1730 aa26.57■■□□□ 1.84
C3orf33-201ENST00000340171 HMOX1P09601 288 aa26.56■■□□□ 1.84
C3orf33-201ENST00000340171 LARP1Q6PKG0 1096 aaKnown RBP26.56■■□□□ 1.84
C3orf33-201ENST00000340171 SLIT2O94813 1529 aa26.56■■□□□ 1.84
C3orf33-201ENST00000340171 NBPF6Q5VWK0 638 aa26.55■■□□□ 1.84
C3orf33-201ENST00000340171 NBPF4Q96M43 638 aa26.55■■□□□ 1.84
C3orf33-201ENST00000340171 EYA1Q99502 592 aa26.55■■□□□ 1.84
C3orf33-201ENST00000340171 NLRP2Q9NX02 1062 aa26.55■■□□□ 1.84
C3orf33-201ENST00000340171 RGPD1P0DJD0 1748 aa26.55■■□□□ 1.84
C3orf33-201ENST00000340171 RUNDC1Q96C34 613 aa26.55■■□□□ 1.84
C3orf33-201ENST00000340171 NWD2Q9ULI1 1742 aa26.54■■□□□ 1.84
C3orf33-201ENST00000340171 AEBP1Q8IUX7 1158 aa26.54■■□□□ 1.84
C3orf33-201ENST00000340171 USP35Q9P2H5 1018 aa26.54■■□□□ 1.84
C3orf33-201ENST00000340171 TOM1L2Q6ZVM7 507 aa26.53■■□□□ 1.84
C3orf33-201ENST00000340171 AFF2P51816 1311 aa26.53■■□□□ 1.84
C3orf33-201ENST00000340171 WDR17Q8IZU2 1322 aa26.53■■□□□ 1.84
C3orf33-201ENST00000340171 APAF1O14727 1248 aa26.53■■□□□ 1.84
C3orf33-201ENST00000340171 BCL9LQ86UU0 1499 aa26.51■■□□□ 1.83
C3orf33-201ENST00000340171 SULT6B1Q6IMI4 303 aa26.51■■□□□ 1.83
C3orf33-201ENST00000340171 USP21Q9UK80 565 aa26.51■■□□□ 1.83
C3orf33-201ENST00000340171 FAM208AQ9UK61 1670 aaKnown RBP26.5■■□□□ 1.83
C3orf33-201ENST00000340171 PNNQ9H307 717 aaKnown RBP26.5■■□□□ 1.83
C3orf33-201ENST00000340171 IGSF1Q8N6C5 1336 aa26.49■■□□□ 1.83
C3orf33-201ENST00000340171 FNBP4Q8N3X1 1017 aaPredicted RBP26.49■■□□□ 1.83
C3orf33-201ENST00000340171 CCDC9Q9Y3X0 531 aaKnown RBP26.49■■□□□ 1.83
C3orf33-201ENST00000340171 FCHSD2O94868 740 aa26.48■■□□□ 1.83
C3orf33-201ENST00000340171 UNC5CLQ8IV45 518 aa26.48■■□□□ 1.83
C3orf33-201ENST00000340171 CRB1P82279 1406 aa26.46■■□□□ 1.83
C3orf33-201ENST00000340171 TCP11L2Q8N4U5 519 aa26.46■■□□□ 1.83
C3orf33-201ENST00000340171 NGEFQ8N5V2 710 aa26.45■■□□□ 1.83
C3orf33-201ENST00000340171 PLEKHF1Q96S99 279 aa26.45■■□□□ 1.83
C3orf33-201ENST00000340171 MAPK8IP3Q9UPT6 1336 aa26.45■■□□□ 1.82
C3orf33-201ENST00000340171 PRKAR2BP31323 418 aa26.44■■□□□ 1.82
C3orf33-201ENST00000340171 RSPH6AQ9H0K4 717 aa26.44■■□□□ 1.82
C3orf33-201ENST00000340171 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.43■■□□□ 1.82
C3orf33-201ENST00000340171 NEFMP07197 916 aa26.42■■□□□ 1.82
C3orf33-201ENST00000340171 PDE3BQ13370 1112 aa26.42■■□□□ 1.82
C3orf33-201ENST00000340171 NEUROD2Q15784 382 aa26.42■■□□□ 1.82
C3orf33-201ENST00000340171 CARD10Q9BWT7 1032 aa26.41■■□□□ 1.82
C3orf33-201ENST00000340171 RRP7AQ9Y3A4 280 aaKnown RBP26.41■■□□□ 1.82
C3orf33-201ENST00000340171 KDRP35968 1356 aa26.4■■□□□ 1.82
C3orf33-201ENST00000340171 MEGF6O75095 1541 aa26.39■■□□□ 1.81
C3orf33-201ENST00000340171 SPATA31A1Q5TZJ5 1347 aa26.38■■□□□ 1.81
C3orf33-201ENST00000340171 SPATA31A5Q5VU36 1347 aa26.38■■□□□ 1.81
C3orf33-201ENST00000340171 SPATA31A7Q8IWB4 1347 aa26.38■■□□□ 1.81
C3orf33-201ENST00000340171 NCAPD2Q15021 1401 aa26.38■■□□□ 1.81
C3orf33-201ENST00000340171 VPS72Q15906 364 aa26.38■■□□□ 1.81
C3orf33-201ENST00000340171 PHACTR3Q96KR7 559 aa26.38■■□□□ 1.81
C3orf33-201ENST00000340171 ZNF521Q96K83 1311 aa26.37■■□□□ 1.81
C3orf33-201ENST00000340171 QTRT2Q9H974 415 aaKnown RBP26.36■■□□□ 1.81
C3orf33-201ENST00000340171 TMPOP42166 694 aaKnown RBP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms