RNA–Protein interactions for RNA: ENST00000339901.8

SECISBP2-201, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SECISBP2, Length 3,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-201ENST00000339901 VAMP4O75379 141 aa17.01■□□□□ 0.31
SECISBP2-201ENST00000339901 PHACTR3Q96KR7 559 aa17.01■□□□□ 0.31
SECISBP2-201ENST00000339901 MRPL50Q8N5N7 158 aaKnown RBP17■□□□□ 0.31
SECISBP2-201ENST00000339901 GNAI1P63096 354 aa16.99■□□□□ 0.31
SECISBP2-201ENST00000339901 CHMP4BQ9H444 224 aaKnown RBP16.99■□□□□ 0.31
SECISBP2-201ENST00000339901 UBR1Q8IWV7 1749 aa16.99■□□□□ 0.31
SECISBP2-201ENST00000339901 ZBTB7BO15156 539 aaPredicted RBP16.98■□□□□ 0.31
SECISBP2-201ENST00000339901 EMILIN1Q9Y6C2 1016 aa16.98■□□□□ 0.31
SECISBP2-201ENST00000339901 NALCNQ8IZF0 1738 aa16.97■□□□□ 0.31
SECISBP2-201ENST00000339901 ABCC4O15439 1325 aa16.97■□□□□ 0.31
SECISBP2-201ENST00000339901 FBLN1P23142 703 aa16.97■□□□□ 0.31
SECISBP2-201ENST00000339901 C22orf23Q9BZE7 217 aa16.97■□□□□ 0.31
SECISBP2-201ENST00000339901 KIF24Q5T7B8 1368 aa16.97■□□□□ 0.31
SECISBP2-201ENST00000339901 NME9Q86XW9 330 aa16.96■□□□□ 0.31
SECISBP2-201ENST00000339901 NUDT16Q96DE0 195 aaKnown RBP16.96■□□□□ 0.31
SECISBP2-201ENST00000339901 LMOD3Q0VAK6 560 aa16.96■□□□□ 0.31
SECISBP2-201ENST00000339901 CCDC61Q9Y6R9 512 aa16.96■□□□□ 0.31
SECISBP2-201ENST00000339901 KIF13AQ9H1H9 1805 aa16.95■□□□□ 0.3
SECISBP2-201ENST00000339901 RGPD1P0DJD0 1748 aa16.95■□□□□ 0.3
SECISBP2-201ENST00000339901 CFAP44Q96MT7 982 aa16.95■□□□□ 0.3
SECISBP2-201ENST00000339901 ZNF692Q9BU19 519 aaPredicted RBP16.95■□□□□ 0.3
SECISBP2-201ENST00000339901 HMOX1P09601 288 aa16.95■□□□□ 0.3
SECISBP2-201ENST00000339901 CHD1LQ86WJ1 897 aa16.95■□□□□ 0.3
SECISBP2-201ENST00000339901 GCC1Q96CN9 775 aa16.95■□□□□ 0.3
SECISBP2-201ENST00000339901 MBIPQ9NS73 344 aa16.95■□□□□ 0.3
SECISBP2-201ENST00000339901 RBM25P49756 843 aaKnown RBP16.94■□□□□ 0.3
SECISBP2-201ENST00000339901 IL27Q8NEV9 243 aa16.94■□□□□ 0.3
SECISBP2-201ENST00000339901 COG3Q96JB2 828 aa16.94■□□□□ 0.3
SECISBP2-201ENST00000339901 HDGFP51858 240 aaKnown RBP16.93■□□□□ 0.3
SECISBP2-201ENST00000339901 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.93■□□□□ 0.3
SECISBP2-201ENST00000339901 NCOA3Q9Y6Q9 1424 aa16.93■□□□□ 0.3
SECISBP2-201ENST00000339901 TSPYL6Q8N831 410 aa16.93■□□□□ 0.3
SECISBP2-201ENST00000339901 BMP2KLQ5H9B9 411 aa16.92■□□□□ 0.3
SECISBP2-201ENST00000339901 SLKQ9H2G2 1235 aaPredicted RBP16.92■□□□□ 0.3
SECISBP2-201ENST00000339901 ZRANB1Q9UGI0 708 aa16.92■□□□□ 0.3
SECISBP2-201ENST00000339901 TXNDC2Q86VQ3 553 aa16.91■□□□□ 0.3
SECISBP2-201ENST00000339901 TMEM2Q9UHN6 1383 aa16.91■□□□□ 0.3
SECISBP2-201ENST00000339901 THUMPD2Q9BTF0 503 aaKnown RBP16.91■□□□□ 0.3
SECISBP2-201ENST00000339901 OVOS2A0A0J9YW53 1432 aa16.91■□□□□ 0.3
SECISBP2-201ENST00000339901 OVOS2Q6IE36 1432 aa16.91■□□□□ 0.3
SECISBP2-201ENST00000339901 ADAMTS13Q76LX8 1427 aa16.91■□□□□ 0.3
SECISBP2-201ENST00000339901 PRR36Q9H6K5 1346 aa16.91■□□□□ 0.3
SECISBP2-201ENST00000339901 MFAP1P55081 439 aaKnown RBP16.9■□□□□ 0.3
SECISBP2-201ENST00000339901 TNRQ92752 1358 aa16.9■□□□□ 0.3
SECISBP2-201ENST00000339901 TWISTNBQ3B726 338 aaPredicted RBP16.9■□□□□ 0.3
SECISBP2-201ENST00000339901 SNX21Q969T3 373 aa16.9■□□□□ 0.3
SECISBP2-201ENST00000339901 PEAK1Q9H792 1746 aa16.9■□□□□ 0.3
SECISBP2-201ENST00000339901 SIRT2Q8IXJ6 389 aa16.88■□□□□ 0.29
SECISBP2-201ENST00000339901 API5Q9BZZ5 524 aaKnown RBP16.88■□□□□ 0.29
SECISBP2-201ENST00000339901 ROBO2Q9HCK4 1378 aa16.88■□□□□ 0.29
SECISBP2-201ENST00000339901 DDIT3P35638 169 aa16.88■□□□□ 0.29
SECISBP2-201ENST00000339901 C8orf58Q8NAV2 365 aa16.88■□□□□ 0.29
SECISBP2-201ENST00000339901 LNPKQ9C0E8 428 aa16.88■□□□□ 0.29
SECISBP2-201ENST00000339901 USP31Q70CQ4 1352 aa16.87■□□□□ 0.29
SECISBP2-201ENST00000339901 NCKAP5LQ9HCH0 1330 aa16.87■□□□□ 0.29
SECISBP2-201ENST00000339901 RRS1Q15050 365 aaKnown RBP16.87■□□□□ 0.29
SECISBP2-201ENST00000339901 PLEKHG1Q9ULL1 1385 aa16.86■□□□□ 0.29
SECISBP2-201ENST00000339901 PLEKHG3A1L390 1219 aa16.86■□□□□ 0.29
SECISBP2-201ENST00000339901 CHMP5Q9NZZ3 219 aa16.86■□□□□ 0.29
SECISBP2-201ENST00000339901 BRPF3Q9ULD4 1205 aa16.86■□□□□ 0.29
SECISBP2-201ENST00000339901 SSH2Q76I76 1423 aa16.86■□□□□ 0.29
SECISBP2-201ENST00000339901 FMN2Q9NZ56 1722 aa16.86■□□□□ 0.29
SECISBP2-201ENST00000339901 KIAA0232Q92628 1395 aa16.86■□□□□ 0.29
SECISBP2-201ENST00000339901 MLECQ14165 292 aa16.85■□□□□ 0.29
SECISBP2-201ENST00000339901 RGS12O14924 1447 aa16.85■□□□□ 0.29
SECISBP2-201ENST00000339901 USP6P35125 1406 aa16.85■□□□□ 0.29
SECISBP2-201ENST00000339901 TTC21BQ7Z4L5 1316 aa16.85■□□□□ 0.29
SECISBP2-201ENST00000339901 INTS3Q68E01 1043 aaKnown RBP16.85■□□□□ 0.29
SECISBP2-201ENST00000339901 EIF4A2Q14240 407 aaKnown RBP16.84■□□□□ 0.29
SECISBP2-201ENST00000339901 RIMS1Q86UR5 1692 aaKnown RBP16.84■□□□□ 0.29
SECISBP2-201ENST00000339901 ANKRD45Q5TZF3 282 aa16.83■□□□□ 0.29
SECISBP2-201ENST00000339901 CHL1O00533 1208 aa16.83■□□□□ 0.28
SECISBP2-201ENST00000339901 MCM4P33991 863 aa16.83■□□□□ 0.28
SECISBP2-201ENST00000339901 HAP1P54257 671 aaPredicted RBP16.83■□□□□ 0.28
SECISBP2-201ENST00000339901 FAM83GA6ND36 823 aa16.83■□□□□ 0.28
SECISBP2-201ENST00000339901 HSCBQ8IWL3 235 aa16.83■□□□□ 0.28
SECISBP2-201ENST00000339901 KIF2CQ99661 725 aa16.82■□□□□ 0.28
SECISBP2-201ENST00000339901 ESF1Q9H501 851 aaKnown RBP16.81■□□□□ 0.28
SECISBP2-201ENST00000339901 C1orf115Q9H7X2 142 aa16.81■□□□□ 0.28
SECISBP2-201ENST00000339901 CRB1P82279 1406 aa16.81■□□□□ 0.28
SECISBP2-201ENST00000339901 ATP10DQ9P241 1426 aa16.81■□□□□ 0.28
SECISBP2-201ENST00000339901 ACEP12821 1306 aa16.8■□□□□ 0.28
SECISBP2-201ENST00000339901 DCTPP1Q9H773 170 aa16.8■□□□□ 0.28
SECISBP2-201ENST00000339901 ARHGEF10O15013 1369 aa16.8■□□□□ 0.28
SECISBP2-201ENST00000339901 ELL2O00472 640 aaPredicted RBP16.8■□□□□ 0.28
SECISBP2-201ENST00000339901 SLIT1O75093 1534 aa16.79■□□□□ 0.28
SECISBP2-201ENST00000339901 EIF5BO60841 1220 aaKnown RBP16.79■□□□□ 0.28
SECISBP2-201ENST00000339901 CIZ1Q9ULV3 898 aaPredicted RBP16.79■□□□□ 0.28
SECISBP2-201ENST00000339901 PTPRUQ92729 1446 aa16.79■□□□□ 0.28
SECISBP2-201ENST00000339901 DCTN1Q14203 1278 aa16.79■□□□□ 0.28
SECISBP2-201ENST00000339901 TBC1D9Q6ZT07 1266 aa16.79■□□□□ 0.28
SECISBP2-201ENST00000339901 AEBP1Q8IUX7 1158 aa16.79■□□□□ 0.28
SECISBP2-201ENST00000339901 USP54Q70EL1 1684 aa16.79■□□□□ 0.28
SECISBP2-201ENST00000339901 PTPRCP08575 1304 aa16.79■□□□□ 0.28
SECISBP2-201ENST00000339901 L1TD1Q5T7N2 865 aaKnown RBP16.78■□□□□ 0.28
SECISBP2-201ENST00000339901 SULT6B1Q6IMI4 303 aa16.78■□□□□ 0.28
SECISBP2-201ENST00000339901 ARHGAP23Q9P227 1491 aa16.78■□□□□ 0.28
SECISBP2-201ENST00000339901 LRRC37A3O60309 1634 aa16.77■□□□□ 0.28
SECISBP2-201ENST00000339901 FSD2A1L4K1 749 aa16.77■□□□□ 0.28
SECISBP2-201ENST00000339901 ANKRD44Q8N8A2 993 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms