RNA–Protein interactions for RNA: ENST00000339089.10

PHF20-201, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-201ENST00000339089 ZBTB7CA1YPR0 619 aa17.59■□□□□ 0.41
PHF20-201ENST00000339089 RGPD5Q99666 1765 aa17.58■□□□□ 0.41
PHF20-201ENST00000339089 CDK12Q9NYV4 1490 aaPredicted RBP17.58■□□□□ 0.41
PHF20-201ENST00000339089 MAP3K19Q56UN5 1328 aa17.58■□□□□ 0.4
PHF20-201ENST00000339089 SPATA31A5Q5VU36 1347 aa17.58■□□□□ 0.4
PHF20-201ENST00000339089 SPATA31A7Q8IWB4 1347 aa17.58■□□□□ 0.4
PHF20-201ENST00000339089 RGS12O14924 1447 aa17.58■□□□□ 0.4
PHF20-201ENST00000339089 ABCC6O95255 1503 aa17.57■□□□□ 0.4
PHF20-201ENST00000339089 LARP1Q6PKG0 1096 aaKnown RBP17.57■□□□□ 0.4
PHF20-201ENST00000339089 STRN4Q9NRL3 753 aa17.57■□□□□ 0.4
PHF20-201ENST00000339089 ANKRD26Q9UPS8 1709 aa17.56■□□□□ 0.4
PHF20-201ENST00000339089 ONECUT3O60422 494 aaPredicted RBP17.56■□□□□ 0.4
PHF20-201ENST00000339089 SPATA31A1Q5TZJ5 1347 aa17.56■□□□□ 0.4
PHF20-201ENST00000339089 RRS1Q15050 365 aaKnown RBP17.55■□□□□ 0.4
PHF20-201ENST00000339089 PEAK1Q9H792 1746 aa17.55■□□□□ 0.4
PHF20-201ENST00000339089 IP6K1Q92551 441 aa17.54■□□□□ 0.4
PHF20-201ENST00000339089 KNSTRNQ9Y448 316 aa17.54■□□□□ 0.4
PHF20-201ENST00000339089 NSD2O96028 1365 aa17.53■□□□□ 0.4
PHF20-201ENST00000339089 EVA1CP58658 441 aa17.53■□□□□ 0.4
PHF20-201ENST00000339089 WDR17Q8IZU2 1322 aa17.52■□□□□ 0.4
PHF20-201ENST00000339089 HOXC9P31274 260 aa17.52■□□□□ 0.4
PHF20-201ENST00000339089 EP400Q96L91 3159 aa17.51■□□□□ 0.39
PHF20-201ENST00000339089 CCDC9Q9Y3X0 531 aaKnown RBP17.51■□□□□ 0.39
PHF20-201ENST00000339089 EMILIN1Q9Y6C2 1016 aa17.51■□□□□ 0.39
PHF20-201ENST00000339089 ERBB3P21860 1342 aa17.51■□□□□ 0.39
PHF20-201ENST00000339089 CRB1P82279 1406 aa17.51■□□□□ 0.39
PHF20-201ENST00000339089 BLMP54132 1417 aaPredicted RBP17.5■□□□□ 0.39
PHF20-201ENST00000339089 FAM98CQ17RN3 349 aaKnown RBP17.5■□□□□ 0.39
PHF20-201ENST00000339089 POLKQ9UBT6 870 aa17.5■□□□□ 0.39
PHF20-201ENST00000339089 THSD7AQ9UPZ6 1657 aa17.5■□□□□ 0.39
PHF20-201ENST00000339089 NPC1L1Q9UHC9 1359 aa17.5■□□□□ 0.39
PHF20-201ENST00000339089 RTL1A6NKG5 1358 aa17.49■□□□□ 0.39
PHF20-201ENST00000339089 ANKRD24Q8TF21 1146 aa17.49■□□□□ 0.39
PHF20-201ENST00000339089 TNNT2P45379 298 aaPredicted RBP17.48■□□□□ 0.39
PHF20-201ENST00000339089 HSP90AB2PQ58FF8 381 aa17.48■□□□□ 0.39
PHF20-201ENST00000339089 SEPT12Q8IYM1 358 aa17.48■□□□□ 0.39
PHF20-201ENST00000339089 USP35Q9P2H5 1018 aa17.48■□□□□ 0.39
PHF20-201ENST00000339089 MAP2P11137 1827 aaKnown RBP17.48■□□□□ 0.39
PHF20-201ENST00000339089 AMPHP49418 695 aa17.48■□□□□ 0.39
PHF20-201ENST00000339089 BARGINQ6ZT62 677 aa17.48■□□□□ 0.39
PHF20-201ENST00000339089 KIF24Q5T7B8 1368 aa17.47■□□□□ 0.39
PHF20-201ENST00000339089 MORC1Q86VD1 984 aa17.47■□□□□ 0.39
PHF20-201ENST00000339089 TCP11L2Q8N4U5 519 aa17.47■□□□□ 0.39
PHF20-201ENST00000339089 CARD10Q9BWT7 1032 aa17.47■□□□□ 0.39
PHF20-201ENST00000339089 BRWD3Q6RI45 1802 aa17.47■□□□□ 0.39
PHF20-201ENST00000339089 CC2D1BQ5T0F9 858 aaKnown RBP17.46■□□□□ 0.39
PHF20-201ENST00000339089 TOM1L2Q6ZVM7 507 aa17.46■□□□□ 0.39
PHF20-201ENST00000339089 INSRP06213 1382 aa17.46■□□□□ 0.39
PHF20-201ENST00000339089 SMG6Q86US8 1419 aaKnown RBP17.46■□□□□ 0.39
PHF20-201ENST00000339089 FLT4P35916 1363 aa17.46■□□□□ 0.38
PHF20-201ENST00000339089 DISP2A7MBM2 1401 aa17.44■□□□□ 0.38
PHF20-201ENST00000339089 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
PHF20-201ENST00000339089 THRAP3Q9Y2W1 955 aaKnown RBP17.44■□□□□ 0.38
PHF20-201ENST00000339089 SOCS7O14512 581 aa17.44■□□□□ 0.38
PHF20-201ENST00000339089 CSB-PGBD3P0DP91 1061 aa17.44■□□□□ 0.38
PHF20-201ENST00000339089 RGPD2P0DJD1 1756 aa17.44■□□□□ 0.38
PHF20-201ENST00000339089 DDX10Q13206 875 aaKnown RBP17.43■□□□□ 0.38
PHF20-201ENST00000339089 FAM208AQ9UK61 1670 aaKnown RBP17.42■□□□□ 0.38
PHF20-201ENST00000339089 WNK3Q9BYP7 1800 aa17.42■□□□□ 0.38
PHF20-201ENST00000339089 NBPF6Q5VWK0 638 aa17.42■□□□□ 0.38
PHF20-201ENST00000339089 NBPF4Q96M43 638 aa17.42■□□□□ 0.38
PHF20-201ENST00000339089 NLRP2Q9NX02 1062 aa17.42■□□□□ 0.38
PHF20-201ENST00000339089 PPM1GO15355 546 aaPredicted RBP17.41■□□□□ 0.38
PHF20-201ENST00000339089 PARP4Q9UKK3 1724 aaKnown RBP17.4■□□□□ 0.38
PHF20-201ENST00000339089 CNGB1Q14028 1251 aaPredicted RBP17.39■□□□□ 0.37
PHF20-201ENST00000339089 NCAPD2Q15021 1401 aa17.39■□□□□ 0.37
PHF20-201ENST00000339089 KRT27Q7Z3Y8 459 aa17.39■□□□□ 0.37
PHF20-201ENST00000339089 LRRC37A3O60309 1634 aa17.38■□□□□ 0.37
PHF20-201ENST00000339089 ZNF316A6NFI3 1004 aaPredicted RBP17.38■□□□□ 0.37
PHF20-201ENST00000339089 EIF4A2Q14240 407 aaKnown RBP17.38■□□□□ 0.37
PHF20-201ENST00000339089 MTHFSP49914 203 aa17.37■□□□□ 0.37
PHF20-201ENST00000339089 FAM182BQ5T319 152 aa17.37■□□□□ 0.37
PHF20-201ENST00000339089 A0A0G2JS52 829 aa17.37■□□□□ 0.37
PHF20-201ENST00000339089 MYT1Q01538 1121 aa17.37■□□□□ 0.37
PHF20-201ENST00000339089 USHBP1Q8N6Y0 703 aa17.37■□□□□ 0.37
PHF20-201ENST00000339089 UPF1Q92900 1129 aaKnown RBP eCLIP17.36■□□□□ 0.375e-6■■■■□ 20.6
PHF20-201ENST00000339089 EYA1Q99502 592 aa17.35■□□□□ 0.37
PHF20-201ENST00000339089 MEGF6O75095 1541 aa17.35■□□□□ 0.37
PHF20-201ENST00000339089 CDCA7Q9BWT1 371 aaPredicted RBP17.35■□□□□ 0.37
PHF20-201ENST00000339089 PARD3Q8TEW0 1356 aa17.34■□□□□ 0.37
PHF20-201ENST00000339089 IL2RBP14784 551 aa17.34■□□□□ 0.37
PHF20-201ENST00000339089 COL3A1P02461 1466 aaPredicted RBP17.34■□□□□ 0.37
PHF20-201ENST00000339089 IL13P35225 146 aa17.33■□□□□ 0.37
PHF20-201ENST00000339089 PPP2R1AP30153 589 aa17.33■□□□□ 0.36
PHF20-201ENST00000339089 DDB1Q16531 1140 aa17.33■□□□□ 0.36
PHF20-201ENST00000339089 MARCH10Q8NA82 808 aaPredicted RBP17.33■□□□□ 0.36
PHF20-201ENST00000339089 RGPD1P0DJD0 1748 aa17.32■□□□□ 0.36
PHF20-201ENST00000339089 IGSF1Q8N6C5 1336 aa17.31■□□□□ 0.36
PHF20-201ENST00000339089 TNS2Q63HR2 1409 aa17.31■□□□□ 0.36
PHF20-201ENST00000339089 PDE3BQ13370 1112 aa17.3■□□□□ 0.36
PHF20-201ENST00000339089 OVOS2A0A0G2JMS6 1433 aa17.3■□□□□ 0.36
PHF20-201ENST00000339089 EXOC5O00471 708 aa17.29■□□□□ 0.36
PHF20-201ENST00000339089 SHANK3Q9BYB0 1731 aa17.29■□□□□ 0.36
PHF20-201ENST00000339089 AEBP1Q8IUX7 1158 aa17.28■□□□□ 0.36
PHF20-201ENST00000339089 BCL9O00512 1426 aa17.26■□□□□ 0.35
PHF20-201ENST00000339089 FAM196AQ6ZSG2 479 aa17.26■□□□□ 0.35
PHF20-201ENST00000339089 KDRP35968 1356 aa17.26■□□□□ 0.35
PHF20-201ENST00000339089 PTF1AQ7RTS3 328 aa17.25■□□□□ 0.35
PHF20-201ENST00000339089 DIAPH1O60610 1272 aaKnown RBP17.24■□□□□ 0.35
PHF20-201ENST00000339089 ZCRB1Q8TBF4 217 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms