RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 CA8P35219 290 aa13.93□□□□□ -0.18
SHANK2-201ENST00000338508 DHX8Q14562 1220 aaKnown RBP13.93□□□□□ -0.18
SHANK2-201ENST00000338508 DESP17661 470 aa13.92□□□□□ -0.18
SHANK2-201ENST00000338508 TDO2P48775 406 aa13.92□□□□□ -0.18
SHANK2-201ENST00000338508 TRIM22Q8IYM9 498 aa13.92□□□□□ -0.18
SHANK2-201ENST00000338508 VPS8Q8N3P4 1428 aa13.92□□□□□ -0.18
SHANK2-201ENST00000338508 LIG1P18858 919 aa13.92□□□□□ -0.18
SHANK2-201ENST00000338508 ZNF219Q9P2Y4 722 aaPredicted RBP13.92□□□□□ -0.18
SHANK2-201ENST00000338508 CCDC18Q5T9S5 1454 aa13.92□□□□□ -0.18
SHANK2-201ENST00000338508 NF2P35240 595 aa13.91□□□□□ -0.18
SHANK2-201ENST00000338508 PUS7Q96PZ0 661 aaKnown RBP13.91□□□□□ -0.18
SHANK2-201ENST00000338508 LUC7LQ9NQ29 371 aaKnown RBP13.91□□□□□ -0.18
SHANK2-201ENST00000338508 RAI14Q9P0K7 980 aa13.91□□□□□ -0.18
SHANK2-201ENST00000338508 TNMDQ9H2S6 317 aa13.91□□□□□ -0.18
SHANK2-201ENST00000338508 NACAP1Q9BZK3 213 aa13.9□□□□□ -0.18
SHANK2-201ENST00000338508 WIZO95785 1651 aa13.9□□□□□ -0.18
SHANK2-201ENST00000338508 CCDC57Q2TAC2 916 aa13.9□□□□□ -0.18
SHANK2-201ENST00000338508 KIAA1328Q86T90 577 aa13.9□□□□□ -0.18
SHANK2-201ENST00000338508 DNA2P51530 1060 aa13.9□□□□□ -0.18
SHANK2-201ENST00000338508 TRAK2O60296 914 aa13.9□□□□□ -0.18
SHANK2-201ENST00000338508 TNNT1P13805 278 aa13.89□□□□□ -0.19
SHANK2-201ENST00000338508 PROSER2Q86WR7 435 aaPredicted RBP13.89□□□□□ -0.19
SHANK2-201ENST00000338508 GOLGA6L7A0A1B0GV03 622 aa13.89□□□□□ -0.19
SHANK2-201ENST00000338508 PLEKHO1Q53GL0 409 aaPredicted RBP13.89□□□□□ -0.19
SHANK2-201ENST00000338508 UBA5Q9GZZ9 404 aa13.89□□□□□ -0.19
SHANK2-201ENST00000338508 LETM1O95202 739 aaPredicted RBP13.89□□□□□ -0.19
SHANK2-201ENST00000338508 TATP17735 454 aaPredicted RBP13.89□□□□□ -0.19
SHANK2-201ENST00000338508 LRP2BPQ9P2M1 347 aa13.89□□□□□ -0.19
SHANK2-201ENST00000338508 COMMD10Q9Y6G5 202 aa13.89□□□□□ -0.19
SHANK2-201ENST00000338508 GPRASP1Q5JY77 1395 aa13.89□□□□□ -0.19
SHANK2-201ENST00000338508 XPCQ01831 940 aaPredicted RBP13.88□□□□□ -0.19
SHANK2-201ENST00000338508 ABCF2Q9UG63 623 aa13.88□□□□□ -0.19
SHANK2-201ENST00000338508 ERICH4A6NGS2 130 aa13.88□□□□□ -0.19
SHANK2-201ENST00000338508 CCP110O43303 1012 aa13.88□□□□□ -0.19
SHANK2-201ENST00000338508 RSPH4AQ5TD94 716 aa13.88□□□□□ -0.19
SHANK2-201ENST00000338508 GOPCQ9HD26 462 aa13.88□□□□□ -0.19
SHANK2-201ENST00000338508 BMP2KQ9NSY1 1161 aaPredicted RBP13.88□□□□□ -0.19
SHANK2-201ENST00000338508 PIP4K2AP48426 406 aaPredicted RBP13.88□□□□□ -0.19
SHANK2-201ENST00000338508 PRKRIP1Q9H875 184 aaPredicted RBP13.88□□□□□ -0.19
SHANK2-201ENST00000338508 TRIM21P19474 475 aaKnown RBP13.87□□□□□ -0.19
SHANK2-201ENST00000338508 GRM1Q13255 1194 aa13.87□□□□□ -0.19
SHANK2-201ENST00000338508 CTNNBL1Q8WYA6 563 aaPredicted RBP13.87□□□□□ -0.19
SHANK2-201ENST00000338508 GNAI2P04899 355 aa13.87□□□□□ -0.19
SHANK2-201ENST00000338508 EIF5P55010 431 aaKnown RBP13.87□□□□□ -0.19
SHANK2-201ENST00000338508 MACROD2A1Z1Q3 448 aa13.87□□□□□ -0.19
SHANK2-201ENST00000338508 HIP1O00291 1037 aa13.87□□□□□ -0.19
SHANK2-201ENST00000338508 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
SHANK2-201ENST00000338508 UBAC1Q9BSL1 405 aa13.87□□□□□ -0.19
SHANK2-201ENST00000338508 CYP46A1Q9Y6A2 500 aa13.87□□□□□ -0.19
SHANK2-201ENST00000338508 MTHFSP49914 203 aa13.87□□□□□ -0.19
SHANK2-201ENST00000338508 CCDC102AQ96A19 550 aa13.87□□□□□ -0.19
SHANK2-201ENST00000338508 SERPINA10Q9UK55 444 aa13.87□□□□□ -0.19
SHANK2-201ENST00000338508 JMYQ8N9B5 988 aa13.86□□□□□ -0.19
SHANK2-201ENST00000338508 DYDC1Q8WWB3 177 aa13.86□□□□□ -0.19
SHANK2-201ENST00000338508 ECM2O94769 699 aaPredicted RBP13.86□□□□□ -0.19
SHANK2-201ENST00000338508 TMX1Q9H3N1 280 aa13.86□□□□□ -0.19
SHANK2-201ENST00000338508 NOB1Q9ULX3 412 aaKnown RBP13.86□□□□□ -0.19
SHANK2-201ENST00000338508 UBE4AQ14139 1066 aa13.86□□□□□ -0.19
SHANK2-201ENST00000338508 LRRCC1Q9C099 1032 aa13.86□□□□□ -0.19
SHANK2-201ENST00000338508 NOL7Q9UMY1 257 aaKnown RBP13.86□□□□□ -0.19
SHANK2-201ENST00000338508 PDCP20941 246 aa13.86□□□□□ -0.19
SHANK2-201ENST00000338508 HDGFL1Q5TGJ6 251 aa13.86□□□□□ -0.19
SHANK2-201ENST00000338508 BCCIPQ9P287 314 aaKnown RBP eCLIP13.86□□□□□ -0.197e-6■■■■□ 19.3
SHANK2-201ENST00000338508 SMG6Q86US8 1419 aaKnown RBP13.86□□□□□ -0.19
SHANK2-201ENST00000338508 GNAI3P08754 354 aa13.86□□□□□ -0.19
SHANK2-201ENST00000338508 IDH1O75874 414 aaKnown RBP13.85□□□□□ -0.19
SHANK2-201ENST00000338508 CEP57L1Q8IYX8 460 aa13.85□□□□□ -0.19
SHANK2-201ENST00000338508 DACH1Q9UI36 760 aa13.85□□□□□ -0.19
SHANK2-201ENST00000338508 ZBED9Q6R2W3 1325 aa13.85□□□□□ -0.19
SHANK2-201ENST00000338508 MAP2K1Q02750 393 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-201ENST00000338508 CWC27Q6UX04 472 aaKnown RBP13.85□□□□□ -0.19
SHANK2-201ENST00000338508 DRC1Q96MC2 740 aa13.85□□□□□ -0.19
SHANK2-201ENST00000338508 CCDC66A2RUB6 948 aa13.85□□□□□ -0.19
SHANK2-201ENST00000338508 AACSQ86V21 672 aa13.85□□□□□ -0.19
SHANK2-201ENST00000338508 PRKAR2BP31323 418 aa13.85□□□□□ -0.19
SHANK2-201ENST00000338508 SLC4A8Q2Y0W8 1093 aa13.85□□□□□ -0.19
SHANK2-201ENST00000338508 JAKMIP3Q5VZ66 844 aa13.85□□□□□ -0.19
SHANK2-201ENST00000338508 LARP1BQ659C4 914 aaKnown RBP13.84□□□□□ -0.19
SHANK2-201ENST00000338508 DDX11Q96FC9 970 aa13.84□□□□□ -0.19
SHANK2-201ENST00000338508 DHX57Q6P158 1386 aaKnown RBP13.84□□□□□ -0.19
SHANK2-201ENST00000338508 CRACR2BQ8N4Y2 399 aaPredicted RBP13.84□□□□□ -0.19
SHANK2-201ENST00000338508 MINDY4BA8MYZ0 360 aa13.84□□□□□ -0.19
SHANK2-201ENST00000338508 TSR2Q969E8 191 aaKnown RBP13.84□□□□□ -0.19
SHANK2-201ENST00000338508 CFAP45Q9UL16 551 aa13.84□□□□□ -0.19
SHANK2-201ENST00000338508 RABEP1Q15276 862 aa13.84□□□□□ -0.19
SHANK2-201ENST00000338508 CCDC91Q7Z6B0 441 aa13.84□□□□□ -0.19
SHANK2-201ENST00000338508 BCAR3O75815 825 aa13.83□□□□□ -0.19
SHANK2-201ENST00000338508 GAS2L2Q8NHY3 880 aa13.83□□□□□ -0.19
SHANK2-201ENST00000338508 MIA2Q96PC5 1412 aa13.83□□□□□ -0.2
SHANK2-201ENST00000338508 TAF4BQ92750 862 aa13.83□□□□□ -0.2
SHANK2-201ENST00000338508 KIF7Q2M1P5 1343 aa13.83□□□□□ -0.2
SHANK2-201ENST00000338508 CCDC192P0DO97 292 aa13.83□□□□□ -0.2
SHANK2-201ENST00000338508 TWISTNBQ3B726 338 aaPredicted RBP13.83□□□□□ -0.2
SHANK2-201ENST00000338508 POTEJP0CG39 1038 aa13.83□□□□□ -0.2
SHANK2-201ENST00000338508 MRE11P49959 708 aa13.83□□□□□ -0.2
SHANK2-201ENST00000338508 KLHL10Q6JEL2 608 aa13.83□□□□□ -0.2
SHANK2-201ENST00000338508 POLR3DP05423 398 aaPredicted RBP13.83□□□□□ -0.2
SHANK2-201ENST00000338508 FILIP1Q7Z7B0 1213 aa13.83□□□□□ -0.2
SHANK2-201ENST00000338508 CEP63Q96MT8 703 aa13.83□□□□□ -0.2
SHANK2-201ENST00000338508 TMOD2Q9NZR1 351 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms