RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 LTN1O94822 1766 aa17.22■□□□□ 0.35
PRIM1-201ENST00000338193 GCP02774 474 aa17.22■□□□□ 0.35
PRIM1-201ENST00000338193 ZC3H6P61129 1189 aaKnown RBP17.22■□□□□ 0.35
PRIM1-201ENST00000338193 PEAK1Q9H792 1746 aa17.22■□□□□ 0.35
PRIM1-201ENST00000338193 SPATA31A6Q5VVP1 1343 aa17.21■□□□□ 0.35
PRIM1-201ENST00000338193 COG3Q96JB2 828 aa17.21■□□□□ 0.35
PRIM1-201ENST00000338193 KIAA0232Q92628 1395 aa17.21■□□□□ 0.34
PRIM1-201ENST00000338193 COL18A1P39060 1754 aa17.2■□□□□ 0.34
PRIM1-201ENST00000338193 PLCH1Q4KWH8 1693 aa17.2■□□□□ 0.34
PRIM1-201ENST00000338193 TNNT2P45379 298 aaPredicted RBP17.2■□□□□ 0.34
PRIM1-201ENST00000338193 RGPD5Q99666 1765 aa17.2■□□□□ 0.34
PRIM1-201ENST00000338193 CHRNA2Q15822 529 aa17.19■□□□□ 0.34
PRIM1-201ENST00000338193 RRS1Q15050 365 aaKnown RBP17.18■□□□□ 0.34
PRIM1-201ENST00000338193 MAP2P11137 1827 aaKnown RBP17.18■□□□□ 0.34
PRIM1-201ENST00000338193 LMO7Q8WWI1 1683 aa17.18■□□□□ 0.34
PRIM1-201ENST00000338193 NSD2O96028 1365 aa17.18■□□□□ 0.34
PRIM1-201ENST00000338193 ZBTB7CA1YPR0 619 aa17.17■□□□□ 0.34
PRIM1-201ENST00000338193 FAM83GA6ND36 823 aa17.17■□□□□ 0.34
PRIM1-201ENST00000338193 NPC1L1Q9UHC9 1359 aa17.17■□□□□ 0.34
PRIM1-201ENST00000338193 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
PRIM1-201ENST00000338193 MAP3K19Q56UN5 1328 aa17.16■□□□□ 0.34
PRIM1-201ENST00000338193 NRAPQ86VF7 1730 aa17.15■□□□□ 0.34
PRIM1-201ENST00000338193 MORC1Q86VD1 984 aa17.15■□□□□ 0.34
PRIM1-201ENST00000338193 ARHGEF25Q86VW2 580 aa17.15■□□□□ 0.34
PRIM1-201ENST00000338193 EMILIN1Q9Y6C2 1016 aa17.15■□□□□ 0.34
PRIM1-201ENST00000338193 CPDO75976 1380 aa17.15■□□□□ 0.34
PRIM1-201ENST00000338193 CAMTA1Q9Y6Y1 1673 aa17.15■□□□□ 0.34
PRIM1-201ENST00000338193 COL14A1Q05707 1796 aaKnown RBP17.15■□□□□ 0.34
PRIM1-201ENST00000338193 C8orf37Q96NL8 207 aa17.15■□□□□ 0.34
PRIM1-201ENST00000338193 AXIN2Q9Y2T1 843 aa17.15■□□□□ 0.34
PRIM1-201ENST00000338193 PARD3Q8TEW0 1356 aa17.13■□□□□ 0.33
PRIM1-201ENST00000338193 KCNH5Q8NCM2 988 aa17.13■□□□□ 0.33
PRIM1-201ENST00000338193 PRDM11Q9NQV5 511 aa17.13■□□□□ 0.33
PRIM1-201ENST00000338193 POLKQ9UBT6 870 aa17.13■□□□□ 0.33
PRIM1-201ENST00000338193 SLIT2O94813 1529 aa17.12■□□□□ 0.33
PRIM1-201ENST00000338193 AATKQ6ZMQ8 1374 aa17.11■□□□□ 0.33
PRIM1-201ENST00000338193 SPDYE2BA6NHP3 402 aa17.11■□□□□ 0.33
PRIM1-201ENST00000338193 SPDYE6P0CI01 402 aa17.11■□□□□ 0.33
PRIM1-201ENST00000338193 SPDYE2Q495Y8 402 aa17.11■□□□□ 0.33
PRIM1-201ENST00000338193 MEX3CQ5U5Q3 659 aaKnown RBP17.11■□□□□ 0.33
PRIM1-201ENST00000338193 RGPD2P0DJD1 1756 aa17.1■□□□□ 0.33
PRIM1-201ENST00000338193 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
PRIM1-201ENST00000338193 SMG6Q86US8 1419 aaKnown RBP17.1■□□□□ 0.33
PRIM1-201ENST00000338193 BCL9LQ86UU0 1499 aa17.1■□□□□ 0.33
PRIM1-201ENST00000338193 AFF2P51816 1311 aa17.1■□□□□ 0.33
PRIM1-201ENST00000338193 NGLY1Q96IV0 654 aa17.09■□□□□ 0.33
PRIM1-201ENST00000338193 RGS17Q9UGC6 210 aaPredicted RBP17.09■□□□□ 0.33
PRIM1-201ENST00000338193 PPP2R1AP30153 589 aa17.08■□□□□ 0.32
PRIM1-201ENST00000338193 HOXC9P31274 260 aa17.08■□□□□ 0.32
PRIM1-201ENST00000338193 HSP90AB2PQ58FF8 381 aa17.08■□□□□ 0.32
PRIM1-201ENST00000338193 BTG4Q9NY30 223 aa17.08■□□□□ 0.32
PRIM1-201ENST00000338193 COL5A2P05997 1499 aaPredicted RBP17.07■□□□□ 0.32
PRIM1-201ENST00000338193 PPM1GO15355 546 aaPredicted RBP17.07■□□□□ 0.32
PRIM1-201ENST00000338193 FNBP4Q8N3X1 1017 aaPredicted RBP17.07■□□□□ 0.32
PRIM1-201ENST00000338193 PRKRIP1Q9H875 184 aaPredicted RBP17.07■□□□□ 0.32
PRIM1-201ENST00000338193 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.07■□□□□ 0.32
PRIM1-201ENST00000338193 MTHFSP49914 203 aa17.06■□□□□ 0.32
PRIM1-201ENST00000338193 COL3A1P02461 1466 aaPredicted RBP17.06■□□□□ 0.32
PRIM1-201ENST00000338193 ABCC6O95255 1503 aa17.06■□□□□ 0.32
PRIM1-201ENST00000338193 AMPHP49418 695 aa17.05■□□□□ 0.32
PRIM1-201ENST00000338193 IP6K1Q92551 441 aa17.05■□□□□ 0.32
PRIM1-201ENST00000338193 LTV1Q96GA3 475 aaPredicted RBP17.04■□□□□ 0.32
PRIM1-201ENST00000338193 STRN4Q9NRL3 753 aa17.04■□□□□ 0.32
PRIM1-201ENST00000338193 CDK12Q9NYV4 1490 aaPredicted RBP17.04■□□□□ 0.32
PRIM1-201ENST00000338193 CCDC184Q52MB2 194 aa17.03■□□□□ 0.32
PRIM1-201ENST00000338193 LARP1Q6PKG0 1096 aaKnown RBP17.03■□□□□ 0.32
PRIM1-201ENST00000338193 RTL1A6NKG5 1358 aa17.03■□□□□ 0.32
PRIM1-201ENST00000338193 FLT4P35916 1363 aa17.03■□□□□ 0.32
PRIM1-201ENST00000338193 PRKAR2AP13861 404 aaKnown RBP17.02■□□□□ 0.32
PRIM1-201ENST00000338193 USP21Q9UK80 565 aa17.02■□□□□ 0.32
PRIM1-201ENST00000338193 GLI3P10071 1580 aa17.02■□□□□ 0.31
PRIM1-201ENST00000338193 ATRNO75882 1429 aa17.02■□□□□ 0.31
PRIM1-201ENST00000338193 BLMP54132 1417 aaPredicted RBP17.02■□□□□ 0.31
PRIM1-201ENST00000338193 INSRP06213 1382 aa17.02■□□□□ 0.31
PRIM1-201ENST00000338193 ERBB3P21860 1342 aa17.02■□□□□ 0.31
PRIM1-201ENST00000338193 UNC5CLQ8IV45 518 aa17.02■□□□□ 0.31
PRIM1-201ENST00000338193 ANKRD24Q8TF21 1146 aa17.02■□□□□ 0.31
PRIM1-201ENST00000338193 FAM208AQ9UK61 1670 aaKnown RBP17.01■□□□□ 0.31
PRIM1-201ENST00000338193 ATXN8OSP0DMR3 200 aa17.01■□□□□ 0.31
PRIM1-201ENST00000338193 RALBP1Q15311 655 aa17.01■□□□□ 0.31
PRIM1-201ENST00000338193 DIEXFQ68CQ4 756 aaKnown RBP17.01■□□□□ 0.31
PRIM1-201ENST00000338193 POTEAQ6S8J7 498 aa17.01■□□□□ 0.31
PRIM1-201ENST00000338193 RGPD1P0DJD0 1748 aa17■□□□□ 0.31
PRIM1-201ENST00000338193 ZBTB22O15209 634 aa17■□□□□ 0.31
PRIM1-201ENST00000338193 EIF4A2Q14240 407 aaKnown RBP17■□□□□ 0.31
PRIM1-201ENST00000338193 KIF24Q5T7B8 1368 aa16.99■□□□□ 0.31
PRIM1-201ENST00000338193 MYBBP1AQ9BQG0 1328 aaKnown RBP16.99■□□□□ 0.31
PRIM1-201ENST00000338193 WDR17Q8IZU2 1322 aa16.98■□□□□ 0.31
PRIM1-201ENST00000338193 USHBP1Q8N6Y0 703 aa16.98■□□□□ 0.31
PRIM1-201ENST00000338193 WNK3Q9BYP7 1800 aa16.97■□□□□ 0.31
PRIM1-201ENST00000338193 EVA1CP58658 441 aa16.97■□□□□ 0.31
PRIM1-201ENST00000338193 NBPF6Q5VWK0 638 aa16.97■□□□□ 0.31
PRIM1-201ENST00000338193 NBPF4Q96M43 638 aa16.97■□□□□ 0.31
PRIM1-201ENST00000338193 ANP32CO43423 234 aa16.96■□□□□ 0.31
PRIM1-201ENST00000338193 IL13P35225 146 aa16.96■□□□□ 0.31
PRIM1-201ENST00000338193 VPS72Q15906 364 aa16.96■□□□□ 0.31
PRIM1-201ENST00000338193 QTRT2Q9H974 415 aaKnown RBP16.96■□□□□ 0.31
PRIM1-201ENST00000338193 USP35Q9P2H5 1018 aa16.96■□□□□ 0.31
PRIM1-201ENST00000338193 CRB1P82279 1406 aa16.96■□□□□ 0.31
PRIM1-201ENST00000338193 SPATA31A1Q5TZJ5 1347 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms