RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 AMER1Q5JTC6 1135 aaPredicted RBP18.86■□□□□ 0.61
HDAC5-202ENST00000336057 HOMER1Q86YM7 354 aa18.86■□□□□ 0.61
HDAC5-202ENST00000336057 FBXW7Q969H0 707 aa18.86■□□□□ 0.61
HDAC5-202ENST00000336057 TBC1D2Q9BYX2 928 aa18.86■□□□□ 0.61
HDAC5-202ENST00000336057 MARCH6O60337 910 aa18.85■□□□□ 0.61
HDAC5-202ENST00000336057 THEMISQ8N1K5 641 aaPredicted RBP18.85■□□□□ 0.61
HDAC5-202ENST00000336057 DNAJC2Q99543 621 aaKnown RBP18.85■□□□□ 0.61
HDAC5-202ENST00000336057 SDF4Q9BRK5 362 aa18.85■□□□□ 0.61
HDAC5-202ENST00000336057 ZNF530Q6P9A1 599 aaPredicted RBP18.85■□□□□ 0.61
HDAC5-202ENST00000336057 ITSN2Q9NZM3 1697 aa18.85■□□□□ 0.61
HDAC5-202ENST00000336057 SRGAP3O43295 1099 aa18.85■□□□□ 0.61
HDAC5-202ENST00000336057 CD109Q6YHK3 1445 aa18.85■□□□□ 0.61
HDAC5-202ENST00000336057 NOC3LQ8WTT2 800 aaKnown RBP18.85■□□□□ 0.61
HDAC5-202ENST00000336057 SLC26A8Q96RN1 970 aa18.85■□□□□ 0.61
HDAC5-202ENST00000336057 NAT10Q9H0A0 1025 aaKnown RBP18.84■□□□□ 0.61
HDAC5-202ENST00000336057 TPM2P07951 284 aa18.84■□□□□ 0.61
HDAC5-202ENST00000336057 SAFBQ15424 915 aaKnown RBP eCLIP18.84■□□□□ 0.61
HDAC5-202ENST00000336057 ERICH2A1L162 156 aa18.84■□□□□ 0.61
HDAC5-202ENST00000336057 DCTN1Q14203 1278 aa18.84■□□□□ 0.61
HDAC5-202ENST00000336057 NUP160Q12769 1436 aa18.84■□□□□ 0.61
HDAC5-202ENST00000336057 SYTL4Q96C24 671 aaPredicted RBP18.84■□□□□ 0.61
HDAC5-202ENST00000336057 ATP10BO94823 1461 aa18.84■□□□□ 0.61
HDAC5-202ENST00000336057 MCM10Q7L590 875 aa18.83■□□□□ 0.61
HDAC5-202ENST00000336057 MAP4K4O95819 1239 aaPredicted RBP18.83■□□□□ 0.61
HDAC5-202ENST00000336057 AEBP1Q8IUX7 1158 aa18.83■□□□□ 0.61
HDAC5-202ENST00000336057 TRIM5Q9C035 493 aa18.83■□□□□ 0.61
HDAC5-202ENST00000336057 IL1RAPL2Q9NP60 686 aa18.83■□□□□ 0.61
HDAC5-202ENST00000336057 EXOC6BQ9Y2D4 811 aa18.83■□□□□ 0.61
HDAC5-202ENST00000336057 IDI1Q13907 227 aa18.83■□□□□ 0.6
HDAC5-202ENST00000336057 NME9Q86XW9 330 aa18.82■□□□□ 0.6
HDAC5-202ENST00000336057 EMILIN1Q9Y6C2 1016 aa18.82■□□□□ 0.6
HDAC5-202ENST00000336057 DHX29Q7Z478 1369 aaKnown RBP18.82■□□□□ 0.6
HDAC5-202ENST00000336057 ASXL1Q8IXJ9 1541 aa18.81■□□□□ 0.6
HDAC5-202ENST00000336057 G3V3G9 751 aa18.81■□□□□ 0.6
HDAC5-202ENST00000336057 DCAF8Q5TAQ9 597 aa18.81■□□□□ 0.6
HDAC5-202ENST00000336057 ANKRD20A12PQ8NF67 263 aa18.81■□□□□ 0.6
HDAC5-202ENST00000336057 ESPNB1AK53 854 aa18.81■□□□□ 0.6
HDAC5-202ENST00000336057 ANKRD1Q15327 319 aa18.81■□□□□ 0.6
HDAC5-202ENST00000336057 MAP7D2Q96T17 732 aa18.81■□□□□ 0.6
HDAC5-202ENST00000336057 TNNT3P45378 269 aaPredicted RBP18.81■□□□□ 0.6
HDAC5-202ENST00000336057 VPS37DQ86XT2 251 aa18.81■□□□□ 0.6
HDAC5-202ENST00000336057 MIS18AQ9NYP9 233 aa18.81■□□□□ 0.6
HDAC5-202ENST00000336057 KINO60870 393 aaKnown RBP18.81■□□□□ 0.6
HDAC5-202ENST00000336057 MTERF4Q7Z6M4 381 aaKnown RBP18.81■□□□□ 0.6
HDAC5-202ENST00000336057 GNAT3A8MTJ3 354 aa18.8■□□□□ 0.6
HDAC5-202ENST00000336057 TESK2Q96S53 571 aa18.79■□□□□ 0.6
HDAC5-202ENST00000336057 FANCAO15360 1455 aa18.79■□□□□ 0.6
HDAC5-202ENST00000336057 A0A0U1RQG5 324 aaPredicted RBP18.79■□□□□ 0.6
HDAC5-202ENST00000336057 AMOTL1Q8IY63 956 aa18.79■□□□□ 0.6
HDAC5-202ENST00000336057 SIL1Q9H173 461 aa18.79■□□□□ 0.6
HDAC5-202ENST00000336057 TBC1D32Q96NH3 1257 aa18.79■□□□□ 0.6
HDAC5-202ENST00000336057 IL16Q14005 1332 aa18.79■□□□□ 0.6
HDAC5-202ENST00000336057 TATP17735 454 aaPredicted RBP18.79■□□□□ 0.6
HDAC5-202ENST00000336057 SMARCA5O60264 1052 aaPredicted RBP18.78■□□□□ 0.6
HDAC5-202ENST00000336057 CCDC192P0DO97 292 aa18.78■□□□□ 0.6
HDAC5-202ENST00000336057 MX1P20591 662 aa18.78■□□□□ 0.6
HDAC5-202ENST00000336057 GPS2Q13227 327 aa18.78■□□□□ 0.6
HDAC5-202ENST00000336057 KRT85P78386 507 aa18.78■□□□□ 0.6
HDAC5-202ENST00000336057 CWC27Q6UX04 472 aaKnown RBP18.78■□□□□ 0.6
HDAC5-202ENST00000336057 AACSQ86V21 672 aa18.78■□□□□ 0.6
HDAC5-202ENST00000336057 BMP2KLQ5H9B9 411 aa18.77■□□□□ 0.6
HDAC5-202ENST00000336057 LARP1BQ659C4 914 aaKnown RBP18.77■□□□□ 0.6
HDAC5-202ENST00000336057 NOL10Q9BSC4 688 aaKnown RBP18.77■□□□□ 0.6
HDAC5-202ENST00000336057 DUOX2Q9NRD8 1548 aa18.77■□□□□ 0.6
HDAC5-202ENST00000336057 IPO7O95373 1038 aaKnown RBP18.77■□□□□ 0.6
HDAC5-202ENST00000336057 HMGN5P82970 282 aaKnown RBP18.77■□□□□ 0.6
HDAC5-202ENST00000336057 ZSCAN31Q96LW9 406 aaPredicted RBP18.77■□□□□ 0.6
HDAC5-202ENST00000336057 ANO8Q9HCE9 1232 aaPredicted RBP18.77■□□□□ 0.6
HDAC5-202ENST00000336057 ZNF771Q7L3S4 317 aaPredicted RBP18.77■□□□□ 0.59
HDAC5-202ENST00000336057 ZNF396Q96N95 335 aaPredicted RBP18.77■□□□□ 0.59
HDAC5-202ENST00000336057 WDR62O43379 1518 aa18.77■□□□□ 0.59
HDAC5-202ENST00000336057 CCDC47Q96A33 483 aaKnown RBP18.76■□□□□ 0.59
HDAC5-202ENST00000336057 DHX16O60231 1041 aaKnown RBP18.76■□□□□ 0.59
HDAC5-202ENST00000336057 PDRG1Q9NUG6 133 aa18.76■□□□□ 0.59
HDAC5-202ENST00000336057 BTBD11A6QL63 1104 aa18.76■□□□□ 0.59
HDAC5-202ENST00000336057 WASLO00401 505 aaPredicted RBP18.76■□□□□ 0.59
HDAC5-202ENST00000336057 BLOC1S2Q6QNY1 142 aa18.76■□□□□ 0.59
HDAC5-202ENST00000336057 OLFM4Q6UX06 510 aa18.76■□□□□ 0.59
HDAC5-202ENST00000336057 ANKRD36BQ8N2N9 1353 aa18.76■□□□□ 0.59
HDAC5-202ENST00000336057 JAKMIP1Q96N16 626 aaKnown RBP18.76■□□□□ 0.59
HDAC5-202ENST00000336057 NUTM1Q86Y26 1132 aa18.75■□□□□ 0.59
HDAC5-202ENST00000336057 STK3Q13188 491 aa18.75■□□□□ 0.59
HDAC5-202ENST00000336057 ARHGEF12Q9NZN5 1544 aa18.75■□□□□ 0.59
HDAC5-202ENST00000336057 KDM5BQ9UGL1 1544 aa18.75■□□□□ 0.59
HDAC5-202ENST00000336057 PROSER2Q86WR7 435 aaPredicted RBP18.75■□□□□ 0.59
HDAC5-202ENST00000336057 TBC1D2BQ9UPU7 963 aa18.75■□□□□ 0.59
HDAC5-202ENST00000336057 PCDHB15Q9Y5E8 787 aa18.75■□□□□ 0.59
HDAC5-202ENST00000336057 HDAC1Q13547 482 aaPredicted RBP18.74■□□□□ 0.59
HDAC5-202ENST00000336057 KIF1BPQ96EK5 621 aa18.74■□□□□ 0.59
HDAC5-202ENST00000336057 CEBPZQ03701 1054 aaKnown RBP18.74■□□□□ 0.59
HDAC5-202ENST00000336057 VPS53Q5VIR6 699 aa18.74■□□□□ 0.59
HDAC5-202ENST00000336057 TNPO1Q92973 898 aaKnown RBP18.74■□□□□ 0.59
HDAC5-202ENST00000336057 PLCH2O75038 1416 aa18.74■□□□□ 0.59
HDAC5-202ENST00000336057 SYCP2Q9BX26 1530 aa18.74■□□□□ 0.59
HDAC5-202ENST00000336057 MNS1Q8NEH6 495 aa18.74■□□□□ 0.59
HDAC5-202ENST00000336057 FBXO31Q5XUX0 539 aaPredicted RBP18.73■□□□□ 0.59
HDAC5-202ENST00000336057 TNMDQ9H2S6 317 aa18.73■□□□□ 0.59
HDAC5-202ENST00000336057 RAB11FIP3O75154 756 aa18.73■□□□□ 0.59
HDAC5-202ENST00000336057 CCDC70Q6NSX1 233 aa18.73■□□□□ 0.59
HDAC5-202ENST00000336057 SPC24Q8NBT2 197 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms