RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 ALDH1L2Q3SY69 923 aa27.38■■□□□ 1.97
LIMS2-201ENST00000324938 USP6P35125 1406 aa27.37■■□□□ 1.97
LIMS2-201ENST00000324938 RRS1Q15050 365 aaKnown RBP27.37■■□□□ 1.97
LIMS2-201ENST00000324938 RWDD1Q9H446 243 aaPredicted RBP27.37■■□□□ 1.97
LIMS2-201ENST00000324938 TTC21BQ7Z4L5 1316 aa27.37■■□□□ 1.97
LIMS2-201ENST00000324938 ACEP12821 1306 aa27.36■■□□□ 1.97
LIMS2-201ENST00000324938 ZNF428Q96B54 188 aa27.36■■□□□ 1.97
LIMS2-201ENST00000324938 RIMS1Q86UR5 1692 aaKnown RBP27.36■■□□□ 1.97
LIMS2-201ENST00000324938 SLC26A8Q96RN1 970 aa27.34■■□□□ 1.97
LIMS2-201ENST00000324938 NOB1Q9ULX3 412 aaKnown RBP27.34■■□□□ 1.97
LIMS2-201ENST00000324938 DDX19BQ9UMR2 479 aa27.34■■□□□ 1.97
LIMS2-201ENST00000324938 XRN1Q8IZH2 1706 aaKnown RBP27.34■■□□□ 1.97
LIMS2-201ENST00000324938 PEAK1Q9H792 1746 aa27.33■■□□□ 1.97
LIMS2-201ENST00000324938 BRPF1P55201 1214 aaPredicted RBP27.32■■□□□ 1.96
LIMS2-201ENST00000324938 TBX22Q9Y458 520 aa27.32■■□□□ 1.96
LIMS2-201ENST00000324938 RGPD1P0DJD0 1748 aa27.32■■□□□ 1.96
LIMS2-201ENST00000324938 IPO8O15397 1037 aaKnown RBP27.32■■□□□ 1.96
LIMS2-201ENST00000324938 IFT57Q9NWB7 429 aa27.32■■□□□ 1.96
LIMS2-201ENST00000324938 RGPD8O14715 1765 aaPredicted RBP27.32■■□□□ 1.96
LIMS2-201ENST00000324938 LMOD3Q0VAK6 560 aa27.31■■□□□ 1.96
LIMS2-201ENST00000324938 SSH2Q76I76 1423 aa27.31■■□□□ 1.96
LIMS2-201ENST00000324938 GNAI1P63096 354 aa27.31■■□□□ 1.96
LIMS2-201ENST00000324938 FMN2Q9NZ56 1722 aa27.31■■□□□ 1.96
LIMS2-201ENST00000324938 PDZRN3Q9UPQ7 1066 aa27.3■■□□□ 1.96
LIMS2-201ENST00000324938 ZNF853P0CG23 659 aa27.29■■□□□ 1.96
LIMS2-201ENST00000324938 NBR1Q14596 966 aa27.29■■□□□ 1.96
LIMS2-201ENST00000324938 ITPRIPQ8IWB1 547 aa27.29■■□□□ 1.96
LIMS2-201ENST00000324938 AMOTL2Q9Y2J4 779 aa27.29■■□□□ 1.96
LIMS2-201ENST00000324938 USP31Q70CQ4 1352 aa27.28■■□□□ 1.96
LIMS2-201ENST00000324938 THUMPD2Q9BTF0 503 aaKnown RBP27.28■■□□□ 1.96
LIMS2-201ENST00000324938 LAS1LQ9Y4W2 734 aaKnown RBP27.28■■□□□ 1.96
LIMS2-201ENST00000324938 TMEM57Q8N5G2 664 aa27.27■■□□□ 1.96
LIMS2-201ENST00000324938 HDAC1Q13547 482 aaPredicted RBP27.26■■□□□ 1.96
LIMS2-201ENST00000324938 THEMISQ8N1K5 641 aaPredicted RBP27.26■■□□□ 1.96
LIMS2-201ENST00000324938 NUTM2FA1L443 756 aa27.26■■□□□ 1.95
LIMS2-201ENST00000324938 VAMP4O75379 141 aa27.25■■□□□ 1.95
LIMS2-201ENST00000324938 EIF4A2Q14240 407 aaKnown RBP27.25■■□□□ 1.95
LIMS2-201ENST00000324938 MBIPQ9NS73 344 aa27.24■■□□□ 1.95
LIMS2-201ENST00000324938 TTC21AQ8NDW8 1320 aa27.23■■□□□ 1.95
LIMS2-201ENST00000324938 CFAP44Q96MT7 982 aa27.23■■□□□ 1.95
LIMS2-201ENST00000324938 ZBTB40Q9NUA8 1239 aa27.23■■□□□ 1.95
LIMS2-201ENST00000324938 CEP170BQ9Y4F5 1589 aaPredicted RBP27.21■■□□□ 1.95
LIMS2-201ENST00000324938 PIK3R4Q99570 1358 aa27.21■■□□□ 1.95
LIMS2-201ENST00000324938 USP19O94966 1318 aa27.21■■□□□ 1.95
LIMS2-201ENST00000324938 MRPL50Q8N5N7 158 aaKnown RBP27.2■■□□□ 1.95
LIMS2-201ENST00000324938 PIK3C2AO00443 1686 aa27.2■■□□□ 1.95
LIMS2-201ENST00000324938 ARHGAP45Q92619 1136 aa27.2■■□□□ 1.94
LIMS2-201ENST00000324938 PLPPR3Q6T4P5 718 aa27.19■■□□□ 1.94
LIMS2-201ENST00000324938 TSPYL6Q8N831 410 aa27.19■■□□□ 1.94
LIMS2-201ENST00000324938 AEBP1Q8IUX7 1158 aa27.18■■□□□ 1.94
LIMS2-201ENST00000324938 SULT6B1Q6IMI4 303 aa27.17■■□□□ 1.94
LIMS2-201ENST00000324938 ANKARQ7Z5J8 1434 aa27.17■■□□□ 1.94
LIMS2-201ENST00000324938 USP54Q70EL1 1684 aa27.17■■□□□ 1.94
LIMS2-201ENST00000324938 FAM83GA6ND36 823 aa27.16■■□□□ 1.94
LIMS2-201ENST00000324938 RTL5Q5HYW3 569 aaPredicted RBP27.16■■□□□ 1.94
LIMS2-201ENST00000324938 SMC5Q8IY18 1101 aa27.16■■□□□ 1.94
LIMS2-201ENST00000324938 TWISTNBQ3B726 338 aaPredicted RBP27.16■■□□□ 1.94
LIMS2-201ENST00000324938 SEC24BO95487 1268 aa27.14■■□□□ 1.94
LIMS2-201ENST00000324938 HSP90AB2PQ58FF8 381 aa27.14■■□□□ 1.94
LIMS2-201ENST00000324938 DAXXQ9UER7 740 aaPredicted RBP27.14■■□□□ 1.94
LIMS2-201ENST00000324938 MARF1Q9Y4F3 1742 aaKnown RBP27.14■■□□□ 1.94
LIMS2-201ENST00000324938 ARHGEF10O15013 1369 aa27.14■■□□□ 1.94
LIMS2-201ENST00000324938 SBNO1A3KN83 1393 aa27.12■■□□□ 1.93
LIMS2-201ENST00000324938 DCTN1Q14203 1278 aa27.12■■□□□ 1.93
LIMS2-201ENST00000324938 C8orf58Q8NAV2 365 aa27.12■■□□□ 1.93
LIMS2-201ENST00000324938 CHMP4BQ9H444 224 aaKnown RBP27.12■■□□□ 1.93
LIMS2-201ENST00000324938 ABCC4O15439 1325 aa27.12■■□□□ 1.93
LIMS2-201ENST00000324938 NGDNQ8NEJ9 315 aaKnown RBP27.11■■□□□ 1.93
LIMS2-201ENST00000324938 MAP3K19Q56UN5 1328 aa27.11■■□□□ 1.93
LIMS2-201ENST00000324938 FLT4P35916 1363 aa27.11■■□□□ 1.93
LIMS2-201ENST00000324938 ZNF142P52746 1687 aaPredicted RBP27.11■■□□□ 1.93
LIMS2-201ENST00000324938 CHD2O14647 1828 aaKnown RBP27.1■■□□□ 1.93
LIMS2-201ENST00000324938 ELL2O00472 640 aaPredicted RBP27.1■■□□□ 1.93
LIMS2-201ENST00000324938 SLC4A3P48751 1232 aa27.1■■□□□ 1.93
LIMS2-201ENST00000324938 USP35Q9P2H5 1018 aa27.09■■□□□ 1.93
LIMS2-201ENST00000324938 ZBTB7BO15156 539 aaPredicted RBP27.08■■□□□ 1.93
LIMS2-201ENST00000324938 KCNA6P17658 529 aa27.07■■□□□ 1.92
LIMS2-201ENST00000324938 KDRP35968 1356 aa27.06■■□□□ 1.92
LIMS2-201ENST00000324938 SOX12O15370 315 aa27.05■■□□□ 1.92
LIMS2-201ENST00000324938 API5Q9BZZ5 524 aaKnown RBP27.05■■□□□ 1.92
LIMS2-201ENST00000324938 CHL1O00533 1208 aa27.05■■□□□ 1.92
LIMS2-201ENST00000324938 KIAA0232Q92628 1395 aa27.04■■□□□ 1.92
LIMS2-201ENST00000324938 DEKP35659 375 aaKnown RBP27.04■■□□□ 1.92
LIMS2-201ENST00000324938 UPF2Q9HAU5 1272 aaKnown RBP27.04■■□□□ 1.92
LIMS2-201ENST00000324938 HAP1P54257 671 aaPredicted RBP27.03■■□□□ 1.92
LIMS2-201ENST00000324938 NUCB1Q02818 461 aa27.03■■□□□ 1.92
LIMS2-201ENST00000324938 KIF24Q5T7B8 1368 aa27.03■■□□□ 1.92
LIMS2-201ENST00000324938 CRB1P82279 1406 aa27.02■■□□□ 1.92
LIMS2-201ENST00000324938 TBC1D32Q96NH3 1257 aa27.02■■□□□ 1.92
LIMS2-201ENST00000324938 MCM10Q7L590 875 aa27.01■■□□□ 1.91
LIMS2-201ENST00000324938 IGSF1Q8N6C5 1336 aa27.01■■□□□ 1.91
LIMS2-201ENST00000324938 TRHP20396 242 aaPredicted RBP27.01■■□□□ 1.91
LIMS2-201ENST00000324938 LRRC37A3O60309 1634 aa26.99■■□□□ 1.91
LIMS2-201ENST00000324938 AMPHP49418 695 aa26.98■■□□□ 1.91
LIMS2-201ENST00000324938 GCC1Q96CN9 775 aa26.98■■□□□ 1.91
LIMS2-201ENST00000324938 CHD1LQ86WJ1 897 aa26.97■■□□□ 1.91
LIMS2-201ENST00000324938 RGS12O14924 1447 aa26.97■■□□□ 1.91
LIMS2-201ENST00000324938 NLRP6P59044 892 aa26.96■■□□□ 1.91
LIMS2-201ENST00000324938 NWD1Q149M9 1564 aa26.95■■□□□ 1.91
LIMS2-201ENST00000324938 BECN1Q14457 450 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms