RNA–Protein interactions for RNA: ENST00000324856.11

ARID1A-201, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARID1A, Length 8,577 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-201ENST00000324856 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.63■■□□□ 1.052e-7■■□□□ 14.1
ARID1A-201ENST00000324856 MIA2Q96PC5 1412 aa21.62■■□□□ 1.05
ARID1A-201ENST00000324856 CAVIN2O95810 425 aa21.62■■□□□ 1.05
ARID1A-201ENST00000324856 SLC3A2P08195 630 aaKnown RBP21.62■■□□□ 1.05
ARID1A-201ENST00000324856 CDKL5O76039 1030 aa21.62■■□□□ 1.05
ARID1A-201ENST00000324856 CYP46A1Q9Y6A2 500 aa21.62■■□□□ 1.05
ARID1A-201ENST00000324856 NGDNQ8NEJ9 315 aaKnown RBP21.61■■□□□ 1.05
ARID1A-201ENST00000324856 ERC1Q8IUD2 1116 aa21.61■■□□□ 1.05
ARID1A-201ENST00000324856 RIPK4P57078 832 aa21.61■■□□□ 1.05
ARID1A-201ENST00000324856 TRIM22Q8IYM9 498 aa21.61■■□□□ 1.05
ARID1A-201ENST00000324856 FOSBP53539 338 aa21.6■■□□□ 1.05
ARID1A-201ENST00000324856 GSDMDP57764 484 aa21.6■■□□□ 1.05
ARID1A-201ENST00000324856 PPP4R3BQ5MIZ7 849 aa21.6■■□□□ 1.05
ARID1A-201ENST00000324856 TAF4BQ92750 862 aa21.6■■□□□ 1.05
ARID1A-201ENST00000324856 KRT222Q8N1A0 295 aa21.59■■□□□ 1.05
ARID1A-201ENST00000324856 SRCIN1Q9C0H9 1055 aa21.59■■□□□ 1.05
ARID1A-201ENST00000324856 GTPBP4Q9BZE4 634 aaKnown RBP21.59■■□□□ 1.05
ARID1A-201ENST00000324856 SPATA32Q96LK8 384 aa21.59■■□□□ 1.05
ARID1A-201ENST00000324856 SCAPERQ9BY12 1400 aa21.59■■□□□ 1.05
ARID1A-201ENST00000324856 PRDM10Q9NQV6 1147 aa21.59■■□□□ 1.05
ARID1A-201ENST00000324856 TUBB4BP68371 445 aa21.59■■□□□ 1.05
ARID1A-201ENST00000324856 CCDC183Q5T5S1 534 aa21.58■■□□□ 1.05
ARID1A-201ENST00000324856 BMS1Q14692 1282 aaKnown RBP21.58■■□□□ 1.05
ARID1A-201ENST00000324856 TAOK3Q9H2K8 898 aa21.58■■□□□ 1.05
ARID1A-201ENST00000324856 WWC2Q6AWC2 1192 aa21.58■■□□□ 1.05
ARID1A-201ENST00000324856 CETN2P41208 172 aa21.58■■□□□ 1.05
ARID1A-201ENST00000324856 UBTFL1P0CB47 393 aaPredicted RBP21.58■■□□□ 1.04
ARID1A-201ENST00000324856 ELL2O00472 640 aaPredicted RBP21.58■■□□□ 1.04
ARID1A-201ENST00000324856 C6orf163Q5TEZ5 329 aa21.57■■□□□ 1.04
ARID1A-201ENST00000324856 RAD21O60216 631 aa21.57■■□□□ 1.04
ARID1A-201ENST00000324856 NAA15Q9BXJ9 866 aaKnown RBP21.57■■□□□ 1.04
ARID1A-201ENST00000324856 GNAI3P08754 354 aa21.57■■□□□ 1.04
ARID1A-201ENST00000324856 BBXQ8WY36 941 aaPredicted RBP21.57■■□□□ 1.04
ARID1A-201ENST00000324856 PLEKHH2Q8IVE3 1493 aa21.56■■□□□ 1.04
ARID1A-201ENST00000324856 HSPA4P34932 840 aa21.56■■□□□ 1.04
ARID1A-201ENST00000324856 ANKS4BQ8N8V4 417 aa21.56■■□□□ 1.04
ARID1A-201ENST00000324856 IFFO1Q0D2I5 559 aa21.56■■□□□ 1.04
ARID1A-201ENST00000324856 SMARCC1Q92922 1105 aaPredicted RBP21.56■■□□□ 1.04
ARID1A-201ENST00000324856 DIAPH1O60610 1272 aaKnown RBP21.56■■□□□ 1.04
ARID1A-201ENST00000324856 LARP1BQ659C4 914 aaKnown RBP21.56■■□□□ 1.04
ARID1A-201ENST00000324856 ERCC6Q03468 1493 aa21.55■■□□□ 1.04
ARID1A-201ENST00000324856 ANKRD18BA2A2Z9 1011 aa21.55■■□□□ 1.04
ARID1A-201ENST00000324856 PANK1Q8TE04 598 aa21.55■■□□□ 1.04
ARID1A-201ENST00000324856 CPSF2Q9P2I0 782 aaKnown RBP21.55■■□□□ 1.04
ARID1A-201ENST00000324856 SYCE3A1L190 88 aa21.55■■□□□ 1.04
ARID1A-201ENST00000324856 ZHX1Q9UKY1 873 aaPredicted RBP21.55■■□□□ 1.04
ARID1A-201ENST00000324856 CFAP100Q494V2 611 aa21.55■■□□□ 1.04
ARID1A-201ENST00000324856 CCDC7Q96M83 1385 aa21.55■■□□□ 1.04
ARID1A-201ENST00000324856 SMARCA2P51531 1590 aa21.55■■□□□ 1.04
ARID1A-201ENST00000324856 SEPT6Q14141 434 aa21.55■■□□□ 1.04
ARID1A-201ENST00000324856 KANK4Q5T7N3 995 aaPredicted RBP21.55■■□□□ 1.04
ARID1A-201ENST00000324856 VPS36Q86VN1 386 aa21.55■■□□□ 1.04
ARID1A-201ENST00000324856 SPA17Q15506 151 aa21.54■■□□□ 1.04
ARID1A-201ENST00000324856 MYO10Q9HD67 2058 aa21.54■■□□□ 1.04
ARID1A-201ENST00000324856 CTAGE5O15320 804 aa21.54■■□□□ 1.04
ARID1A-201ENST00000324856 KRT18P05783 430 aaKnown RBP21.54■■□□□ 1.04
ARID1A-201ENST00000324856 TBC1D2BQ9UPU7 963 aa21.54■■□□□ 1.04
ARID1A-201ENST00000324856 RNF187Q5TA31 235 aaPredicted RBP21.54■■□□□ 1.04
ARID1A-201ENST00000324856 FSD1Q9BTV5 496 aa21.53■■□□□ 1.04
ARID1A-201ENST00000324856 PPP6R1Q9UPN7 881 aa21.53■■□□□ 1.04
ARID1A-201ENST00000324856 DAAM2Q86T65 1068 aa21.52■■□□□ 1.04
ARID1A-201ENST00000324856 GTF2F1P35269 517 aaKnown RBP eCLIP21.52■■□□□ 1.046e-8■■■□□ 18.7
ARID1A-201ENST00000324856 EID1Q9Y6B2 187 aa21.52■■□□□ 1.03
ARID1A-201ENST00000324856 WASHC4Q2M389 1173 aa21.51■■□□□ 1.03
ARID1A-201ENST00000324856 SMG6Q86US8 1419 aaKnown RBP21.51■■□□□ 1.03
ARID1A-201ENST00000324856 WDR66Q8TBY9 1149 aa21.51■■□□□ 1.03
ARID1A-201ENST00000324856 RRBP1Q9P2E9 1410 aaKnown RBP21.51■■□□□ 1.03
ARID1A-201ENST00000324856 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.51■■□□□ 1.03
ARID1A-201ENST00000324856 V9GYY5 206 aaPredicted RBP21.51■■□□□ 1.03
ARID1A-201ENST00000324856 ZSCAN31Q96LW9 406 aaPredicted RBP21.51■■□□□ 1.03
ARID1A-201ENST00000324856 SETSIPP0DME0 302 aa21.51■■□□□ 1.03
ARID1A-201ENST00000324856 WASHC2AQ641Q2 1341 aa21.51■■□□□ 1.03
ARID1A-201ENST00000324856 WASHC2CQ9Y4E1 1318 aa21.51■■□□□ 1.03
ARID1A-201ENST00000324856 PPP1R12BO60237 982 aaPredicted RBP21.5■■□□□ 1.03
ARID1A-201ENST00000324856 GGT6Q6P531 493 aa21.5■■□□□ 1.03
ARID1A-201ENST00000324856 FAM114A1Q8IWE2 563 aa21.5■■□□□ 1.03
ARID1A-201ENST00000324856 CEBPZQ03701 1054 aaKnown RBP21.5■■□□□ 1.03
ARID1A-201ENST00000324856 STAC3Q96MF2 364 aa21.5■■□□□ 1.03
ARID1A-201ENST00000324856 KRT32Q14532 448 aa21.5■■□□□ 1.03
ARID1A-201ENST00000324856 DDX12PQ92771 950 aa21.5■■□□□ 1.03
ARID1A-201ENST00000324856 SCAND2PQ9GZW5 306 aaPredicted RBP21.5■■□□□ 1.03
ARID1A-201ENST00000324856 CEP131Q9UPN4 1083 aa21.5■■□□□ 1.03
ARID1A-201ENST00000324856 PAFAH1B1P43034 410 aa21.49■■□□□ 1.03
ARID1A-201ENST00000324856 ARFGAP3Q9NP61 516 aa21.49■■□□□ 1.03
ARID1A-201ENST00000324856 EHBP1Q8NDI1 1231 aa21.49■■□□□ 1.03
ARID1A-201ENST00000324856 ANO10Q9NW15 660 aa21.49■■□□□ 1.03
ARID1A-201ENST00000324856 SWAP70Q9UH65 585 aa21.49■■□□□ 1.03
ARID1A-201ENST00000324856 EIF5P55010 431 aaKnown RBP21.49■■□□□ 1.03
ARID1A-201ENST00000324856 LMAN1P49257 510 aa21.49■■□□□ 1.03
ARID1A-201ENST00000324856 BMP2KQ9NSY1 1161 aaPredicted RBP21.49■■□□□ 1.03
ARID1A-201ENST00000324856 TNNT1P13805 278 aa21.49■■□□□ 1.03
ARID1A-201ENST00000324856 PAF1Q8N7H5 531 aa21.48■■□□□ 1.03
ARID1A-201ENST00000324856 TANGO6Q9C0B7 1094 aa21.48■■□□□ 1.03
ARID1A-201ENST00000324856 POTEJP0CG39 1038 aa21.48■■□□□ 1.03
ARID1A-201ENST00000324856 TRIM21P19474 475 aaKnown RBP21.48■■□□□ 1.03
ARID1A-201ENST00000324856 POLA1P09884 1462 aaPredicted RBP21.48■■□□□ 1.03
ARID1A-201ENST00000324856 NOL7Q9UMY1 257 aaKnown RBP21.48■■□□□ 1.03
ARID1A-201ENST00000324856 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.48■■□□□ 1.038e-7■■□□□ 12.9
ARID1A-201ENST00000324856 AKNAQ7Z591 1439 aa21.47■■□□□ 1.03
ARID1A-201ENST00000324856 EFCAB2Q5VUJ9 269 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms