RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 RPAP2Q8IXW5 612 aaPredicted RBP24.9■■□□□ 1.58
LTBP3-201ENST00000301873 ERC1Q8IUD2 1116 aa24.9■■□□□ 1.58
LTBP3-201ENST00000301873 TRIM5Q9C035 493 aa24.9■■□□□ 1.58
LTBP3-201ENST00000301873 ZC3H6P61129 1189 aaKnown RBP24.89■■□□□ 1.58
LTBP3-201ENST00000301873 NME9Q86XW9 330 aa24.89■■□□□ 1.58
LTBP3-201ENST00000301873 MCM4P33991 863 aa24.89■■□□□ 1.58
LTBP3-201ENST00000301873 CCDC141Q6ZP82 1450 aa24.89■■□□□ 1.57
LTBP3-201ENST00000301873 EMILIN1Q9Y6C2 1016 aa24.89■■□□□ 1.57
LTBP3-201ENST00000301873 TPM2P07951 284 aa24.88■■□□□ 1.57
LTBP3-201ENST00000301873 RBM33Q96EV2 1170 aaKnown RBP24.88■■□□□ 1.57
LTBP3-201ENST00000301873 CYP46A1Q9Y6A2 500 aa24.88■■□□□ 1.57
LTBP3-201ENST00000301873 DUSP27Q5VZP5 1158 aa24.88■■□□□ 1.57
LTBP3-201ENST00000301873 TBC1D2BQ9UPU7 963 aa24.88■■□□□ 1.57
LTBP3-201ENST00000301873 RRP12Q5JTH9 1297 aaKnown RBP24.87■■□□□ 1.57
LTBP3-201ENST00000301873 SAMD1Q6SPF0 538 aaPredicted RBP24.87■■□□□ 1.57
LTBP3-201ENST00000301873 CCDC47Q96A33 483 aaKnown RBP24.87■■□□□ 1.57
LTBP3-201ENST00000301873 HIP1O00291 1037 aa24.86■■□□□ 1.57
LTBP3-201ENST00000301873 KINO60870 393 aaKnown RBP24.86■■□□□ 1.57
LTBP3-201ENST00000301873 TOM1L2Q6ZVM7 507 aa24.86■■□□□ 1.57
LTBP3-201ENST00000301873 TRIM34Q9BYJ4 488 aa24.86■■□□□ 1.57
LTBP3-201ENST00000301873 CABP4P57796 275 aa24.86■■□□□ 1.57
LTBP3-201ENST00000301873 FBXO31Q5XUX0 539 aaPredicted RBP24.86■■□□□ 1.57
LTBP3-201ENST00000301873 CWC27Q6UX04 472 aaKnown RBP24.86■■□□□ 1.57
LTBP3-201ENST00000301873 CAMSAP2Q08AD1 1489 aa24.85■■□□□ 1.57
LTBP3-201ENST00000301873 AACSQ86V21 672 aa24.85■■□□□ 1.57
LTBP3-201ENST00000301873 UPF3BQ9BZI7 483 aaKnown RBP24.84■■□□□ 1.57
LTBP3-201ENST00000301873 CWC22Q9HCG8 908 aaKnown RBP24.84■■□□□ 1.57
LTBP3-201ENST00000301873 CNNM1Q9NRU3 951 aa24.84■■□□□ 1.57
LTBP3-201ENST00000301873 SMARCA5O60264 1052 aaPredicted RBP24.83■■□□□ 1.57
LTBP3-201ENST00000301873 BTBD11A6QL63 1104 aa24.83■■□□□ 1.57
LTBP3-201ENST00000301873 PRDM11Q9NQV5 511 aa24.82■■□□□ 1.56
LTBP3-201ENST00000301873 IQGAP2Q13576 1575 aa24.82■■□□□ 1.56
LTBP3-201ENST00000301873 F6X3S4 739 aa24.82■■□□□ 1.56
LTBP3-201ENST00000301873 NUTM1Q86Y26 1132 aa24.82■■□□□ 1.56
LTBP3-201ENST00000301873 CCDC39Q9UFE4 941 aa24.82■■□□□ 1.56
LTBP3-201ENST00000301873 ANKLE2Q86XL3 938 aa24.81■■□□□ 1.56
LTBP3-201ENST00000301873 TSPY26PQ9H489 355 aa24.81■■□□□ 1.56
LTBP3-201ENST00000301873 LARP1BQ659C4 914 aaKnown RBP24.81■■□□□ 1.56
LTBP3-201ENST00000301873 CCDC85AQ96PX6 553 aaPredicted RBP24.81■■□□□ 1.56
LTBP3-201ENST00000301873 CCDC158Q5M9N0 1113 aa24.81■■□□□ 1.56
LTBP3-201ENST00000301873 STK11IPQ8N1F8 1099 aa24.81■■□□□ 1.56
LTBP3-201ENST00000301873 RPRD2Q5VT52 1461 aaKnown RBP24.8■■□□□ 1.56
LTBP3-201ENST00000301873 SART3Q15020 963 aaKnown RBP24.8■■□□□ 1.56
LTBP3-201ENST00000301873 BLOC1S2Q6QNY1 142 aa24.8■■□□□ 1.56
LTBP3-201ENST00000301873 STK38Q15208 465 aa24.8■■□□□ 1.56
LTBP3-201ENST00000301873 WDR33Q9C0J8 1336 aaKnown RBP24.8■■□□□ 1.56
LTBP3-201ENST00000301873 FBLN1P23142 703 aa24.79■■□□□ 1.56
LTBP3-201ENST00000301873 FKBP4Q02790 459 aaKnown RBP eCLIP24.79■■□□□ 1.56
LTBP3-201ENST00000301873 KIF6Q6ZMV9 814 aa24.79■■□□□ 1.56
LTBP3-201ENST00000301873 TRIM27P14373 513 aa24.79■■□□□ 1.56
LTBP3-201ENST00000301873 PDILTQ8N807 584 aa24.79■■□□□ 1.56
LTBP3-201ENST00000301873 NAT10Q9H0A0 1025 aaKnown RBP24.79■■□□□ 1.56
LTBP3-201ENST00000301873 GNAT3A8MTJ3 354 aa24.79■■□□□ 1.56
LTBP3-201ENST00000301873 SPC24Q8NBT2 197 aa24.79■■□□□ 1.56
LTBP3-201ENST00000301873 PTPN23Q9H3S7 1636 aa24.79■■□□□ 1.56
LTBP3-201ENST00000301873 JAKMIP1Q96N16 626 aaKnown RBP24.78■■□□□ 1.56
LTBP3-201ENST00000301873 GRPEL1Q9HAV7 217 aa24.78■■□□□ 1.56
LTBP3-201ENST00000301873 XBP1P17861 261 aa24.77■■□□□ 1.56
LTBP3-201ENST00000301873 OLFM4Q6UX06 510 aa24.77■■□□□ 1.56
LTBP3-201ENST00000301873 USHBP1Q8N6Y0 703 aa24.77■■□□□ 1.56
LTBP3-201ENST00000301873 MNS1Q8NEH6 495 aa24.76■■□□□ 1.55
LTBP3-201ENST00000301873 SPG7Q9UQ90 795 aa24.76■■□□□ 1.55
LTBP3-201ENST00000301873 TTC39AQ5SRH9 613 aa24.76■■□□□ 1.55
LTBP3-201ENST00000301873 CEP126Q9P2H0 1117 aa24.76■■□□□ 1.55
LTBP3-201ENST00000301873 CCDC57Q2TAC2 916 aa24.75■■□□□ 1.55
LTBP3-201ENST00000301873 CIZ1Q9ULV3 898 aaPredicted RBP24.75■■□□□ 1.55
LTBP3-201ENST00000301873 KRT85P78386 507 aa24.75■■□□□ 1.55
LTBP3-201ENST00000301873 TCEAL9Q9UHQ7 104 aa24.75■■□□□ 1.55
LTBP3-201ENST00000301873 GPS2Q13227 327 aa24.75■■□□□ 1.55
LTBP3-201ENST00000301873 MAP3K1Q13233 1512 aa24.74■■□□□ 1.55
LTBP3-201ENST00000301873 ZNF771Q7L3S4 317 aaPredicted RBP24.74■■□□□ 1.55
LTBP3-201ENST00000301873 PTCD1O75127 700 aaKnown RBP24.74■■□□□ 1.55
LTBP3-201ENST00000301873 ME1P48163 572 aa24.74■■□□□ 1.55
LTBP3-201ENST00000301873 CCDC70Q6NSX1 233 aa24.74■■□□□ 1.55
LTBP3-201ENST00000301873 DISP3Q9P2K9 1392 aa24.74■■□□□ 1.55
LTBP3-201ENST00000301873 BRMS1Q9HCU9 246 aa24.73■■□□□ 1.55
LTBP3-201ENST00000301873 LETM1O95202 739 aaPredicted RBP24.73■■□□□ 1.55
LTBP3-201ENST00000301873 MEX3CQ5U5Q3 659 aaKnown RBP24.73■■□□□ 1.55
LTBP3-201ENST00000301873 NKTRP30414 1462 aaKnown RBP24.73■■□□□ 1.55
LTBP3-201ENST00000301873 SMC2O95347 1197 aa24.73■■□□□ 1.55
LTBP3-201ENST00000301873 ALDH1L2Q3SY69 923 aa24.73■■□□□ 1.55
LTBP3-201ENST00000301873 FERMT3Q86UX7 667 aa24.73■■□□□ 1.55
LTBP3-201ENST00000301873 FOXO3O43524 673 aa24.72■■□□□ 1.55
LTBP3-201ENST00000301873 CD109Q6YHK3 1445 aa24.72■■□□□ 1.55
LTBP3-201ENST00000301873 CCDC173Q0VFZ6 552 aa24.72■■□□□ 1.55
LTBP3-201ENST00000301873 CTDP1Q9Y5B0 961 aaPredicted RBP24.72■■□□□ 1.55
LTBP3-201ENST00000301873 PTPRKQ15262 1439 aa24.72■■□□□ 1.55
LTBP3-201ENST00000301873 LRPPRCP42704 1394 aaKnown RBP24.71■■□□□ 1.55
LTBP3-201ENST00000301873 ANKRD1Q15327 319 aa24.71■■□□□ 1.55
LTBP3-201ENST00000301873 TAF7Q15545 349 aaPredicted RBP24.71■■□□□ 1.55
LTBP3-201ENST00000301873 PDRG1Q9NUG6 133 aa24.71■■□□□ 1.55
LTBP3-201ENST00000301873 MX1P20591 662 aa24.71■■□□□ 1.55
LTBP3-201ENST00000301873 IGHDP01880 384 aa24.71■■□□□ 1.55
LTBP3-201ENST00000301873 TTLL5Q6EMB2 1281 aa24.7■■□□□ 1.55
LTBP3-201ENST00000301873 KIF1BPQ96EK5 621 aa24.7■■□□□ 1.54
LTBP3-201ENST00000301873 MPHOSPH8Q99549 860 aa24.7■■□□□ 1.54
LTBP3-201ENST00000301873 WASLO00401 505 aaPredicted RBP24.7■■□□□ 1.54
LTBP3-201ENST00000301873 CEBPAP49715 358 aaPredicted RBP24.7■■□□□ 1.54
LTBP3-201ENST00000301873 ZNF396Q96N95 335 aaPredicted RBP24.7■■□□□ 1.54
LTBP3-201ENST00000301873 TBC1D2Q9BYX2 928 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms