RNA–Protein interactions for RNA: ENST00000288873.7

KRTCAP3-201, Transcript of keratinocyte associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRTCAP3, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-201ENST00000288873 UNC5CLQ8IV45 518 aa26.24■■□□□ 1.79
KRTCAP3-201ENST00000288873 CAMTA1Q9Y6Y1 1673 aa26.24■■□□□ 1.79
KRTCAP3-201ENST00000288873 NRAPQ86VF7 1730 aa26.22■■□□□ 1.79
KRTCAP3-201ENST00000288873 AMPHP49418 695 aa26.22■■□□□ 1.79
KRTCAP3-201ENST00000288873 AXIN2Q9Y2T1 843 aa26.22■■□□□ 1.79
KRTCAP3-201ENST00000288873 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.22■■□□□ 1.79
KRTCAP3-201ENST00000288873 MAP2P11137 1827 aaKnown RBP26.21■■□□□ 1.79
KRTCAP3-201ENST00000288873 RGPD5Q99666 1765 aa26.21■■□□□ 1.79
KRTCAP3-201ENST00000288873 ABCC6O95255 1503 aa26.2■■□□□ 1.79
KRTCAP3-201ENST00000288873 IP6K1Q92551 441 aa26.2■■□□□ 1.78
KRTCAP3-201ENST00000288873 QTRT2Q9H974 415 aaKnown RBP26.2■■□□□ 1.78
KRTCAP3-201ENST00000288873 EVA1CP58658 441 aa26.19■■□□□ 1.78
KRTCAP3-201ENST00000288873 STRN4Q9NRL3 753 aa26.19■■□□□ 1.78
KRTCAP3-201ENST00000288873 EMILIN1Q9Y6C2 1016 aa26.19■■□□□ 1.78
KRTCAP3-201ENST00000288873 RXRBP28702 533 aa26.18■■□□□ 1.78
KRTCAP3-201ENST00000288873 POLKQ9UBT6 870 aa26.18■■□□□ 1.78
KRTCAP3-201ENST00000288873 PPM1GO15355 546 aaPredicted RBP26.17■■□□□ 1.78
KRTCAP3-201ENST00000288873 HOXC9P31274 260 aa26.17■■□□□ 1.78
KRTCAP3-201ENST00000288873 TRPC5Q9UL62 973 aaPredicted RBP26.17■■□□□ 1.78
KRTCAP3-201ENST00000288873 RTL1A6NKG5 1358 aa26.17■■□□□ 1.78
KRTCAP3-201ENST00000288873 COL5A2P05997 1499 aaPredicted RBP26.17■■□□□ 1.78
KRTCAP3-201ENST00000288873 CDK12Q9NYV4 1490 aaPredicted RBP26.17■■□□□ 1.78
KRTCAP3-201ENST00000288873 PEAK1Q9H792 1746 aa26.17■■□□□ 1.78
KRTCAP3-201ENST00000288873 ATRNO75882 1429 aa26.16■■□□□ 1.78
KRTCAP3-201ENST00000288873 VPS72Q15906 364 aa26.15■■□□□ 1.78
KRTCAP3-201ENST00000288873 CCDC9Q9Y3X0 531 aaKnown RBP26.15■■□□□ 1.78
KRTCAP3-201ENST00000288873 BLMP54132 1417 aaPredicted RBP26.14■■□□□ 1.78
KRTCAP3-201ENST00000288873 FLT4P35916 1363 aa26.14■■□□□ 1.78
KRTCAP3-201ENST00000288873 KIF24Q5T7B8 1368 aa26.14■■□□□ 1.78
KRTCAP3-201ENST00000288873 LARP1Q6PKG0 1096 aaKnown RBP26.13■■□□□ 1.77
KRTCAP3-201ENST00000288873 CSB-PGBD3P0DP91 1061 aa26.12■■□□□ 1.77
KRTCAP3-201ENST00000288873 HSP90AB2PQ58FF8 381 aa26.11■■□□□ 1.77
KRTCAP3-201ENST00000288873 ANKRD24Q8TF21 1146 aa26.11■■□□□ 1.77
KRTCAP3-201ENST00000288873 LTV1Q96GA3 475 aaPredicted RBP26.11■■□□□ 1.77
KRTCAP3-201ENST00000288873 WDR17Q8IZU2 1322 aa26.11■■□□□ 1.77
KRTCAP3-201ENST00000288873 UPF1Q92900 1129 aaKnown RBP eCLIP26.1■■□□□ 1.77
KRTCAP3-201ENST00000288873 GJD4Q96KN9 370 aaPredicted RBP26.1■■□□□ 1.77
KRTCAP3-201ENST00000288873 SMG6Q86US8 1419 aaKnown RBP26.1■■□□□ 1.77
KRTCAP3-201ENST00000288873 INSRP06213 1382 aa26.09■■□□□ 1.77
KRTCAP3-201ENST00000288873 ERBB3P21860 1342 aa26.09■■□□□ 1.77
KRTCAP3-201ENST00000288873 SPATA31A5Q5VU36 1347 aa26.09■■□□□ 1.77
KRTCAP3-201ENST00000288873 SPATA31A7Q8IWB4 1347 aa26.09■■□□□ 1.77
KRTCAP3-201ENST00000288873 RBM6P78332 1123 aaKnown RBP26.08■■□□□ 1.77
KRTCAP3-201ENST00000288873 TOM1L2Q6ZVM7 507 aa26.08■■□□□ 1.77
KRTCAP3-201ENST00000288873 PARD3Q8TEW0 1356 aa26.07■■□□□ 1.76
KRTCAP3-201ENST00000288873 CRB1P82279 1406 aa26.07■■□□□ 1.76
KRTCAP3-201ENST00000288873 MTHFSP49914 203 aa26.07■■□□□ 1.76
KRTCAP3-201ENST00000288873 GLI3P10071 1580 aa26.06■■□□□ 1.76
KRTCAP3-201ENST00000288873 SPATA31A1Q5TZJ5 1347 aa26.06■■□□□ 1.76
KRTCAP3-201ENST00000288873 PPP2R1AP30153 589 aa26.05■■□□□ 1.76
KRTCAP3-201ENST00000288873 NLRP2Q9NX02 1062 aa26.05■■□□□ 1.76
KRTCAP3-201ENST00000288873 USP35Q9P2H5 1018 aa26.05■■□□□ 1.76
KRTCAP3-201ENST00000288873 RALBP1Q15311 655 aa26.04■■□□□ 1.76
KRTCAP3-201ENST00000288873 FAM208AQ9UK61 1670 aaKnown RBP26.03■■□□□ 1.76
KRTCAP3-201ENST00000288873 CARD10Q9BWT7 1032 aa26.02■■□□□ 1.76
KRTCAP3-201ENST00000288873 RGPD2P0DJD1 1756 aa26.01■■□□□ 1.75
KRTCAP3-201ENST00000288873 RGS12O14924 1447 aa26■■□□□ 1.75
KRTCAP3-201ENST00000288873 TCP11L2Q8N4U5 519 aa26■■□□□ 1.75
KRTCAP3-201ENST00000288873 EIF4A2Q14240 407 aaKnown RBP25.99■■□□□ 1.75
KRTCAP3-201ENST00000288873 FAM98CQ17RN3 349 aaKnown RBP25.99■■□□□ 1.75
KRTCAP3-201ENST00000288873 PRKRIP1Q9H875 184 aaPredicted RBP25.99■■□□□ 1.75
KRTCAP3-201ENST00000288873 THRAP3Q9Y2W1 955 aaKnown RBP25.98■■□□□ 1.75
KRTCAP3-201ENST00000288873 NBPF6Q5VWK0 638 aa25.97■■□□□ 1.75
KRTCAP3-201ENST00000288873 NBPF4Q96M43 638 aa25.97■■□□□ 1.75
KRTCAP3-201ENST00000288873 BARGINQ6ZT62 677 aa25.96■■□□□ 1.75
KRTCAP3-201ENST00000288873 A0A0G2JS52 829 aa25.95■■□□□ 1.74
KRTCAP3-201ENST00000288873 ONECUT3O60422 494 aaPredicted RBP25.95■■□□□ 1.74
KRTCAP3-201ENST00000288873 MYT1Q01538 1121 aa25.95■■□□□ 1.74
KRTCAP3-201ENST00000288873 CFAP53Q96M91 514 aa25.95■■□□□ 1.74
KRTCAP3-201ENST00000288873 MYBBP1AQ9BQG0 1328 aaKnown RBP25.94■■□□□ 1.74
KRTCAP3-201ENST00000288873 USHBP1Q8N6Y0 703 aa25.94■■□□□ 1.74
KRTCAP3-201ENST00000288873 EYA1Q99502 592 aa25.93■■□□□ 1.74
KRTCAP3-201ENST00000288873 COL3A1P02461 1466 aaPredicted RBP25.92■■□□□ 1.74
KRTCAP3-201ENST00000288873 ANP32CO43423 234 aa25.92■■□□□ 1.74
KRTCAP3-201ENST00000288873 DIAPH1O60610 1272 aaKnown RBP25.92■■□□□ 1.74
KRTCAP3-201ENST00000288873 IL13P35225 146 aa25.92■■□□□ 1.74
KRTCAP3-201ENST00000288873 SEPT12Q8IYM1 358 aa25.92■■□□□ 1.74
KRTCAP3-201ENST00000288873 WNK3Q9BYP7 1800 aa25.92■■□□□ 1.74
KRTCAP3-201ENST00000288873 THSD7AQ9UPZ6 1657 aa25.91■■□□□ 1.74
KRTCAP3-201ENST00000288873 IL2RBP14784 551 aa25.88■■□□□ 1.73
KRTCAP3-201ENST00000288873 CDCA7Q9BWT1 371 aaPredicted RBP25.88■■□□□ 1.73
KRTCAP3-201ENST00000288873 DISP2A7MBM2 1401 aa25.88■■□□□ 1.73
KRTCAP3-201ENST00000288873 IGSF1Q8N6C5 1336 aa25.87■■□□□ 1.73
KRTCAP3-201ENST00000288873 BRWD3Q6RI45 1802 aa25.86■■□□□ 1.73
KRTCAP3-201ENST00000288873 RGPD1P0DJD0 1748 aa25.86■■□□□ 1.73
KRTCAP3-201ENST00000288873 PARP4Q9UKK3 1724 aaKnown RBP25.86■■□□□ 1.73
KRTCAP3-201ENST00000288873 NCAPD2Q15021 1401 aa25.86■■□□□ 1.73
KRTCAP3-201ENST00000288873 U2SURPO15042 1029 aaKnown RBP25.84■■□□□ 1.73
KRTCAP3-201ENST00000288873 RAPGEF4Q8WZA2 1011 aa25.84■■□□□ 1.73
KRTCAP3-201ENST00000288873 NUDCQ9Y266 331 aa25.83■■□□□ 1.73
KRTCAP3-201ENST00000288873 MEGF6O75095 1541 aa25.83■■□□□ 1.72
KRTCAP3-201ENST00000288873 LRRC37A3O60309 1634 aa25.82■■□□□ 1.72
KRTCAP3-201ENST00000288873 TATP17735 454 aaPredicted RBP25.82■■□□□ 1.72
KRTCAP3-201ENST00000288873 DDB1Q16531 1140 aa25.82■■□□□ 1.72
KRTCAP3-201ENST00000288873 SULT6B1Q6IMI4 303 aa25.82■■□□□ 1.72
KRTCAP3-201ENST00000288873 AEBP1Q8IUX7 1158 aa25.81■■□□□ 1.72
KRTCAP3-201ENST00000288873 EXOC5O00471 708 aa25.8■■□□□ 1.72
KRTCAP3-201ENST00000288873 KRT27Q7Z3Y8 459 aa25.8■■□□□ 1.72
KRTCAP3-201ENST00000288873 HMOX1P09601 288 aa25.79■■□□□ 1.72
KRTCAP3-201ENST00000288873 PDE3BQ13370 1112 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms