RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 ADAMTS8Q9UP79 889 aa6.74□□□□□ -1.33
VCAN-201ENST00000265077 CCDC192P0DO97 292 aa6.74□□□□□ -1.33
VCAN-201ENST00000265077 EFCC1Q9HA90 598 aa6.74□□□□□ -1.33
VCAN-201ENST00000265077 POLR3GO15318 223 aaPredicted RBP6.74□□□□□ -1.33
VCAN-201ENST00000265077 ARAP1Q96P48 1450 aa6.74□□□□□ -1.33
VCAN-201ENST00000265077 WDR33Q9C0J8 1336 aaKnown RBP6.74□□□□□ -1.33
VCAN-201ENST00000265077 AMOTL1Q8IY63 956 aa6.74□□□□□ -1.33
VCAN-201ENST00000265077 TRIM5Q9C035 493 aa6.74□□□□□ -1.33
VCAN-201ENST00000265077 IGSF3O75054 1194 aa6.74□□□□□ -1.33
VCAN-201ENST00000265077 MAP2K2P36507 400 aa6.74□□□□□ -1.33
VCAN-201ENST00000265077 RALYLQ86SE5 291 aaKnown RBP6.74□□□□□ -1.33
VCAN-201ENST00000265077 SDF4Q9BRK5 362 aa6.73□□□□□ -1.33
VCAN-201ENST00000265077 CENPHQ9H3R5 247 aa6.73□□□□□ -1.33
VCAN-201ENST00000265077 ZKSCAN5Q9Y2L8 839 aa6.73□□□□□ -1.33
VCAN-201ENST00000265077 KIAA1107Q9UPP5 1409 aa6.73□□□□□ -1.33
VCAN-201ENST00000265077 ZBTB12Q9Y330 459 aaPredicted RBP6.73□□□□□ -1.33
VCAN-201ENST00000265077 C10orf67Q8IYJ2 551 aa6.73□□□□□ -1.33
VCAN-201ENST00000265077 PTPRGP23470 1445 aa6.73□□□□□ -1.33
VCAN-201ENST00000265077 NFXL1Q6ZNB6 911 aa6.73□□□□□ -1.33
VCAN-201ENST00000265077 SRCIN1Q9C0H9 1055 aa6.73□□□□□ -1.33
VCAN-201ENST00000265077 POLA1P09884 1462 aaPredicted RBP6.73□□□□□ -1.33
VCAN-201ENST00000265077 PANK1Q8TE04 598 aa6.73□□□□□ -1.33
VCAN-201ENST00000265077 ZNF396Q96N95 335 aaPredicted RBP6.73□□□□□ -1.33
VCAN-201ENST00000265077 DRC1Q96MC2 740 aa6.73□□□□□ -1.33
VCAN-201ENST00000265077 ERLIN1O75477 346 aa6.73□□□□□ -1.33
VCAN-201ENST00000265077 ARHGAP5Q13017 1502 aa6.73□□□□□ -1.33
VCAN-201ENST00000265077 FKBP5Q13451 457 aaPredicted RBP6.72□□□□□ -1.33
VCAN-201ENST00000265077 GBP6Q6ZN66 633 aa6.72□□□□□ -1.33
VCAN-201ENST00000265077 SMARCE1Q969G3 411 aa6.72□□□□□ -1.33
VCAN-201ENST00000265077 ERC1Q8IUD2 1116 aa6.72□□□□□ -1.33
VCAN-201ENST00000265077 LTV1Q96GA3 475 aaPredicted RBP6.72□□□□□ -1.33
VCAN-201ENST00000265077 ANKRD1Q15327 319 aa6.72□□□□□ -1.33
VCAN-201ENST00000265077 UBXN4Q92575 508 aa6.72□□□□□ -1.33
VCAN-201ENST00000265077 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.72□□□□□ -1.33
VCAN-201ENST00000265077 PNISRQ8TF01 805 aaKnown RBP6.72□□□□□ -1.33
VCAN-201ENST00000265077 ERICH2A1L162 156 aa6.72□□□□□ -1.33
VCAN-201ENST00000265077 TSPYL4Q9UJ04 414 aa6.72□□□□□ -1.33
VCAN-201ENST00000265077 EPS15P42566 896 aa6.72□□□□□ -1.33
VCAN-201ENST00000265077 ELL2O00472 640 aaPredicted RBP6.72□□□□□ -1.33
VCAN-201ENST00000265077 MAP3K1Q13233 1512 aa6.72□□□□□ -1.33
VCAN-201ENST00000265077 K7ELQ4 463 aaPredicted RBP6.72□□□□□ -1.33
VCAN-201ENST00000265077 UBTFL1P0CB47 393 aaPredicted RBP6.72□□□□□ -1.33
VCAN-201ENST00000265077 VPS53Q5VIR6 699 aa6.72□□□□□ -1.33
VCAN-201ENST00000265077 GOLGA6L7A0A1B0GV03 622 aa6.71□□□□□ -1.33
VCAN-201ENST00000265077 XBP1P17861 261 aa6.71□□□□□ -1.33
VCAN-201ENST00000265077 PPP2R1AP30153 589 aa6.71□□□□□ -1.33
VCAN-201ENST00000265077 ZNF428Q96B54 188 aa6.71□□□□□ -1.33
VCAN-201ENST00000265077 ATP6V1AP38606 617 aa6.71□□□□□ -1.33
VCAN-201ENST00000265077 PIP4K2AP48426 406 aaPredicted RBP6.71□□□□□ -1.33
VCAN-201ENST00000265077 BRMS1Q9HCU9 246 aa6.71□□□□□ -1.33
VCAN-201ENST00000265077 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.71□□□□□ -1.33
VCAN-201ENST00000265077 TTC5Q8N0Z6 440 aa6.71□□□□□ -1.33
VCAN-201ENST00000265077 CLASRPQ8N2M8 674 aaKnown RBP6.71□□□□□ -1.33
VCAN-201ENST00000265077 C9orf84Q5VXU9 1444 aa6.71□□□□□ -1.34
VCAN-201ENST00000265077 FILIP1Q7Z7B0 1213 aa6.71□□□□□ -1.34
VCAN-201ENST00000265077 JMYQ8N9B5 988 aa6.71□□□□□ -1.34
VCAN-201ENST00000265077 LMAN1P49257 510 aa6.71□□□□□ -1.34
VCAN-201ENST00000265077 MPNDQ8N594 471 aa6.71□□□□□ -1.34
VCAN-201ENST00000265077 FMNL3Q8IVF7 1028 aa6.71□□□□□ -1.34
VCAN-201ENST00000265077 GNAI3P08754 354 aa6.71□□□□□ -1.34
VCAN-201ENST00000265077 IGF1RP08069 1367 aa6.71□□□□□ -1.34
VCAN-201ENST00000265077 PRPF40AO75400 957 aaKnown RBP6.71□□□□□ -1.34
VCAN-201ENST00000265077 TICAM2Q86XR7 235 aa6.71□□□□□ -1.34
VCAN-201ENST00000265077 SPC24Q8NBT2 197 aa6.71□□□□□ -1.34
VCAN-201ENST00000265077 PAXBP1Q9Y5B6 917 aa6.71□□□□□ -1.34
VCAN-201ENST00000265077 SHTN1A0MZ66 631 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 SART3Q15020 963 aaKnown RBP6.7□□□□□ -1.34
VCAN-201ENST00000265077 CAGE1Q8TC20 777 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 SMC2O95347 1197 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 NAP1L1P55209 391 aaKnown RBP6.7□□□□□ -1.34
VCAN-201ENST00000265077 KIF18AQ8NI77 898 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 TMX1Q9H3N1 280 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 V9GYY5 206 aaPredicted RBP6.7□□□□□ -1.34
VCAN-201ENST00000265077 CFTRP13569 1480 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 A0A1B0GUA9 196 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 GBP2P32456 591 aaPredicted RBP6.7□□□□□ -1.34
VCAN-201ENST00000265077 RPAINQ86UA6 219 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 MYRIPQ8NFW9 859 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 GAS2L2Q8NHY3 880 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 PDZRN3Q9UPQ7 1066 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 FIBPO43427 364 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 MVPQ14764 893 aaKnown RBP6.7□□□□□ -1.34
VCAN-201ENST00000265077 SKIDA1Q1XH10 827 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 AP1ARQ63HQ0 302 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 IQCEQ6IPM2 695 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 ITSN2Q9NZM3 1697 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 NEK4P51957 841 aa6.7□□□□□ -1.34
VCAN-201ENST00000265077 CCT4P50991 539 aaKnown RBP6.7□□□□□ -1.34
VCAN-201ENST00000265077 NOL7Q9UMY1 257 aaKnown RBP6.7□□□□□ -1.34
VCAN-201ENST00000265077 ZRSR2Q15696 482 aaKnown RBP6.69□□□□□ -1.34
VCAN-201ENST00000265077 MINK1Q8N4C8 1332 aaPredicted RBP6.69□□□□□ -1.34
VCAN-201ENST00000265077 LUZP1Q86V48 1076 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 LRRFIP2Q9Y608 721 aaKnown RBP6.69□□□□□ -1.34
VCAN-201ENST00000265077 ZNF853P0CG23 659 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 TXLNAP40222 546 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 ENOX2Q16206 610 aaKnown RBP6.69□□□□□ -1.34
VCAN-201ENST00000265077 UNC13AQ9UPW8 1703 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 CFAP45Q9UL16 551 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 PLEKHH1Q9ULM0 1364 aa6.69□□□□□ -1.34
VCAN-201ENST00000265077 SYCE3A1L190 88 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms