RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 FLT4P35916 1363 aa32.83■■■□□ 2.85
SCN1B-201ENST00000262631 FAM83GA6ND36 823 aa32.82■■■□□ 2.84
SCN1B-201ENST00000262631 IP6K1Q92551 441 aa32.82■■■□□ 2.84
SCN1B-201ENST00000262631 RTL1A6NKG5 1358 aa32.81■■■□□ 2.84
SCN1B-201ENST00000262631 KIF24Q5T7B8 1368 aa32.81■■■□□ 2.84
SCN1B-201ENST00000262631 COL3A1P02461 1466 aaPredicted RBP32.79■■■□□ 2.84
SCN1B-201ENST00000262631 MRS2Q9HD23 443 aa32.78■■■□□ 2.84
SCN1B-201ENST00000262631 COL18A1P39060 1754 aa32.78■■■□□ 2.84
SCN1B-201ENST00000262631 INSRP06213 1382 aa32.78■■■□□ 2.84
SCN1B-201ENST00000262631 CCER2I3L3R5 266 aa32.78■■■□□ 2.84
SCN1B-201ENST00000262631 CFAP53Q96M91 514 aa32.75■■■□□ 2.83
SCN1B-201ENST00000262631 LMO7Q8WWI1 1683 aa32.74■■■□□ 2.83
SCN1B-201ENST00000262631 CAMTA1Q9Y6Y1 1673 aa32.73■■■□□ 2.83
SCN1B-201ENST00000262631 BLMP54132 1417 aaPredicted RBP32.73■■■□□ 2.83
SCN1B-201ENST00000262631 ABCC6O95255 1503 aa32.72■■■□□ 2.83
SCN1B-201ENST00000262631 EIF4A2Q14240 407 aaKnown RBP32.72■■■□□ 2.83
SCN1B-201ENST00000262631 LTV1Q96GA3 475 aaPredicted RBP32.72■■■□□ 2.83
SCN1B-201ENST00000262631 DIAPH1O60610 1272 aaKnown RBP32.7■■■□□ 2.83
SCN1B-201ENST00000262631 COL14A1Q05707 1796 aaKnown RBP32.7■■■□□ 2.82
SCN1B-201ENST00000262631 IL13P35225 146 aa32.69■■■□□ 2.82
SCN1B-201ENST00000262631 C8orf37Q96NL8 207 aa32.69■■■□□ 2.82
SCN1B-201ENST00000262631 BTG4Q9NY30 223 aa32.69■■■□□ 2.82
SCN1B-201ENST00000262631 RGPD5Q99666 1765 aa32.69■■■□□ 2.82
SCN1B-201ENST00000262631 ANKRD24Q8TF21 1146 aa32.68■■■□□ 2.82
SCN1B-201ENST00000262631 ERBB3P21860 1342 aa32.68■■■□□ 2.82
SCN1B-201ENST00000262631 COL5A2P05997 1499 aaPredicted RBP32.66■■■□□ 2.82
SCN1B-201ENST00000262631 MEX3CQ5U5Q3 659 aaKnown RBP32.66■■■□□ 2.82
SCN1B-201ENST00000262631 PNISRQ8TF01 805 aaKnown RBP32.65■■■□□ 2.82
SCN1B-201ENST00000262631 NGLY1Q96IV0 654 aa32.64■■■□□ 2.82
SCN1B-201ENST00000262631 SLIT2O94813 1529 aa32.64■■■□□ 2.81
SCN1B-201ENST00000262631 PLCH1Q4KWH8 1693 aa32.63■■■□□ 2.81
SCN1B-201ENST00000262631 STRN4Q9NRL3 753 aa32.62■■■□□ 2.81
SCN1B-201ENST00000262631 U2SURPO15042 1029 aaKnown RBP32.61■■■□□ 2.81
SCN1B-201ENST00000262631 EYA1Q99502 592 aa32.6■■■□□ 2.81
SCN1B-201ENST00000262631 FNBP4Q8N3X1 1017 aaPredicted RBP32.59■■■□□ 2.81
SCN1B-201ENST00000262631 CSB-PGBD3P0DP91 1061 aa32.59■■■□□ 2.81
SCN1B-201ENST00000262631 NBPF6Q5VWK0 638 aa32.59■■■□□ 2.81
SCN1B-201ENST00000262631 NBPF4Q96M43 638 aa32.59■■■□□ 2.81
SCN1B-201ENST00000262631 NUDCQ9Y266 331 aa32.59■■■□□ 2.81
SCN1B-201ENST00000262631 WDR17Q8IZU2 1322 aa32.58■■■□□ 2.81
SCN1B-201ENST00000262631 EVA1CP58658 441 aa32.58■■■□□ 2.81
SCN1B-201ENST00000262631 LARP1Q6PKG0 1096 aaKnown RBP32.58■■■□□ 2.81
SCN1B-201ENST00000262631 BCL9LQ86UU0 1499 aa32.57■■■□□ 2.8
SCN1B-201ENST00000262631 U2AF1L5P0DN76 240 aaPredicted RBP32.56■■■□□ 2.8
SCN1B-201ENST00000262631 U2AF1Q01081 240 aaKnown RBP eCLIP32.56■■■□□ 2.8
SCN1B-201ENST00000262631 WDR43Q15061 677 aaKnown RBP eCLIP32.56■■■□□ 2.8
SCN1B-201ENST00000262631 RGPD1P0DJD0 1748 aa32.56■■■□□ 2.8
SCN1B-201ENST00000262631 IGSF1Q8N6C5 1336 aa32.56■■■□□ 2.8
SCN1B-201ENST00000262631 FAM9BQ8IZU0 186 aa32.56■■■□□ 2.8
SCN1B-201ENST00000262631 USHBP1Q8N6Y0 703 aa32.56■■■□□ 2.8
SCN1B-201ENST00000262631 ADAMTS8Q9UP79 889 aa32.56■■■□□ 2.8
SCN1B-201ENST00000262631 NRAPQ86VF7 1730 aa32.55■■■□□ 2.8
SCN1B-201ENST00000262631 NWD2Q9ULI1 1742 aa32.55■■■□□ 2.8
SCN1B-201ENST00000262631 NLRP2Q9NX02 1062 aa32.54■■■□□ 2.8
SCN1B-201ENST00000262631 AEBP1Q8IUX7 1158 aa32.53■■■□□ 2.8
SCN1B-201ENST00000262631 RGPD2P0DJD1 1756 aa32.53■■■□□ 2.8
SCN1B-201ENST00000262631 AFF2P51816 1311 aa32.53■■■□□ 2.8
SCN1B-201ENST00000262631 HMOX1P09601 288 aa32.53■■■□□ 2.8
SCN1B-201ENST00000262631 UNC5CLQ8IV45 518 aa32.53■■■□□ 2.8
SCN1B-201ENST00000262631 TOM1L2Q6ZVM7 507 aa32.52■■■□□ 2.8
SCN1B-201ENST00000262631 SULT6B1Q6IMI4 303 aa32.51■■■□□ 2.79
SCN1B-201ENST00000262631 USP21Q9UK80 565 aa32.51■■■□□ 2.79
SCN1B-201ENST00000262631 CRB1P82279 1406 aa32.49■■■□□ 2.79
SCN1B-201ENST00000262631 NCAPD2Q15021 1401 aa32.48■■■□□ 2.79
SCN1B-201ENST00000262631 FAM208AQ9UK61 1670 aaKnown RBP32.47■■■□□ 2.79
SCN1B-201ENST00000262631 KDRP35968 1356 aa32.47■■■□□ 2.79
SCN1B-201ENST00000262631 CARD10Q9BWT7 1032 aa32.46■■■□□ 2.79
SCN1B-201ENST00000262631 RSPH6AQ9H0K4 717 aa32.46■■■□□ 2.79
SCN1B-201ENST00000262631 USP35Q9P2H5 1018 aa32.46■■■□□ 2.79
SCN1B-201ENST00000262631 FCHSD2O94868 740 aa32.43■■■□□ 2.78
SCN1B-201ENST00000262631 VPS72Q15906 364 aa32.42■■■□□ 2.78
SCN1B-201ENST00000262631 CCDC146Q8IYE0 955 aa32.42■■■□□ 2.78
SCN1B-201ENST00000262631 SPATA31A1Q5TZJ5 1347 aa32.41■■■□□ 2.78
SCN1B-201ENST00000262631 SPATA31A5Q5VU36 1347 aa32.41■■■□□ 2.78
SCN1B-201ENST00000262631 SPATA31A7Q8IWB4 1347 aa32.41■■■□□ 2.78
SCN1B-201ENST00000262631 PRKAR2BP31323 418 aa32.41■■■□□ 2.78
SCN1B-201ENST00000262631 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.41■■■□□ 2.78
SCN1B-201ENST00000262631 PLEKHF1Q96S99 279 aa32.4■■■□□ 2.78
SCN1B-201ENST00000262631 CCDC9Q9Y3X0 531 aaKnown RBP32.4■■■□□ 2.78
SCN1B-201ENST00000262631 PHACTR3Q96KR7 559 aa32.37■■■□□ 2.77
SCN1B-201ENST00000262631 ATRNO75882 1429 aa32.36■■■□□ 2.77
SCN1B-201ENST00000262631 MEGF6O75095 1541 aa32.36■■■□□ 2.77
SCN1B-201ENST00000262631 TCP11L2Q8N4U5 519 aa32.36■■■□□ 2.77
SCN1B-201ENST00000262631 TRPC5Q9UL62 973 aaPredicted RBP32.34■■■□□ 2.77
SCN1B-201ENST00000262631 SENP3-EIF4A1A0A087X0R7 540 aa32.34■■■□□ 2.77
SCN1B-201ENST00000262631 QTRT2Q9H974 415 aaKnown RBP32.34■■■□□ 2.77
SCN1B-201ENST00000262631 RAPGEF4Q8WZA2 1011 aa32.33■■■□□ 2.77
SCN1B-201ENST00000262631 RUNDC1Q96C34 613 aa32.33■■■□□ 2.77
SCN1B-201ENST00000262631 RGS17Q9UGC6 210 aaPredicted RBP32.32■■■□□ 2.76
SCN1B-201ENST00000262631 GJD4Q96KN9 370 aaPredicted RBP32.31■■■□□ 2.76
SCN1B-201ENST00000262631 IL2RBP14784 551 aa32.31■■■□□ 2.76
SCN1B-201ENST00000262631 ZNF772Q68DY9 489 aaPredicted RBP32.31■■■□□ 2.76
SCN1B-201ENST00000262631 THRAP3Q9Y2W1 955 aaKnown RBP32.31■■■□□ 2.76
SCN1B-201ENST00000262631 DISP2A7MBM2 1401 aa32.3■■■□□ 2.76
SCN1B-201ENST00000262631 PNNQ9H307 717 aaKnown RBP32.3■■■□□ 2.76
SCN1B-201ENST00000262631 GLI3P10071 1580 aa32.28■■■□□ 2.76
SCN1B-201ENST00000262631 TATP17735 454 aaPredicted RBP32.28■■■□□ 2.76
SCN1B-201ENST00000262631 MAPK8IP3Q9UPT6 1336 aa32.27■■■□□ 2.76
SCN1B-201ENST00000262631 OVOS2A0A0G2JMS6 1433 aa32.27■■■□□ 2.76
SCN1B-201ENST00000262631 APAF1O14727 1248 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms