RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 GOLGA6L9A6NEM1 432 aa9.69□□□□□ -0.86
APOB-201ENST00000233242 TUBB4AP04350 444 aa9.69□□□□□ -0.86
APOB-201ENST00000233242 SLC26A8Q96RN1 970 aa9.69□□□□□ -0.86
APOB-201ENST00000233242 CDKL5O76039 1030 aa9.69□□□□□ -0.86
APOB-201ENST00000233242 SH2B1Q9NRF2 756 aaPredicted RBP9.69□□□□□ -0.86
APOB-201ENST00000233242 CCDC30Q5VVM6 783 aa9.69□□□□□ -0.86
APOB-201ENST00000233242 KRT222Q8N1A0 295 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 IMMTQ16891 758 aaKnown RBP9.68□□□□□ -0.86
APOB-201ENST00000233242 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.68□□□□□ -0.86
APOB-201ENST00000233242 EPB41L2O43491 1005 aaKnown RBP9.68□□□□□ -0.86
APOB-201ENST00000233242 LUZP1Q86V48 1076 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 JAKMIP3Q5VZ66 844 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 CCDC83Q8IWF9 413 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 BMS1Q14692 1282 aaKnown RBP9.68□□□□□ -0.86
APOB-201ENST00000233242 ERICH3Q5RHP9 1530 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 CASKIN1Q8WXD9 1431 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 CBX1P83916 185 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 GTF2E1P29083 439 aaPredicted RBP9.68□□□□□ -0.86
APOB-201ENST00000233242 POLR3GO15318 223 aaPredicted RBP9.68□□□□□ -0.86
APOB-201ENST00000233242 PPP4R3BQ5MIZ7 849 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 PLCD4Q9BRC7 762 aa9.68□□□□□ -0.86
APOB-201ENST00000233242 IVLP07476 585 aa9.67□□□□□ -0.86
APOB-201ENST00000233242 ANKRD50Q9ULJ7 1429 aa9.67□□□□□ -0.86
APOB-201ENST00000233242 SURF6O75683 361 aaKnown RBP9.67□□□□□ -0.86
APOB-201ENST00000233242 RBM33Q96EV2 1170 aaKnown RBP9.67□□□□□ -0.86
APOB-201ENST00000233242 GOLGA6L10A0A0M3HER8 536 aa9.67□□□□□ -0.86
APOB-201ENST00000233242 EIF2S2P20042 333 aaKnown RBP9.67□□□□□ -0.86
APOB-201ENST00000233242 ANO10Q9NW15 660 aa9.67□□□□□ -0.86
APOB-201ENST00000233242 XPCQ01831 940 aaPredicted RBP9.67□□□□□ -0.86
APOB-201ENST00000233242 TRIM22Q8IYM9 498 aa9.67□□□□□ -0.86
APOB-201ENST00000233242 CCDC43Q96MW1 224 aaKnown RBP9.67□□□□□ -0.86
APOB-201ENST00000233242 FOSBP53539 338 aa9.67□□□□□ -0.86
APOB-201ENST00000233242 KIF5CO60282 957 aa9.66□□□□□ -0.86
APOB-201ENST00000233242 TBC1D2BQ9UPU7 963 aa9.66□□□□□ -0.86
APOB-201ENST00000233242 TDRD9Q8NDG6 1382 aaKnown RBP9.66□□□□□ -0.86
APOB-201ENST00000233242 KLHL40Q2TBA0 621 aa9.66□□□□□ -0.86
APOB-201ENST00000233242 NOB1Q9ULX3 412 aaKnown RBP9.66□□□□□ -0.86
APOB-201ENST00000233242 LTV1Q96GA3 475 aaPredicted RBP9.66□□□□□ -0.86
APOB-201ENST00000233242 G3V3G9 751 aa9.66□□□□□ -0.86
APOB-201ENST00000233242 DCAF8Q5TAQ9 597 aa9.66□□□□□ -0.86
APOB-201ENST00000233242 CCDC9Q9Y3X0 531 aaKnown RBP9.66□□□□□ -0.86
APOB-201ENST00000233242 SEPT7Q16181 437 aaKnown RBP9.66□□□□□ -0.86
APOB-201ENST00000233242 TUBB4BP68371 445 aa9.65□□□□□ -0.86
APOB-201ENST00000233242 CCAR1Q8IX12 1150 aaKnown RBP9.65□□□□□ -0.86
APOB-201ENST00000233242 MTHFSP49914 203 aa9.65□□□□□ -0.86
APOB-201ENST00000233242 GAS2L2Q8NHY3 880 aa9.65□□□□□ -0.86
APOB-201ENST00000233242 ENOX2Q16206 610 aaKnown RBP9.65□□□□□ -0.86
APOB-201ENST00000233242 VPS37DQ86XT2 251 aa9.65□□□□□ -0.86
APOB-201ENST00000233242 TNPO1Q92973 898 aaKnown RBP9.65□□□□□ -0.86
APOB-201ENST00000233242 WASHC4Q2M389 1173 aa9.65□□□□□ -0.87
APOB-201ENST00000233242 BCL11BQ9C0K0 894 aaPredicted RBP9.65□□□□□ -0.87
APOB-201ENST00000233242 PDRG1Q9NUG6 133 aa9.65□□□□□ -0.87
APOB-201ENST00000233242 STK11IPQ8N1F8 1099 aa9.65□□□□□ -0.87
APOB-201ENST00000233242 CDK5RAP3Q96JB5 506 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 TBC1D2Q9BYX2 928 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 CENPHQ9H3R5 247 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 TNNT1P13805 278 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 CADPSQ9ULU8 1353 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 SLC3A2P08195 630 aaKnown RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 EXOSC9Q06265 439 aaKnown RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 DDX19AQ9NUU7 478 aaKnown RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 BLOC1S2Q6QNY1 142 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 PRDM10Q9NQV6 1147 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 CLIP2Q9UDT6 1046 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 WASF1Q92558 559 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 CCDC171Q6TFL3 1326 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 CASQ1P31415 396 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 TWISTNBQ3B726 338 aaPredicted RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 RPAP2Q8IXW5 612 aaPredicted RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.64□□□□□ -0.87
APOB-201ENST00000233242 TAF4BQ92750 862 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 CCDC94Q9BW85 323 aaPredicted RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 CTNNA3Q9UI47 895 aa9.64□□□□□ -0.87
APOB-201ENST00000233242 SRRTQ9BXP5 876 aaKnown RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 LRRFIP2Q9Y608 721 aaKnown RBP9.64□□□□□ -0.87
APOB-201ENST00000233242 BRPF1P55201 1214 aaPredicted RBP9.63□□□□□ -0.87
APOB-201ENST00000233242 BCAR3O75815 825 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 SYCP1Q15431 976 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 ZNF397Q8NF99 534 aaPredicted RBP9.63□□□□□ -0.87
APOB-201ENST00000233242 TRIM34Q9BYJ4 488 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 MLECQ14165 292 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 KIAA1328Q86T90 577 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 NOL7Q9UMY1 257 aaKnown RBP9.63□□□□□ -0.87
APOB-201ENST00000233242 GBP2P32456 591 aaPredicted RBP9.63□□□□□ -0.87
APOB-201ENST00000233242 FAM193AP78312 1265 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 CFAP100Q494V2 611 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 SLFN5Q08AF3 891 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 NCOA2Q15596 1464 aa9.63□□□□□ -0.87
APOB-201ENST00000233242 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.63□□□□□ -0.87
APOB-201ENST00000233242 ZHX1Q9UKY1 873 aaPredicted RBP9.62□□□□□ -0.87
APOB-201ENST00000233242 CEP131Q9UPN4 1083 aa9.62□□□□□ -0.87
APOB-201ENST00000233242 WDR97A6NE52 1622 aa9.62□□□□□ -0.87
APOB-201ENST00000233242 NKTRP30414 1462 aaKnown RBP9.62□□□□□ -0.87
APOB-201ENST00000233242 CCDC150Q8NCX0 1101 aa9.62□□□□□ -0.87
APOB-201ENST00000233242 SMAP1Q8IYB5 467 aaPredicted RBP9.62□□□□□ -0.87
APOB-201ENST00000233242 RUSC2Q8N2Y8 1516 aa9.62□□□□□ -0.87
APOB-201ENST00000233242 MINK1Q8N4C8 1332 aaPredicted RBP9.62□□□□□ -0.87
APOB-201ENST00000233242 GTF2F1P35269 517 aaKnown RBP eCLIP9.62□□□□□ -0.871e-25■■■□□ 19
APOB-201ENST00000233242 NEUROD6Q96NK8 337 aa9.62□□□□□ -0.87
APOB-201ENST00000233242 NEFHP12036 1026 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms