RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 RITA1Q96K30 269 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 TIMP4Q99727 224 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 MMRN2Q9H8L6 949 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 RANGRFQ9HD47 186 aaPredicted RBP5.3□□□□□ -1.56
LINC00397-202ENST00000606785 LTB4R2Q9NPC1 389 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 SEC63Q9UGP8 760 aaKnown RBP5.3□□□□□ -1.56
LINC00397-202ENST00000606785 ADAM21Q9UKJ8 722 aa5.3□□□□□ -1.56
LINC00397-202ENST00000606785 FAM237AA0A1B0GTK4 181 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 A8MXE2 369 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 INPPL1O15357 1258 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 RNMTO43148 476 aaKnown RBP5.29□□□□□ -1.56
LINC00397-202ENST00000606785 SLC25A17O43808 307 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 AKAP8O43823 692 aaKnown RBP5.29□□□□□ -1.56
LINC00397-202ENST00000606785 TBCAO75347 108 aaKnown RBP5.29□□□□□ -1.56
LINC00397-202ENST00000606785 TMCC1O94876 653 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 NKX2-2O95096 273 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 AFPP02771 609 aaKnown RBP5.29□□□□□ -1.56
LINC00397-202ENST00000606785 SRPRAP08240 638 aaKnown RBP5.29□□□□□ -1.56
LINC00397-202ENST00000606785 WT1P19544 449 aaPredicted RBP5.29□□□□□ -1.56
LINC00397-202ENST00000606785 MAKP20794 623 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 MCM7P33993 719 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 CTNNA1P35221 906 aaKnown RBP5.29□□□□□ -1.56
LINC00397-202ENST00000606785 PIK3CAP42336 1068 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 CAPZA2P47755 286 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 STAT2P52630 851 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 RAD23AP54725 363 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 GALCP54803 685 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 IKQ13123 557 aaPredicted RBP5.29□□□□□ -1.56
LINC00397-202ENST00000606785 SCARB2Q14108 478 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 DRAP1Q14919 205 aaPredicted RBP5.29□□□□□ -1.56
LINC00397-202ENST00000606785 FBXO42Q6P3S6 717 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 SLFN11Q7Z7L1 901 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 KBTBD6Q86V97 674 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 IGFN1Q86VF2 1251 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 CNPY4Q8N129 248 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 ZNF398Q8TD17 642 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 ELMOD3Q96FG2 381 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 TMEM68Q96MH6 324 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 OR2A14Q96R47 310 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 MRPL1Q9BYD6 325 aaKnown RBP5.29□□□□□ -1.56
LINC00397-202ENST00000606785 PLK3Q9H4B4 646 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 ZWILCHQ9H900 591 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 WDR6Q9NNW5 1121 aaKnown RBP5.29□□□□□ -1.56
LINC00397-202ENST00000606785 WSB2Q9NYS7 404 aaPredicted RBP5.29□□□□□ -1.56
LINC00397-202ENST00000606785 PADI1Q9ULC6 663 aa5.29□□□□□ -1.56
LINC00397-202ENST00000606785 NAP1L2Q9ULW6 460 aaPredicted RBP5.29□□□□□ -1.56
LINC00397-202ENST00000606785 hCG_1809904A0A1W2PP81 198 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 A0A1W2PPE2 198 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 A0A1W2PR64 198 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 SLC22A23A1A5C7 686 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 MGST3O14880 152 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 RNF8O76064 485 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 TPPPO94811 219 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 CD63P08962 238 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 QDPRP09417 244 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 SCG2P13521 617 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 IL7RP16871 459 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 ITGAXP20702 1163 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 PON1P27169 355 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 LIG4P49917 911 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 SLC12A2P55011 1212 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 GRIK3Q13003 919 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 BAATQ14032 418 aaPredicted RBP5.28□□□□□ -1.56
LINC00397-202ENST00000606785 PGM5Q15124 567 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 C15orf59Q2T9L4 293 aaPredicted RBP5.28□□□□□ -1.56
LINC00397-202ENST00000606785 PCGF3Q3KNV8 242 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 C9orf152Q5JTZ5 239 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 LRCH2Q5VUJ6 765 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 PMS2CLQ68D20 193 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 AAGABQ6PD74 315 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 IL27RAQ6UWB1 636 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 CFAP77Q6ZQR2 320 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 CLEC17AQ6ZS10 378 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 FAM47EQ6ZV65 393 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 CHSY1Q86X52 802 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 TMC8Q8IU68 726 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 TTC30BQ8N4P2 665 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 TDRD5Q8NAT2 981 aaKnown RBP5.28□□□□□ -1.56
LINC00397-202ENST00000606785 APPL2Q8NEU8 664 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 RASSF8Q8NHQ8 419 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 ATOH1Q92858 354 aaPredicted RBP5.28□□□□□ -1.56
LINC00397-202ENST00000606785 ZNF653Q96CK0 615 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 UROC1Q96N76 676 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 SIN3AQ96ST3 1273 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 SETD4Q9NVD3 440 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 C5AR2Q9P296 337 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 SLC17A6Q9P2U8 582 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 CCL27Q9Y4X3 112 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 TRPV2Q9Y5S1 764 aa5.28□□□□□ -1.56
LINC00397-202ENST00000606785 TRBV5-7A0A0A0MS05 114 aa5.27□□□□□ -1.57
LINC00397-202ENST00000606785 TYW5A2RUC4 315 aaKnown RBP5.27□□□□□ -1.57
LINC00397-202ENST00000606785 DDTLA6NHG4 134 aaPredicted RBP5.27□□□□□ -1.57
LINC00397-202ENST00000606785 HSPB2A8KAH6 182 aa5.27□□□□□ -1.57
LINC00397-202ENST00000606785 KLRF2D3W0D1 207 aa5.27□□□□□ -1.57
LINC00397-202ENST00000606785 PAPSS1O43252 624 aaPredicted RBP5.27□□□□□ -1.57
LINC00397-202ENST00000606785 WNT1P04628 370 aa5.27□□□□□ -1.57
LINC00397-202ENST00000606785 PTMAP06454 111 aaKnown RBP5.27□□□□□ -1.57
LINC00397-202ENST00000606785 CYP2A6P11509 494 aaPredicted RBP5.27□□□□□ -1.57
LINC00397-202ENST00000606785 ZNF182P17025 639 aaPredicted RBP5.27□□□□□ -1.57
LINC00397-202ENST00000606785 CTPS1P17812 591 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms