RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 GEMP55040 296 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 ZNF252P-AS1Q0IIN9 211 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 FSTL1Q12841 308 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 CDC16Q13042 620 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 CBLBQ13191 982 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 KCNJ11Q14654 390 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 CCL15Q16663 113 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 CNPY1Q3B7I2 92 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 SPATS1Q496A3 300 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 ACSBG2Q5FVE4 666 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 C10orf107Q8IVU9 208 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 GDPD5Q8WTR4 605 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 PBXIP1Q96AQ6 731 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 ADAM28Q9UKQ2 775 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 SPATA2Q9UM82 520 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 E7ESA3 106 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 TNFRSF10BO14763 440 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 PAPSS1O43252 624 aaPredicted RBP10.51□□□□□ -0.73
LIG1-220ENST00000601091 USP2O75604 605 aaPredicted RBP10.51□□□□□ -0.73
LIG1-220ENST00000601091 GABBR2O75899 941 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 SNX4O95219 450 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 NEK3P51956 506 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 GSTA3Q16772 222 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 ZNF792Q3KQV3 632 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 SCARA3Q6AZY7 606 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 ARHGAP11AQ6P4F7 1023 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 ILDR2Q71H61 639 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 GIPC3Q8TF64 312 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 CAPSLQ8WWF8 208 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 GAS2L1Q99501 681 aaPredicted RBP10.51□□□□□ -0.73
LIG1-220ENST00000601091 APBA2Q99767 749 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 ZNF395Q9H8N7 513 aaPredicted RBP10.51□□□□□ -0.73
LIG1-220ENST00000601091 FNDC3AQ9Y2H6 1198 aaKnown RBP10.51□□□□□ -0.73
LIG1-220ENST00000601091 YBX3P16989 372 aaKnown RBP eCLIP10.5□□□□□ -0.73
LIG1-220ENST00000601091 ABCG1P45844 678 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 ARPP19P56211 112 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 SLC25A52Q3SY17 297 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 AAGABQ6PD74 315 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 TNS4Q8IZW8 715 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 ANKRD53Q8N9V6 530 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 PCYOX1LQ8NBM8 494 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 URGCPQ8TCY9 931 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 TRPC4APQ8TEL6 797 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 DNAJB3Q8WWF6 145 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 EDEM1Q92611 657 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 SDCCAG3Q96C92 435 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 PABPC5Q96DU9 382 aaKnown RBP10.5□□□□□ -0.73
LIG1-220ENST00000601091 CELF6Q96J87 481 aaKnown RBP10.5□□□□□ -0.73
LIG1-220ENST00000601091 PCYT2Q99447 389 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 FAM192AQ9GZU8 254 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 ABHD16BQ9H3Z7 469 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 MINDY3Q9H8M7 445 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 GBA2Q9HCG7 927 aaPredicted RBP10.5□□□□□ -0.73
LIG1-220ENST00000601091 PNPOQ9NVS9 261 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 LUZP4Q9P127 313 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 SIX4Q9UIU6 781 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 PTBP2Q9UKA9 531 aaKnown RBP10.5□□□□□ -0.73
LIG1-220ENST00000601091 DERAQ9Y315 318 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 ADGRA2Q96PE1 1338 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 STRCQ7RTU9 1775 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 TAF4O00268 1085 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 KLF11O14901 512 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 PEX1O43933 1283 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 DNAJB5O75953 348 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 STBD1O95210 358 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 METTL18O95568 372 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 CHRM5P08912 532 aaPredicted RBP10.5□□□□□ -0.73
LIG1-220ENST00000601091 CSH1P0DML2 217 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 CSH2P0DML3 217 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 DBTP11182 482 aaKnown RBP10.5□□□□□ -0.73
LIG1-220ENST00000601091 RAG1P15918 1043 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 NPR3P17342 541 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 PTPN1P18031 435 aaKnown RBP10.5□□□□□ -0.73
LIG1-220ENST00000601091 ERCC2P18074 760 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 NAGLUP54802 743 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 C21orf58P58505 322 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 GABREP78334 506 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 SMARCB1Q12824 385 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 SLC12A1Q13621 1099 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 POU6F1Q14863 301 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 R3HDM1Q15032 1099 aaKnown RBP10.5□□□□□ -0.73
LIG1-220ENST00000601091 CA9Q16790 459 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 ZNF704Q6ZNC4 412 aaPredicted RBP10.5□□□□□ -0.73
LIG1-220ENST00000601091 IGDCC3Q8IVU1 814 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 ANKLE1Q8NAG6 615 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 NETO2Q8NC67 525 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 B3GALNT2Q8NCR0 500 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 GSTCDQ8NEC7 633 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 CCDC126Q96EE4 140 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 QKIQ96PU8 341 aaKnown RBP eCLIP10.5□□□□□ -0.73
LIG1-220ENST00000601091 ULBP1Q9BZM6 244 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 IL22Q9GZX6 179 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 RHBGQ9H310 441 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 SYBUQ9NX95 663 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 RCOR3Q9P2K3 495 aaPredicted RBP10.5□□□□□ -0.73
LIG1-220ENST00000601091 ZNF112Q9UJU3 913 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 CXorf49A8MYA2 514 aaPredicted RBP10.5□□□□□ -0.73
LIG1-220ENST00000601091 TP73O15350 636 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 TBX10O75333 385 aa10.5□□□□□ -0.73
LIG1-220ENST00000601091 B3GAT3O94766 335 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms