RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 ADAMTS14Q8WXS8 1223 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 CENPTQ96BT3 561 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 FAF2Q96CS3 445 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 ECHDC3Q96DC8 303 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 ZNF670Q9BS34 389 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 CALN1Q9BXU9 219 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 KLK13Q9UKR3 277 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 RIOK3O14730 519 aaKnown RBP22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 TRIM16O95361 564 aa22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 CR2P20023 1033 aa22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 SCNN1BP51168 640 aa22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 RENBPP51606 427 aa22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 SUOXP51687 545 aa22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 PDK2Q15119 407 aa22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 TPRG1LQ5T0D9 272 aa22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 BRAT1Q6PJG6 821 aa22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 PTAR1Q7Z6K3 402 aaPredicted RBP22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 ATPAF2Q8N5M1 289 aa22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 PQLC3Q8N755 202 aa22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 DENND6BQ8NEG7 585 aa22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 CXorf40AQ8TE69 158 aa22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 RAPGEF5Q92565 580 aa22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 WRAP53Q9BUR4 548 aaKnown RBP22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 ATP13A3Q9H7F0 1226 aa22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 PCDH12Q9NPG4 1184 aa22.52■■□□□ 1.2
GTF2F1-204ENST00000594965 TRAFD1O14545 582 aaPredicted RBP22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 TNFSF14O43557 240 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 SDC3O75056 442 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 TM7SF2O76062 418 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 PRKCGP05129 697 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 KRT7P08729 469 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 SERPINA4P29622 427 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 ARHGAP25P42331 645 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 ZNF75DP51815 510 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 SEMG2Q02383 582 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 ELP6Q0PNE2 266 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 TCEAL1Q15170 157 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 INAVAQ3KP66 663 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 RHOT2Q8IXI1 618 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 SLC25A45Q8N413 288 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 EID2Q8N6I1 236 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 TP53I13Q8NBR0 393 aaPredicted RBP22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 RFFLQ8WZ73 363 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 TMEM121BQ9BXQ6 578 aaPredicted RBP22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 INTUQ9ULD6 942 aa22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 APOBEC2Q9Y235 224 aaKnown RBP22.51■■□□□ 1.19
GTF2F1-204ENST00000594965 FAM221BA6H8Z2 402 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 FPGTO14772 594 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 XPAP23025 273 aaPredicted RBP22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 KDELR1P24390 212 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 IGFALSP35858 605 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 PFN3P60673 137 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 AP1S1P61966 158 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 BCL2L1Q07817 233 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 GALNT2Q10471 571 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 FZD2Q14332 565 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 ZNF235Q14590 738 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 DCP2Q8IU60 420 aaKnown RBP22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 MRFAP1L1Q96HT8 127 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 MGME1Q9BQP7 344 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 MBNL1Q9NR56 388 aaKnown RBP22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 FTSJ1Q9UET6 329 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 ATP8A1Q9Y2Q0 1164 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 COQ6Q9Y2Z9 468 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 NEUROG3Q9Y4Z2 214 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 LRP4O75096 1905 aa22.5■■□□□ 1.19
GTF2F1-204ENST00000594965 SPEGQ15772 3267 aa22.49■■□□□ 1.19
GTF2F1-204ENST00000594965 GOLGA8CPA6NN73 597 aa22.49■■□□□ 1.19
GTF2F1-204ENST00000594965 MAP3K6O95382 1288 aa22.49■■□□□ 1.19
GTF2F1-204ENST00000594965 HSPA9P38646 679 aaKnown RBP22.49■■□□□ 1.19
GTF2F1-204ENST00000594965 MMP12P39900 470 aa22.49■■□□□ 1.19
GTF2F1-204ENST00000594965 GARSP41250 739 aaKnown RBP22.49■■□□□ 1.19
GTF2F1-204ENST00000594965 RABIFP47224 123 aa22.49■■□□□ 1.19
GTF2F1-204ENST00000594965 MAXP61244 160 aa22.49■■□□□ 1.19
GTF2F1-204ENST00000594965 RALGDSQ12967 914 aa22.49■■□□□ 1.19
GTF2F1-204ENST00000594965 MAP7D3Q8IWC1 876 aa22.49■■□□□ 1.19
GTF2F1-204ENST00000594965 TEX26Q8N6G2 289 aa22.49■■□□□ 1.19
GTF2F1-204ENST00000594965 CNDP2Q96KP4 475 aaKnown RBP22.49■■□□□ 1.19
GTF2F1-204ENST00000594965 NUDCD1Q96RS6 583 aa22.49■■□□□ 1.19
GTF2F1-204ENST00000594965 UCKL1Q9NWZ5 548 aa22.49■■□□□ 1.19
GTF2F1-204ENST00000594965 SPTY2D1-AS1A0A0U1RR47 76 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 C3orf70A6NLC5 250 aaPredicted RBP22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 HTRA2O43464 458 aaPredicted RBP22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 LCA5LO95447 670 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 GIMD1P0DJR0 217 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 C6P13671 934 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 DGKAP23743 735 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 MMP13P45452 471 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 SLC10A2Q12908 348 aaPredicted RBP22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 ZNF542PQ5EBM4 170 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 CFAP58Q5T655 872 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 MARC1Q5VT66 337 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 LRRC49Q8IUZ0 686 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 LRRN4Q8WUT4 740 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 GATA6Q92908 595 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 IFT43Q96FT9 208 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 NOD2Q9HC29 1040 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 KLF15Q9UIH9 416 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 MSRB2Q9Y3D2 182 aa22.48■■□□□ 1.19
GTF2F1-204ENST00000594965 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms