RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 RBBP7Q16576 425 aa13.76□□□□□ -0.21
NDEL1-204ENST00000578172 C6orf10Q5SRN2 563 aa13.76□□□□□ -0.21
NDEL1-204ENST00000578172 PKN3Q6P5Z2 889 aa13.76□□□□□ -0.21
NDEL1-204ENST00000578172 EPGNQ6UW88 154 aa13.76□□□□□ -0.21
NDEL1-204ENST00000578172 MIER2Q8N344 545 aa13.76□□□□□ -0.21
NDEL1-204ENST00000578172 PTGR2Q8N8N7 351 aaPredicted RBP13.76□□□□□ -0.21
NDEL1-204ENST00000578172 AGO3Q9H9G7 860 aaKnown RBP13.76□□□□□ -0.21
NDEL1-204ENST00000578172 DOCK3Q8IZD9 2030 aa13.76□□□□□ -0.21
NDEL1-204ENST00000578172 GON4LQ3T8J9 2241 aa13.76□□□□□ -0.21
NDEL1-204ENST00000578172 ANGPT2O15123 496 aa13.76□□□□□ -0.21
NDEL1-204ENST00000578172 INPP4BO15327 924 aa13.76□□□□□ -0.21
NDEL1-204ENST00000578172 PCID2Q5JVF3 399 aa13.76□□□□□ -0.21
NDEL1-204ENST00000578172 MARC1Q5VT66 337 aa13.76□□□□□ -0.21
NDEL1-204ENST00000578172 CUZD1Q86UP6 607 aa13.76□□□□□ -0.21
NDEL1-204ENST00000578172 AAR2Q9Y312 384 aaKnown RBP13.76□□□□□ -0.21
NDEL1-204ENST00000578172 ANXA9O76027 345 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 RHOBTB1O94844 696 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 GLUD2P49448 558 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 ESRRGP62508 458 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 UGP2Q16851 508 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 ZBTB49Q6ZSB9 765 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 CHST15Q7LFX5 561 aaPredicted RBP13.75□□□□□ -0.21
NDEL1-204ENST00000578172 LRRTM3Q86VH5 581 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 OFCC1Q8IZS5 231 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 TTC9BQ8N6N2 239 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 OR13C4Q8NGS5 318 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 FAM81AQ8TBF8 368 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 WDR6Q9NNW5 1121 aaKnown RBP13.75□□□□□ -0.21
NDEL1-204ENST00000578172 DMAP1Q9NPF5 467 aaPredicted RBP13.75□□□□□ -0.21
NDEL1-204ENST00000578172 NUP214P35658 2090 aaPredicted RBP13.75□□□□□ -0.21
NDEL1-204ENST00000578172 H3BMM5 538 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 SH3BGRLO75368 114 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 GUCA1CO95843 209 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 LHX1P48742 406 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 NPY2RP49146 381 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 SH3BGRP55822 239 aaPredicted RBP13.75□□□□□ -0.21
NDEL1-204ENST00000578172 GRIK3Q13003 919 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 TUBB3Q13509 450 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 GRAMD4Q6IC98 578 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 C16orf87Q6PH81 154 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 C16orf59Q7L2K0 433 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 PDSS2Q86YH6 399 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 LOXHD1Q8IVV2 1947 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 FAM110BQ8TC76 370 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 GRIN3AQ8TCU5 1115 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 ACTRT2Q8TDY3 377 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 VPS33AQ96AX1 596 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 NSUN5Q96P11 429 aaKnown RBP13.75□□□□□ -0.21
NDEL1-204ENST00000578172 SEMA3CQ99985 751 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 UPF3AQ9H1J1 476 aaKnown RBP13.75□□□□□ -0.21
NDEL1-204ENST00000578172 DNAJC28Q9NX36 388 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 IGSF9Q9P2J2 1179 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 PPME1Q9Y570 386 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 ARL5AQ9Y689 179 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 MKI67P46013 3256 aaKnown RBP13.75□□□□□ -0.21
NDEL1-204ENST00000578172 UBXN8O00124 270 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 CRTAMO95727 393 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 SPATA31D3P0C874 917 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 ODC1P11926 461 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 NR4A1P22736 598 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 MSLNQ13421 630 aaPredicted RBP13.75□□□□□ -0.21
NDEL1-204ENST00000578172 TSTA3Q13630 321 aaPredicted RBP13.75□□□□□ -0.21
NDEL1-204ENST00000578172 DPYSQ14117 519 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 SPATA31D4Q6ZUB0 917 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 SPPL2CQ8IUH8 684 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 C2orf69Q8N8R5 385 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 HMCESQ96FZ2 354 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 COQ10BQ9H8M1 238 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 CROCCQ5TZA2 2017 aa13.75□□□□□ -0.21
NDEL1-204ENST00000578172 TRIP12Q14669 1992 aaPredicted RBP13.75□□□□□ -0.21
NDEL1-204ENST00000578172 SRP72O76094 671 aaKnown RBP13.74□□□□□ -0.21
NDEL1-204ENST00000578172 HADHAP40939 763 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 PPIDQ08752 370 aaKnown RBP13.74□□□□□ -0.21
NDEL1-204ENST00000578172 IQSEC1Q6DN90 963 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 UTS2BQ765I0 119 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 MILR1Q7Z6M3 343 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 ABI1Q8IZP0 508 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 PARK7Q99497 189 aaKnown RBP13.74□□□□□ -0.21
NDEL1-204ENST00000578172 OLFM1Q99784 485 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 SPC25Q9HBM1 224 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 HAPLN1P10915 354 aaPredicted RBP13.74□□□□□ -0.21
NDEL1-204ENST00000578172 OR1E1P30953 314 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 MAGEA3P43357 314 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 CDK7P50613 346 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 ARSDP51689 593 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 TWF1Q12792 350 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 SLC44A4Q53GD3 710 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 UBXN11Q5T124 520 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 AGAP9Q5VTM2 703 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 MAMDC4Q6UXC1 1216 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 LINC00523Q86TU6 105 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 CENPLQ8N0S6 344 aaPredicted RBP13.74□□□□□ -0.21
NDEL1-204ENST00000578172 ANKRD49Q8WVL7 239 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 CATSPERBQ9H7T0 1116 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 NMUR1Q9HB89 426 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 CNGB3Q9NQW8 809 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 HACD3Q9P035 362 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 PAIP2BQ9ULR5 123 aaKnown RBP13.74□□□□□ -0.21
NDEL1-204ENST00000578172 SF3B1O75533 1304 aaKnown RBP eCLIP13.74□□□□□ -0.21
NDEL1-204ENST00000578172 GPR39O43194 453 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms