RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 DTNAQ9Y4J8 743 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 GCOM1H8Y6P7 765 aaPredicted RBP5.81□□□□□ -1.48
SF3B3-214ENST00000572365 PIP5K1BO14986 540 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 SPDEFO95238 335 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 GALTP07902 379 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 POLR2MP0CAP2 368 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 SNHG28P0DPA3 235 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 PECAM1P16284 738 aaPredicted RBP5.81□□□□□ -1.48
SF3B3-214ENST00000572365 NOVP48745 357 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 SLC11A1P49279 550 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 PPM1FP49593 454 aaPredicted RBP5.81□□□□□ -1.48
SF3B3-214ENST00000572365 PDE6CP51160 858 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 TIAL1Q01085 375 aaKnown RBP eCLIP5.81□□□□□ -1.48
SF3B3-214ENST00000572365 SCAPQ12770 1279 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 SPDYAQ5MJ70 313 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 TANGO2Q6ICL3 276 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 KBTBD6Q86V97 674 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 PALM2Q8IXS6 379 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 FTSJ3Q8IY81 847 aaKnown RBP5.81□□□□□ -1.48
SF3B3-214ENST00000572365 LRRC43Q8N309 656 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 METTL13Q8N6R0 699 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 ITFG1Q8TB96 612 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 STT3BQ8TCJ2 826 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 STYXQ8WUJ0 223 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 SEPT1Q8WYJ6 367 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 CLDN23Q96B33 292 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 IGSF21Q96ID5 467 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 DDX23Q9BUQ8 820 aaKnown RBP5.81□□□□□ -1.48
SF3B3-214ENST00000572365 TEP1Q99973 2627 aaKnown RBP5.81□□□□□ -1.48
SF3B3-214ENST00000572365 APC2O95996 2303 aa5.81□□□□□ -1.48
SF3B3-214ENST00000572365 ATMQ13315 3056 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 MGAQ8IWI9 3026 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 RRN3P2A6NIE6 340 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 DDX39AO00148 427 aaKnown RBP5.8□□□□□ -1.48
SF3B3-214ENST00000572365 CCL16O15467 120 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 TEX28O15482 410 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 FOXD2O60548 495 aaPredicted RBP5.8□□□□□ -1.48
SF3B3-214ENST00000572365 DDHD2O94830 711 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 HSD3B1P14060 373 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 NPPBP16860 134 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 ZNF20P17024 532 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 PRKAR1BP31321 381 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 UQCRC1P31930 480 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 CCT5P48643 541 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 RNASELQ05823 741 aaKnown RBP5.8□□□□□ -1.48
SF3B3-214ENST00000572365 EFEMP1Q12805 493 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 ABLIM2Q6H8Q1 611 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 LIN54Q6MZP7 749 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 ZNF354CQ86Y25 554 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 GATAD2AQ86YP4 633 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 DEFB124Q8NES8 71 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 SLC30A5Q8TAD4 765 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 TMEM171Q8WVE6 324 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 ATG4AQ8WYN0 398 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 STAMQ92783 540 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 TBC1D20Q96BZ9 403 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 EVI5LQ96CN4 794 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 MCRS1Q96EZ8 462 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 PIGSQ96S52 555 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 ACTRT3Q9BYD9 372 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 TPSD1Q9BZJ3 242 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 ZCWPW1Q9H0M4 648 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 NT5C3AQ9H0P0 336 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 SMARCAD1Q9H4L7 1026 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 PRMT8Q9NR22 394 aaPredicted RBP5.8□□□□□ -1.48
SF3B3-214ENST00000572365 HCFC1R1Q9NWW0 138 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 GPR52Q9Y2T5 361 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 SNX14Q9Y5W7 946 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 SQORQ9Y6N5 450 aa5.8□□□□□ -1.48
SF3B3-214ENST00000572365 SPAARA0A1B0GVQ0 90 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 SMIM35A0A1B0GVV1 85 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 TRIM38O00635 465 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 FIBPO43427 364 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 ASNA1O43681 348 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 ORC4O43929 436 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 CCNT2O60583 730 aaKnown RBP5.79□□□□□ -1.48
SF3B3-214ENST00000572365 TNFRSF6BO95407 300 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 ZNF806P0C7X5 589 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 DHRS4L1P0CG22 281 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 HGFP14210 728 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 PPP3CBP16298 524 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 CXCL12P48061 93 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 CLCN3P51790 818 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 PGDP52209 483 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 NLRP11P59045 1033 aaKnown RBP5.79□□□□□ -1.48
SF3B3-214ENST00000572365 GUCY1B3Q02153 619 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 TROAPQ12815 778 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 ATP1A4Q13733 1029 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 FBLN7Q53RD9 439 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 GPATCH4Q5T3I0 446 aaKnown RBP5.79□□□□□ -1.48
SF3B3-214ENST00000572365 ZNF852Q6ZMS4 543 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 C15orf39Q6ZRI6 1047 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 RHOUQ7L0Q8 258 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 DTX2Q86UW9 622 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 MARCH9Q86YJ5 346 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 ARHGEF19Q8IW93 802 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 LNX2Q8N448 690 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 CHCHD4Q8N4Q1 142 aa5.79□□□□□ -1.48
SF3B3-214ENST00000572365 MBD3L2Q8NHZ7 208 aaPredicted RBP5.79□□□□□ -1.48
SF3B3-214ENST00000572365 OTUD7AQ8TE49 926 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms