RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 HSD3B7Q9H2F3 369 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 TMEM51Q9NW97 253 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 FZD10Q9ULW2 581 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 MFHAS1Q9Y4C4 1052 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 CXorf51AA0A1B0GTR3 108 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 LMO7DNF2Z398 122 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 TPP1O14773 563 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 KLK10O43240 276 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 NSFP46459 744 aaKnown RBP11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 THOP1P52888 689 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 GEMIN4P57678 1058 aaKnown RBP11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 PCBP4P57723 403 aaKnown RBP11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 C19orf57Q0VDD7 668 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 NR0B2Q15466 257 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 ALG11Q2TAA5 492 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 TMEM52BQ4KMG9 183 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 C6orf132Q5T0Z8 1188 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 TRIM72Q6ZMU5 477 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 CAMK1DQ8IU85 385 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 HID1Q8IV36 788 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 PELI3Q8N2H9 469 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 ARFGAP1Q8N6T3 406 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 KYQ8NBH2 561 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 PLA2G15Q8NCC3 412 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 CXorf40AQ8TE69 158 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 SLC46A1Q96NT5 459 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 CCDC3Q9BQI4 270 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 OSBPL1AQ9BXW6 950 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 TRIM7Q9C029 511 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 PDFQ9HBH1 243 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 USP29Q9HBJ7 922 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 PCDH12Q9NPG4 1184 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 SEPT11Q9NVA2 429 aaKnown RBP11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 SIRPGQ9P1W8 387 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 SPASTQ9UBP0 616 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 GULP1Q9UBP9 304 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 OR1A2Q9Y585 309 aa11.67□□□□□ -0.54
PRPF40B-212ENST00000551111 TEX51A0A1B0GUA7 166 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 TTC24A2A3L6 582 aaPredicted RBP11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 WASH4PA8MWX3 477 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 CDRT15L2A8MXV6 281 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 TK2O00142 265 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 AGRPO00253 132 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 ATMINO43313 823 aaPredicted RBP11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 IGSF6O95976 241 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 C6P13671 934 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 GM2AP17900 193 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 ZNF143P52747 638 aaPredicted RBP11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 ERVPABLB-1P60509 514 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 YPEL5P62699 121 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 SKOR1P84550 965 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 LY6DQ14210 128 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 INPP5AQ14642 412 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 NCAPHQ15003 741 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 UGP2Q16851 508 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 INO80DQ53TQ3 878 aaPredicted RBP11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 EFHC2Q5JST6 749 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 DNAJC24Q6P3W2 148 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 MACC1Q6ZN28 852 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 ARHGAP36Q6ZRI8 547 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 RBM43Q6ZSC3 357 aaKnown RBP11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 RD3Q7Z3Z2 195 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 UMODL1-AS1Q8N2C9 162 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 PCDH19Q8TAB3 1148 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 KCNE4Q8WWG9 221 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 PEBP4Q96S96 227 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 AGPAT1Q99943 283 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 SYT11Q9BT88 431 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 CPEB1Q9BZB8 566 aaKnown RBP11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 SLC13A1Q9BZW2 595 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 SLC39A8Q9C0K1 460 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 SUV39H2Q9H5I1 410 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 RETREG1Q9H6L5 497 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 LRRC19Q9H756 370 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 DKK3Q9UBP4 350 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 LIMA1Q9UHB6 759 aaKnown RBP11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 PADI4Q9UM07 663 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 SSUH2Q9Y2M2 353 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 BOD1L1Q8NFC6 3051 aa11.66□□□□□ -0.54
PRPF40B-212ENST00000551111 SDK2Q58EX2 2172 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 A0A1W2PQM1 296 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 TSPAN11A1L157 253 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 ZSCAN5CA6NGD5 496 aaPredicted RBP11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 LGALS16A8MUM7 142 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 NTN3O00634 580 aaPredicted RBP11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 RIOK3O14730 519 aaKnown RBP11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 TEX33O43247 280 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 EFSO43281 561 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 CALB1P05937 261 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 ANXA6P08133 673 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 ATP1A3P13637 1013 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 HGFP14210 728 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 PLA2G2AP14555 144 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 LIG3P49916 1009 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 HK3P52790 923 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 YBEYP58557 167 aaPredicted RBP11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 CCL7P80098 99 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 PPARDQ03181 441 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 UBXN1Q04323 297 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 SRSF6Q13247 344 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms