RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 SSX2IPQ9Y2D8 614 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 ZNF510Q9Y2H8 683 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 PCDHGA4Q9Y5G9 962 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 GMEB1Q9Y692 573 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 SMIM31A0A1B0GVY4 71 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 CFLARO15519 480 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 GRID2O43424 1007 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 ATP6V1G1O75348 118 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 TMCC1O94876 653 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 SLC4A1P02730 911 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 COX4I1P13073 169 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 TFEBP19484 476 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 ACVRL1P37023 503 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 DBN1Q16643 649 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 SNX32Q86XE0 403 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 RTL3Q8N8U3 475 aaKnown RBP14.9□□□□□ -0.02
DDX55-209ENST00000542286 PPHLN1Q8NEY8 458 aaKnown RBP14.9□□□□□ -0.02
DDX55-209ENST00000542286 EXT2Q93063 718 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 PHF21BQ96EK2 531 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 GPR78Q96P69 363 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 PRDM16Q9HAZ2 1276 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 ABT1Q9ULW3 272 aaKnown RBP14.9□□□□□ -0.02
DDX55-209ENST00000542286 ACOT9Q9Y305 439 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 AAR2Q9Y312 384 aaKnown RBP14.9□□□□□ -0.02
DDX55-209ENST00000542286 RAD54BQ9Y620 910 aa14.9□□□□□ -0.02
DDX55-209ENST00000542286 KCNU1A8MYU2 1149 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 FAM155AB1AL88 458 aaPredicted RBP14.89□□□□□ -0.03
DDX55-209ENST00000542286 PEX11BO96011 259 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 CSE1LP55060 971 aaKnown RBP14.89□□□□□ -0.03
DDX55-209ENST00000542286 PKNOX1P55347 436 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 CCNIQ14094 377 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 SFT2D3Q587I9 215 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 MS4A13Q5J8X5 152 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 TMCO4Q5TGY1 634 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 OR6P1Q8NGX9 317 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 GIPC2Q8TF65 315 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 ANKRD49Q8WVL7 239 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 SEPT5Q99719 369 aaPredicted RBP14.89□□□□□ -0.03
DDX55-209ENST00000542286 GPR62Q9BZJ7 368 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 CATSPERBQ9H7T0 1116 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 TBC1D13Q9NVG8 400 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 MARCH4Q9P2E8 410 aaPredicted RBP14.89□□□□□ -0.03
DDX55-209ENST00000542286 CDH22Q9UJ99 828 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 CRYL1Q9Y2S2 319 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 C5orf42Q9H799 3197 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 MAGEB16A2A368 324 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 STMN1P16949 149 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 NUDT2P50583 147 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 MLLT6P55198 1093 aaPredicted RBP14.89□□□□□ -0.03
DDX55-209ENST00000542286 RAB10P61026 200 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 COG7P83436 770 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 TBL3Q12788 808 aaKnown RBP14.89□□□□□ -0.03
DDX55-209ENST00000542286 ASPHQ12797 758 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 DNAL1Q4LDG9 190 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 RANBP10Q6VN20 620 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 PGBD5Q8N414 524 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 FAM156AQ8NDB6 213 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 TSGA13Q96PP4 275 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 CYP2S1Q96SQ9 504 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 ILKAPQ9H0C8 392 aaPredicted RBP14.89□□□□□ -0.03
DDX55-209ENST00000542286 GPAMQ9HCL2 828 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 FBXO5Q9UKT4 447 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 CDY1Q9Y6F8 540 aa14.89□□□□□ -0.03
DDX55-209ENST00000542286 MUSKO15146 869 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 CACNG3O60359 315 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 KLHL2O95198 593 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 PGM3O95394 542 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 CKBP12277 381 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 VCLP18206 1134 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 TBX4P57082 545 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 GRM2Q14416 872 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 PTPRRQ15256 657 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 TRIM71Q2Q1W2 868 aaKnown RBP14.88□□□□□ -0.03
DDX55-209ENST00000542286 VARS2Q5ST30 1063 aaKnown RBP14.88□□□□□ -0.03
DDX55-209ENST00000542286 FAM171A1Q5VUB5 890 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 LIPMQ5VYY2 423 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 NEPROQ6NW34 567 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 GLB1LQ6UWU2 654 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 ZYG11AQ6WRX3 759 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 LINC00523Q86TU6 105 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 TMEM173Q86WV6 379 aaPredicted RBP14.88□□□□□ -0.03
DDX55-209ENST00000542286 DGCR14Q96DF8 476 aaKnown RBP14.88□□□□□ -0.03
DDX55-209ENST00000542286 EXOC2Q96KP1 924 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 CCSER2Q9H7U1 834 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 TMEM165Q9HC07 324 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 ZDHHC7Q9NXF8 308 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 GTSE1Q9NYZ3 720 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 MATN2O00339 956 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 ANXA9O76027 345 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 SLC10A3P09131 477 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 CCDC166P0CW27 439 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 UQCRBP14927 111 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 ALOX15P16050 662 aaPredicted RBP14.88□□□□□ -0.03
DDX55-209ENST00000542286 TCN1P20061 433 aaPredicted RBP14.88□□□□□ -0.03
DDX55-209ENST00000542286 SLC12A1Q13621 1099 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 CCSAPQ6IQ19 270 aaPredicted RBP14.88□□□□□ -0.03
DDX55-209ENST00000542286 FBXL22Q6P050 247 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 ZNF513Q8N8E2 541 aaPredicted RBP14.88□□□□□ -0.03
DDX55-209ENST00000542286 TTC16Q8NEE8 873 aa14.88□□□□□ -0.03
DDX55-209ENST00000542286 SLC45A3Q96JT2 553 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms