RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 MEI4A8MW99 385 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 LATO43561 262 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 STK10O94804 968 aaKnown RBP19.59■□□□□ 0.73
DDX55-207ENST00000540763 ATP1A1P05023 1023 aaKnown RBP19.59■□□□□ 0.73
DDX55-207ENST00000540763 ABL2P42684 1182 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 PTGER3P43115 390 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 GNG11P61952 73 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 TRAF2Q12933 501 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 LPAL2Q16609 132 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 UGP2Q16851 508 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 KIAA1161Q6NSJ0 714 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 DRICH1Q6PGQ1 229 aaPredicted RBP19.59■□□□□ 0.73
DDX55-207ENST00000540763 RABEPKQ7Z6M1 372 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 TTC7BQ86TV6 843 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 RUBCNQ92622 972 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 TADA1Q96BN2 335 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 IMP4Q96G21 291 aaKnown RBP19.59■□□□□ 0.73
DDX55-207ENST00000540763 AGAP3Q96P47 875 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 GLOD4Q9HC38 313 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 KLHL8Q9P2G9 620 aaPredicted RBP19.59■□□□□ 0.73
DDX55-207ENST00000540763 SNX12Q9UMY4 172 aa19.59■□□□□ 0.73
DDX55-207ENST00000540763 R3HDM2Q9Y2K5 976 aaKnown RBP19.59■□□□□ 0.73
DDX55-207ENST00000540763 TP53BP1Q12888 1972 aaPredicted RBP19.59■□□□□ 0.73
DDX55-207ENST00000540763 DOCK9Q9BZ29 2069 aa19.58■□□□□ 0.73
DDX55-207ENST00000540763 TBC1D3DA0A087WVF3 549 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 TBC1D3IA0A087WXS9 549 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 TBC1D3EA0A087X179 549 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 TBC1D3KA0A087X1G2 549 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 TBC1D3FA6NER0 549 aaPredicted RBP19.58■□□□□ 0.72
DDX55-207ENST00000540763 TBC1D3LB9A6J9 549 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 CEP104O60308 925 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 FZD6O60353 706 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 PGLSO95336 258 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 CPP00450 1065 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 FGGP02679 453 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 IGHV4-34P06331 123 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 MMP2P08253 660 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 TBC1D3HP0C7X1 549 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 TIMP2P16035 220 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 TCP1P17987 556 aaKnown RBP19.58■□□□□ 0.72
DDX55-207ENST00000540763 XPAP23025 273 aaPredicted RBP19.58■□□□□ 0.72
DDX55-207ENST00000540763 CXCR5P32302 372 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 RPL26P61254 145 aaKnown RBP19.58■□□□□ 0.72
DDX55-207ENST00000540763 NIPAL4Q0D2K0 466 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 SIX1Q15475 284 aaPredicted RBP19.58■□□□□ 0.72
DDX55-207ENST00000540763 ARMC12Q5T9G4 340 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 TBC1D3GQ6DHY5 549 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 ITPRIPL1Q6GPH6 555 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 TBC1D3CQ6IPX1 549 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 B4GALNT4Q76KP1 1039 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 ZSWIM9Q86XI8 627 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 SYT12Q8IV01 421 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 KIAA2013Q8IYS2 634 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 TBC1D3Q8IZP1 549 aaPredicted RBP19.58■□□□□ 0.72
DDX55-207ENST00000540763 ZNF567Q8N184 647 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 BIRC7Q96CA5 298 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 PPP1R2P1Q96PQ5 205 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 OSBPL9Q96SU4 736 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 NAP1L3Q99457 506 aaPredicted RBP19.58■□□□□ 0.72
DDX55-207ENST00000540763 TDRD1Q9BXT4 1180 aaKnown RBP19.58■□□□□ 0.72
DDX55-207ENST00000540763 CEP41Q9BYV8 373 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 USP29Q9HBJ7 922 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 VPS45Q9NRW7 570 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 HOMER3Q9NSC5 361 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 NCDNQ9UBB6 729 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 SUSD2Q9UGT4 822 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 PILRBQ9UKJ0 227 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 RPL26L1Q9UNX3 145 aaKnown RBP19.58■□□□□ 0.72
DDX55-207ENST00000540763 PCDHGC4Q9Y5F7 938 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 RAI2Q9Y5P3 530 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 PI4KAP42356 2102 aa19.58■□□□□ 0.72
DDX55-207ENST00000540763 GPR179Q6PRD1 2367 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 TTC24A2A3L6 582 aaPredicted RBP19.57■□□□□ 0.72
DDX55-207ENST00000540763 FAM47DPA6NHR8 397 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 KCNN4O15554 427 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 SPINT1O43278 529 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 LIASO43766 372 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 PRLRP16471 622 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 MMP12P39900 470 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 MPLP40238 635 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 RPS21P63220 83 aaKnown RBP19.57■□□□□ 0.72
DDX55-207ENST00000540763 SKOR1P84550 965 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 OASLQ15646 514 aaKnown RBP19.57■□□□□ 0.72
DDX55-207ENST00000540763 CCNG2Q16589 344 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 TMEM259Q4ZIN3 620 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 ERAP2Q6P179 960 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 PID1Q7Z2X4 250 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 HORMAD1Q86X24 394 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 RTP4Q96DX8 246 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 FEM1CQ96JP0 617 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 SPATA13Q96N96 652 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 FCRL5Q96RD9 977 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 FAM118BQ9BPY3 351 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 DNPEPQ9ULA0 475 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 PHTF1Q9UMS5 762 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 DMTF1Q9Y222 760 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 PPIL1Q9Y3C6 166 aa19.57■□□□□ 0.72
DDX55-207ENST00000540763 A0A1W2PPC4 97 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 C5orf60A6NFR6 353 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 RIOK3O14730 519 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms