RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 DNPH1O43598 174 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 STRNO43815 780 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 ZIC3O60481 467 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 IL1AP01583 271 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 PRSS56P0CW18 603 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 TFPIP10646 304 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 HARSP12081 509 aaKnown RBP0.81□□□□□ -2.28
COPB1-212ENST00000534771 CYP4B1P13584 511 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 HLA-DOBP13765 273 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 GNB3P16520 340 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 IBSPP21815 317 aaPredicted RBP0.81□□□□□ -2.28
COPB1-212ENST00000534771 KLRK1P26718 216 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 AKT1P31749 480 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 STT3AP46977 705 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 MMP14P50281 582 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 RPS6KA3P51812 740 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 EPHB1P54762 984 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 HDAC4P56524 1084 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 TNFAIP2Q03169 654 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 PEX6Q13608 980 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 TMEM187Q14656 261 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 EFNB3Q15768 340 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 TBRG1Q3YBR2 411 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 ZFP69Q49AA0 526 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 GXYLT1Q4G148 440 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 KCNT1Q5JUK3 1230 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 TBC1D9BQ66K14 1250 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 TRNP1Q6NT89 227 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 CCNI2Q6ZMN8 369 aaPredicted RBP0.81□□□□□ -2.28
COPB1-212ENST00000534771 C15orf39Q6ZRI6 1047 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 KCTD8Q6ZWB6 473 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 GALNT7Q86SF2 657 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 TMEM219Q86XT9 240 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 ERC1Q8IUD2 1116 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 DENND6AQ8IWF6 608 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 SCN4BQ8IWT1 228 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 FBXL16Q8N461 479 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 SPATA22Q8NHS9 363 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 ARRDC2Q8TBH0 407 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 SLC20A1Q8WUM9 679 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 TAAR8Q969N4 342 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 ARRDC3Q96B67 414 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 OTULINQ96BN8 352 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 RNF183Q96D59 192 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 MOCOSQ96EN8 888 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 IWS1Q96ST2 819 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 YME1L1Q96TA2 773 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 KXD1Q9BQD3 176 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 TRIM51Q9BSJ1 452 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 CABLES2Q9BTV7 478 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 CSTL1Q9H114 145 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 CERS4Q9HA82 394 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 PLEKHA5Q9HAU0 1116 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 PCDH9Q9HC56 1237 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 NOX4Q9NPH5 578 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 NECTIN3Q9NQS3 549 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 TM7SF3Q9NS93 570 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 SLC22A11Q9NSA0 550 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 TMEM30AQ9NV96 361 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 HCFC1R1Q9NWW0 138 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 ANKRD10Q9NXR5 420 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 ZKSCAN7Q9P0L1 754 aaPredicted RBP0.81□□□□□ -2.28
COPB1-212ENST00000534771 KLQ9UEF7 1012 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 FBXO40Q9UH90 709 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 C2CD2Q9Y426 696 aa0.81□□□□□ -2.28
COPB1-212ENST00000534771 GREB1LQ9C091 1923 aaPredicted RBP0.81□□□□□ -2.28
COPB1-212ENST00000534771 IGKV6D-21A0A0A0MT36 114 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 A0A0G2JLW4 131 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 ANO9A1A5B4 782 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 AKR1B15C9JRZ8 316 aaPredicted RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 TCERG1O14776 1098 aaKnown RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 SYN3O14994 580 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 KPNA5O15131 536 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 PLRG1O43660 514 aaKnown RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 SLC25A17O43808 307 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 PQBP1O60828 265 aaKnown RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 WDR1O75083 606 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 NDUFS7O75251 213 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 MTA2O94776 668 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 PDGFRBP09619 1106 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 CBLP22681 906 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 GATA2P23769 480 aaPredicted RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 SHC1P29353 583 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 CDC25CP30307 473 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 TLX1P31314 330 aaPredicted RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 GNL1P36915 607 aaPredicted RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 PIGAP37287 484 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 DCTP40126 519 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 USP8P40818 1118 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 TMPOP42166 694 aaKnown RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 CASP5P51878 434 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 EEF1A1P68104 462 aaKnown RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 RUNX1T1Q06455 604 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 GAGE5Q13069 117 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 GAGE6Q13070 117 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 RAB30Q15771 203 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 SNAI3Q3KNW1 292 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 PAPPA-AS1Q5QFB9 102 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 GPATCH4Q5T3I0 446 aaKnown RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 EEF1A1P5Q5VTE0 462 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms