RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 TP53INP2Q8IXH6 220 aa9.55□□□□□ -0.88
VPS26B-207ENST00000532160 STK40Q8N2I9 435 aa9.55□□□□□ -0.88
VPS26B-207ENST00000532160 ZNF557Q8N988 423 aaPredicted RBP9.55□□□□□ -0.88
VPS26B-207ENST00000532160 KDM1BQ8NB78 822 aa9.55□□□□□ -0.88
VPS26B-207ENST00000532160 OR7D4Q8NG98 312 aa9.55□□□□□ -0.88
VPS26B-207ENST00000532160 OR2T34Q8NGX1 318 aa9.55□□□□□ -0.88
VPS26B-207ENST00000532160 PCDH19Q8TAB3 1148 aa9.55□□□□□ -0.88
VPS26B-207ENST00000532160 SAP25Q8TEE9 199 aa9.55□□□□□ -0.88
VPS26B-207ENST00000532160 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.55□□□□□ -0.883e-9■■■■■ 80.2
VPS26B-207ENST00000532160 CELF6Q96J87 481 aaKnown RBP9.55□□□□□ -0.88
VPS26B-207ENST00000532160 RPL10LQ96L21 214 aaKnown RBP9.55□□□□□ -0.88
VPS26B-207ENST00000532160 ELF4Q99607 663 aaPredicted RBP9.55□□□□□ -0.88
VPS26B-207ENST00000532160 OMDQ99983 421 aa9.55□□□□□ -0.88
VPS26B-207ENST00000532160 HERPUD2Q9BSE4 406 aa9.55□□□□□ -0.88
VPS26B-207ENST00000532160 AASDHPPTQ9NRN7 309 aa9.55□□□□□ -0.88
VPS26B-207ENST00000532160 DDX56Q9NY93 547 aaKnown RBP9.55□□□□□ -0.88
VPS26B-207ENST00000532160 PPARGC1AQ9UBK2 798 aaKnown RBP9.55□□□□□ -0.88
VPS26B-207ENST00000532160 ZNF212Q9UDV6 495 aa9.55□□□□□ -0.88
VPS26B-207ENST00000532160 PCDHA3Q9Y5H8 950 aa9.55□□□□□ -0.88
VPS26B-207ENST00000532160 TDRD6O60522 2096 aaKnown RBP9.54□□□□□ -0.88
VPS26B-207ENST00000532160 A0A087WV48 116 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 A0A0D9SEW6 157 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 DFNA5O60443 496 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 CLDN11O75508 207 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 ATP1A1P05023 1023 aaKnown RBP9.54□□□□□ -0.88
VPS26B-207ENST00000532160 ITGAVP06756 1048 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 RHOCP08134 193 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 SRPRAP08240 638 aaKnown RBP9.54□□□□□ -0.88
VPS26B-207ENST00000532160 PYGMP11217 842 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 RHOQP17081 205 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 CD38P28907 300 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 OR1E1P30953 314 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 CXCR5P32302 372 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 DRD3P35462 400 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 ACVRL1P37023 503 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 PAFAH1B1P43034 410 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 CCR5P51681 352 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 RWDD2BP57060 319 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 DYNLT1P63172 113 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 ADCY2Q08462 1091 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 PDK2Q15119 407 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 RPS6KA1Q15418 735 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 INAVAQ3KP66 663 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 ANKRD20A8PQ5CZ79 823 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 FAM182AQ5T1J6 154 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 RNF219Q5W0B1 726 aaPredicted RBP9.54□□□□□ -0.88
VPS26B-207ENST00000532160 CXorf57Q6NSI4 855 aaKnown RBP9.54□□□□□ -0.88
VPS26B-207ENST00000532160 SPOCD1Q6ZMY3 1216 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 ZNF572Q7Z3I7 529 aaPredicted RBP9.54□□□□□ -0.88
VPS26B-207ENST00000532160 RFX6Q8HWS3 928 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 CCDC117Q8IWD4 279 aaPredicted RBP9.54□□□□□ -0.88
VPS26B-207ENST00000532160 KATNAL2Q8IYT4 538 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 NPWQ8N729 165 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 PQLC3Q8N755 202 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 RTL3Q8N8U3 475 aaKnown RBP9.54□□□□□ -0.88
VPS26B-207ENST00000532160 OR14C36Q8NHC7 312 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 FAM71BQ8TC56 605 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 LRRN4Q8WUT4 740 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 PTPRN2Q92932 1015 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 HES6Q96HZ4 224 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 SERAC1Q96JX3 654 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 CNDP2Q96KP4 475 aaKnown RBP9.54□□□□□ -0.88
VPS26B-207ENST00000532160 HEMGNQ9BXL5 484 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 TLR10Q9BXR5 811 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 FUT8Q9BYC5 575 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 TMEM248Q9NWD8 314 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 ZNF446Q9NWS9 450 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 FZD4Q9ULV1 537 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS26B-207ENST00000532160 MGAQ8IWI9 3026 aa9.54□□□□□ -0.88
VPS26B-207ENST00000532160 hCG_1818297A0A087WSY0 165 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 MIF4GDA9UHW6 222 aaKnown RBP9.53□□□□□ -0.88
VPS26B-207ENST00000532160 CES2O00748 559 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 FANCGO15287 622 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 LDOC1O95751 146 aaPredicted RBP9.53□□□□□ -0.88
VPS26B-207ENST00000532160 ADH1BP00325 375 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 IL1BP01584 269 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 C5AR1P21730 350 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 GLDCP23378 1020 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 EPHA8P29322 1005 aaPredicted RBP9.53□□□□□ -0.88
VPS26B-207ENST00000532160 CDKN2BP42772 138 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 ACADVLP49748 655 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 NXPH1P58417 271 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 BNIP3Q12983 259 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 BEND6Q5SZJ8 279 aaPredicted RBP9.53□□□□□ -0.88
VPS26B-207ENST00000532160 ACBD5Q5T8D3 534 aaPredicted RBP9.53□□□□□ -0.88
VPS26B-207ENST00000532160 TTC39BQ5VTQ0 682 aaPredicted RBP9.53□□□□□ -0.88
VPS26B-207ENST00000532160 NCBP2-AS2Q69YL0 99 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 NPNTQ6UXI9 565 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 LEKR1Q6ZMV7 388 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 B4GALNT4Q76KP1 1039 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 TMPRSS12Q86WS5 348 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 ZNF354CQ86Y25 554 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 MAP7D3Q8IWC1 876 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 RCOR2Q8IZ40 523 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 EID2Q8N6I1 236 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 UBL4BQ8N7F7 174 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 EXD1Q8NHP7 514 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 FRS2Q8WU20 508 aa9.53□□□□□ -0.88
VPS26B-207ENST00000532160 HAUS1Q96CS2 278 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms