RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ZNF37AP17032 561 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 PTPN2P17706 415 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 IL32P24001 234 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 ADRA1DP25100 572 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 SLC5A2P31639 672 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 SKIV2L2P42285 1042 aaKnown RBP4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 TRAPPC10P48553 1259 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 CENPAP49450 140 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 PRIM2P49643 509 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 GPC3P51654 580 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZNF75DP51815 510 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 EIF4A1P60842 406 aaKnown RBP4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 B2MP61769 119 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 UBE2HP62256 183 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 CYP4A11Q02928 519 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 UBXN1Q04323 297 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 IMMTQ16891 758 aaKnown RBP4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 C1orf141Q5JVX7 400 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 CYP4A22Q5TCH4 519 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 TBC1D9BQ66K14 1250 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZNF772Q68DY9 489 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 PDXDC1Q6P996 788 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 SLC2A7Q6PXP3 512 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 SARM1Q6SZW1 724 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 TOM1L2Q6ZVM7 507 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 INTS8Q75QN2 995 aaKnown RBP4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 KCTD20Q7Z5Y7 419 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 GLCCI1Q86VQ1 547 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 PLA2G4DQ86XP0 818 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 CCDC83Q8IWF9 413 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 LRRC8AQ8IWT6 810 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 SPICE1Q8N0Z3 855 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 TEX19Q8NA77 164 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 CCDC148Q8NFR7 591 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 CYP2W1Q8TAV3 490 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 SPATA18Q8TC71 538 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 HAUS1Q96CS2 278 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 CDCA5Q96FF9 252 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 LRRC46Q96FV0 321 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 ANKRD36BP1Q96IX9 119 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 C1orf74Q96LT6 269 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 CCDC138Q96M89 665 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 OLFM3Q96PB7 478 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 ASB2Q96Q27 587 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 TBCBQ99426 244 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 TSG101Q99816 390 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 RIOK1Q9BRS2 568 aaKnown RBP4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 THAP7Q9BT49 309 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 CENPOQ9BU64 300 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 AGXT2Q9BYV1 514 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 API5Q9BZZ5 524 aaKnown RBP4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 KLHL4Q9C0H6 718 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 NDEL1Q9GZM8 345 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZNF700Q9H0M5 742 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 PTPRHQ9HD43 1115 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 NRIP3Q9NQ35 241 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 CRNNQ9UBG3 495 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 FBXO2Q9UK22 296 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 FBXL5Q9UKA1 691 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 RAB21Q9UL25 225 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZMYND8Q9ULU4 1186 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 CNPY2Q9Y2B0 182 aa4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 FAM32AQ9Y421 112 aaKnown RBP4.81□□□□□ -1.64
HMGB3P13-201ENST00000511263 CDHR2Q9BYE9 1310 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 ANKRD65E5RJM6 399 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 SMIM22K7EJ46 135 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 NVLO15381 856 aaKnown RBP4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 KCNJ13O60928 360 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 TSPAN9O75954 239 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 TOMM70O94826 608 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 ATP6V1G2O95670 118 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 HOXB7P09629 217 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 MYZAPP0CAP1 466 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 KRT13P13646 458 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 HGFP14210 728 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 NFKBIAP25963 317 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 HMOX2P30519 316 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 THOP1P52888 689 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 CYP4F2P78329 520 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 NIPAL4Q0D2K0 466 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 GPS1Q13098 491 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 DNAJC3Q13217 504 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 PSMD6Q15008 389 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 CYP1B1Q16678 543 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 MTHFSDQ2M296 383 aaKnown RBP4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 ANKDD1AQ495B1 522 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 COLEC12Q5KU26 742 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 WDR45BQ5MNZ6 344 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 TMTC4Q5T4D3 741 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 MANEALQ5VSG8 457 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 IL23RQ5VWK5 629 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 ARL6IP4Q66PJ3 421 aaKnown RBP4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 ZNF449Q6P9G9 518 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 CORO6Q6QEF8 472 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 KIRREL2Q6UWL6 708 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 CLEC9AQ6UXN8 241 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 RSRC2Q7L4I2 434 aaKnown RBP4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 CACNA2D4Q7Z3S7 1137 aa4.8□□□□□ -1.64
HMGB3P13-201ENST00000511263 PPP1R42Q7Z4L9 355 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms