RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 CCT8P50990 548 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 CLCN3P51790 818 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 SLC7A2P52569 658 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 SCAPQ12770 1279 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 SEMA3BQ13214 749 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 BTG3Q14201 252 aaPredicted RBP17.89■□□□□ 0.45
NUP54-205ENST00000507257 AARS2Q5JTZ9 985 aaKnown RBP17.89■□□□□ 0.45
NUP54-205ENST00000507257 TBCELQ5QJ74 424 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 ANKRD26P1Q6NSI1 321 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 NANOGP8Q6NSW7 305 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 FAM117BQ6P1L5 589 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 SLC41A1Q8IVJ1 513 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.89■□□□□ 0.45
NUP54-205ENST00000507257 TRMOQ9BU70 441 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 POMKQ9H5K3 350 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 CCDC167Q9P0B6 97 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 ACTR3BQ9P1U1 418 aa17.89■□□□□ 0.45
NUP54-205ENST00000507257 FAM95CA0A1B0GW59 222 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 A0A1W2PPW3 197 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 SOWAHBA6NEL2 793 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 CACNG3O60359 315 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 GPIP06744 558 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 F7P08709 466 aaPredicted RBP17.88■□□□□ 0.45
NUP54-205ENST00000507257 LCP1P13796 627 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 ARF4P18085 180 aaPredicted RBP17.88■□□□□ 0.45
NUP54-205ENST00000507257 UGT1A6P19224 532 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 UGT1A1P22309 533 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 UGT1A4P22310 534 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 UGT1A3P35503 534 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 UGT1A5P35504 534 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 HLCSP50747 726 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 TUBA3CQ13748 450 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 CELF3Q5SZQ8 465 aaKnown RBP17.88■□□□□ 0.45
NUP54-205ENST00000507257 USP51Q70EK9 711 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 SIX6OS1Q8N1H7 587 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 MINDY1Q8N5J2 469 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 PTCD2Q8WV60 388 aaKnown RBP17.88■□□□□ 0.45
NUP54-205ENST00000507257 MYRFLQ96LU7 910 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 NEURL2Q9BR09 285 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 SMARCAD1Q9H4L7 1026 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 PLEKHA5Q9HAU0 1116 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 TRPC5Q9UL62 973 aaPredicted RBP17.88■□□□□ 0.45
NUP54-205ENST00000507257 TCAF1Q9Y4C2 921 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 NOL3O60936 208 aaKnown RBP17.88■□□□□ 0.45
NUP54-205ENST00000507257 C22orf31O95567 290 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 FUCA1P04066 466 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 PSMA4P25789 261 aaKnown RBP17.88■□□□□ 0.45
NUP54-205ENST00000507257 GRM5P41594 1212 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 ZNF135P52742 658 aaPredicted RBP17.88■□□□□ 0.45
NUP54-205ENST00000507257 PCID2Q5JVF3 399 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 GPR107Q5VW38 600 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 PKN3Q6P5Z2 889 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 ACDQ96AP0 544 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 KIF12Q96FN5 646 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 ZNF668Q96K58 619 aaPredicted RBP17.88■□□□□ 0.45
NUP54-205ENST00000507257 C1orf50Q9BV19 199 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 POLR1BQ9H9Y6 1135 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 SEPT3Q9UH03 358 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 STAP1Q9ULZ2 295 aa17.88■□□□□ 0.45
NUP54-205ENST00000507257 TTC24A2A3L6 582 aaPredicted RBP17.87■□□□□ 0.45
NUP54-205ENST00000507257 SAC3D1A6NKF1 404 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 ACOX3O15254 700 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 CLOCKO15516 846 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 ERCC2P18074 760 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 CAPGP40121 348 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 BMXP51813 675 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 ZNF280AP59817 542 aaPredicted RBP17.87■□□□□ 0.45
NUP54-205ENST00000507257 C1QTNF8P60827 252 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 POU4F1Q01851 419 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 ZNF33AQ06730 810 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 FOXM1Q08050 763 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 NFATC3Q12968 1075 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 PRPSAP1Q14558 356 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 LY6KQ17RY6 165 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 TECRLQ5HYJ1 363 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 COQ5Q5HYK3 327 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 FGD3Q5JSP0 725 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 LARP4Q71RC2 724 aaKnown RBP eCLIP17.87■□□□□ 0.45
NUP54-205ENST00000507257 CEP97Q8IW35 865 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 NIM1KQ8IY84 436 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 LINC01465Q8N7H1 131 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 LEMD2Q8NC56 503 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 OR13F1Q8NGS4 319 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 DPF3Q92784 378 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 TANKQ92844 425 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 ABHD8Q96I13 439 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 TEKT5Q96M29 485 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 CYP2S1Q96SQ9 504 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 TBC1D13Q9NVG8 400 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 SELENONQ9NZV5 590 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 ERGIC3Q9Y282 383 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 NDUFAF1Q9Y375 327 aa17.87■□□□□ 0.45
NUP54-205ENST00000507257 CCDC162PA2VCL2 907 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 K7EPI3 171 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 TFPTP0C1Z6 253 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 NFKB1P19838 968 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 CDH3P22223 829 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 AVPR1AP37288 418 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 HALP42357 657 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 CCR3P51677 355 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms