RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 ELP4Q96EB1 424 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 IGSF21Q96ID5 467 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 CSF3RQ99062 836 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 TXLNGQ9NUQ3 528 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 ALKBH4Q9NXW9 302 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 SLC9A2Q9UBY0 812 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 KCNG2Q9UJ96 466 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 HSF4Q9ULV5 492 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 PCDHGB5Q9Y5G0 923 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 A0A0U1RQF3 1178 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 ARHGAP10A1A4S6 786 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 HSPA12AO43301 675 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 GRID2O43424 1007 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 LDB3O75112 727 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 KDM4BO94953 1096 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 ITGAXP20702 1163 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 CCR5P51681 352 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 EFNA5P52803 228 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 DLX5P56178 289 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 HDAC4P56524 1084 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 CHRNDQ07001 517 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 ARHGEF6Q15052 776 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 EFNB3Q15768 340 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 ZNF672Q499Z4 452 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 DCAF6Q58WW2 860 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 PAPPA-AS1Q5QFB9 102 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 USP43Q70EL4 1123 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 SHFQ7M4L6 423 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 ADGRG6Q86SQ4 1221 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 TBC1D26Q86UD7 250 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 NOXA1Q86UR1 476 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 FAM160B2Q86V87 743 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 PLD5Q8N7P1 536 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 LBHD1Q9BQE6 289 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 TAOK3Q9H2K8 898 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 SNTG1Q9NSN8 517 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 MDFICQ9P1T7 246 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 PEMTQ9UBM1 199 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 A3GALT2U3KPV4 340 aa3.49□□□□□ -1.85
HMGB1P29-201ENST00000505659 SAA2-SAA4A0A096LPE2 208 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 BUB3O43684 328 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 KLK8O60259 260 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 ZIC3O60481 467 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 IGKV3-20P01619 116 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 IGHV4-30-4P0DP06 118 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 SLC2A4P14672 509 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 BLKP51451 505 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 ILF3Q12906 894 aaKnown RBP eCLIP3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 WDR45BQ5MNZ6 344 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 C9orf50Q5SZB4 431 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 MAP3K21Q5TCX8 1036 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 ATG16L1Q676U5 607 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 ZNF771Q7L3S4 317 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 GPAT4Q86UL3 456 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 KIAA2013Q8IYS2 634 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 USP38Q8NB14 1042 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 SH3KBP1Q96B97 665 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 ZC3HAV1LQ96H79 300 aaKnown RBP3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 IL17FQ96PD4 163 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 DUX5Q96PT3 197 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 CD180Q99467 661 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 ISCA1Q9BUE6 129 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 HEMGNQ9BXL5 484 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 RIC8AQ9NPQ8 531 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 DDX4Q9NQI0 724 aaKnown RBP3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 DONSONQ9NYP3 566 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 CISD1Q9NZ45 108 aaKnown RBP3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 PAM16Q9Y3D7 125 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 SNX9Q9Y5X1 595 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 NFS1Q9Y697 457 aa3.48□□□□□ -1.85
HMGB1P29-201ENST00000505659 CPED1A4D0V7 1026 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 PRAC2D3DTV9 90 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 TULP2O00295 520 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 EIF3FO00303 357 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 CLDN14O95500 239 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 DAOP14920 347 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 ZNF8P17098 575 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 POU5F1BQ06416 359 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 TBL3Q12788 808 aaKnown RBP3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 GRIK3Q13003 919 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 EFR3AQ14156 821 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 KRTAP24-1Q3LI83 254 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 MMEL1Q495T6 779 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 HIST2H2BCQ6DN03 193 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 HIST2H2BDQ6DRA6 164 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 WBP2NLQ6ICG8 309 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 SLC22A25Q6T423 547 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 KLHL24Q6TFL4 600 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 BBS12Q6ZW61 710 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 ZC3HC1Q86WB0 502 aaKnown RBP3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 ANKRD42Q8N9B4 389 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 NEK9Q8TD19 979 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 CREB3L4Q8TEY5 395 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 HERVK_113Q902F9 699 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 BICD1Q96G01 975 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 ZSCAN31Q96LW9 406 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 LRFN5Q96NI6 719 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 VPS33BQ9H267 617 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 LRRC4Q9HBW1 653 aa3.47□□□□□ -1.85
HMGB1P29-201ENST00000505659 CDC14AQ9UNH5 594 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms