RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 LAYNQ6UX15 382 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 BZW1Q7L1Q6 419 aaKnown RBP13.71□□□□□ -0.21
FDPS-219ENST00000495308 TRIM69Q86WT6 500 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 REXO1L1PQ8IX06 675 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 CNTD1Q8N815 330 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 C12orf50Q8NA57 414 aaPredicted RBP13.71□□□□□ -0.21
FDPS-219ENST00000495308 C1orf216Q8TAB5 229 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 PDCD6IPQ8WUM4 868 aaKnown RBP13.71□□□□□ -0.21
FDPS-219ENST00000495308 TFB1MQ8WVM0 346 aaKnown RBP13.71□□□□□ -0.21
FDPS-219ENST00000495308 SLC6A18Q96N87 628 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 MYOCQ99972 504 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 C10orf88Q9H8K7 445 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 TM9SF3Q9HD45 589 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 TRMT1Q9NXH9 659 aaKnown RBP13.71□□□□□ -0.21
FDPS-219ENST00000495308 EFR3BQ9Y2G0 817 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 ATP8A1Q9Y2Q0 1164 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 PTPRZ1P23471 2315 aaPredicted RBP13.71□□□□□ -0.21
FDPS-219ENST00000495308 SPTBN4Q9H254 2564 aa13.71□□□□□ -0.22
FDPS-219ENST00000495308 A0A1B0GTW7 788 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 A0A1W2PPC4 97 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 TCRBV7S2A1N4TA0A589 114 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 UPK3BL1B0FP48 263 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 UPK3BL2E5RIL1 263 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 NEMP1O14524 444 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 TRAFD1O14545 582 aaPredicted RBP13.7□□□□□ -0.22
FDPS-219ENST00000495308 WNT9AO14904 365 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 AREL1O15033 823 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 KHNYNO15037 678 aaKnown RBP13.7□□□□□ -0.22
FDPS-219ENST00000495308 BCAT2O15382 392 aaPredicted RBP13.7□□□□□ -0.22
FDPS-219ENST00000495308 LATO43561 262 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 AP1G1O43747 822 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 GDF9O60383 454 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 TJP3O95049 919 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 GNSP15586 552 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 PRLRP16471 622 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 XPAP23025 273 aaPredicted RBP13.7□□□□□ -0.22
FDPS-219ENST00000495308 HOXD12P35452 270 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 DPP6P42658 865 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 MAPK8P45983 427 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 IRX4P78413 519 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 NIPAL4Q0D2K0 466 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 RPS6KA1Q15418 735 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 UGP2Q16851 508 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 DUOXA1Q1HG43 343 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 ZNF284Q2VY69 593 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 AASDHQ4L235 1098 aaPredicted RBP13.7□□□□□ -0.22
FDPS-219ENST00000495308 ALG1LQ6GMV1 187 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 BRAT1Q6PJG6 821 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 HORMAD1Q86X24 394 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 TRIM58Q8NG06 486 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 CEP76Q8TAP6 659 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 ARRDC2Q8TBH0 407 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 ACTL9Q8TC94 416 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 RAB7BQ96AH8 199 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 ECHDC3Q96DC8 303 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 AGAP3Q96P47 875 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 QKIQ96PU8 341 aaKnown RBP eCLIP13.7□□□□□ -0.22
FDPS-219ENST00000495308 WRAP53Q9BUR4 548 aaKnown RBP13.7□□□□□ -0.22
FDPS-219ENST00000495308 BRD8Q9H0E9 1235 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 FZD3Q9NPG1 666 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 PCDH12Q9NPG4 1184 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 SUSD2Q9UGT4 822 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 AMACRQ9UHK6 382 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 PYCARDQ9ULZ3 195 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 RAI2Q9Y5P3 530 aa13.7□□□□□ -0.22
FDPS-219ENST00000495308 CEP250Q9BV73 2442 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 LNP1A1A4G5 178 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 USP27XA6NNY8 438 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 H7C0C1 242 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 KCNK3O14649 394 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 SLC31A1O15431 190 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 ZSCAN12O43309 604 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 HTRA2O43464 458 aaPredicted RBP13.69□□□□□ -0.22
FDPS-219ENST00000495308 SOCS5O75159 536 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 CPP00450 1065 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 MMP2P08253 660 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 SERPINF2P08697 491 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 PTPN3P26045 913 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 RBL1P28749 1068 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 CD86P42081 329 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 ATP5OP48047 213 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 CSNK1EP49674 416 aaKnown RBP13.69□□□□□ -0.22
FDPS-219ENST00000495308 EIF3EP60228 445 aaKnown RBP13.69□□□□□ -0.22
FDPS-219ENST00000495308 TMEM259Q4ZIN3 620 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 SLC45A4Q5BKX6 768 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 SEL1L2Q5TEA6 688 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 SLC23A3Q6PIS1 610 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 PRPF39Q86UA1 669 aaKnown RBP13.69□□□□□ -0.22
FDPS-219ENST00000495308 HCAR2Q8TDS4 363 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 SERAC1Q96JX3 654 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 TLR10Q9BXR5 811 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 NUSAP1Q9BXS6 441 aaKnown RBP13.69□□□□□ -0.22
FDPS-219ENST00000495308 CAPN10Q9HC96 672 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 HAUS2Q9NVX0 235 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 SLC6A14Q9UN76 642 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 CA5BQ9Y2D0 317 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 R3HDM2Q9Y2K5 976 aaKnown RBP13.69□□□□□ -0.22
FDPS-219ENST00000495308 PCDHB9Q9Y5E1 797 aa13.69□□□□□ -0.22
FDPS-219ENST00000495308 A0A1B0GVT2 93 aa13.68□□□□□ -0.22
FDPS-219ENST00000495308 IGLON5A6NGN9 336 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms