RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 KRT75O95678 551 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 HSPA1AP0DMV8 641 aaKnown RBP11.39□□□□□ -0.59
SMPD4-218ENST00000482171 HSPA1BP0DMV9 641 aaKnown RBP11.39□□□□□ -0.59
SMPD4-218ENST00000482171 ZNF23P17027 643 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 VCLP18206 1134 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 GATMP50440 423 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 DSC2Q02487 901 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 TLE2Q04725 743 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 BCL2L1Q07817 233 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 INCA1Q0VD86 236 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 BOP1Q14137 746 aaKnown RBP11.39□□□□□ -0.59
SMPD4-218ENST00000482171 AUTS2Q8WXX7 1259 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 POMKQ9H5K3 350 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 CACYBPQ9HB71 228 aaKnown RBP11.39□□□□□ -0.59
SMPD4-218ENST00000482171 CRTAC1Q9NQ79 661 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 AP4B1Q9Y6B7 739 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 URB1O60287 2271 aaKnown RBP11.39□□□□□ -0.59
SMPD4-218ENST00000482171 C16orf96A6NNT2 1141 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 BTN3A1O00481 513 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 KPNA3O00505 521 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-218ENST00000482171 BEST1O76090 585 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 ZNF865P0CJ78 1059 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-218ENST00000482171 SERPINB1P30740 379 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 CTNNB1P35222 781 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 CHRNA4P43681 627 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 C21orf59P57076 290 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 DPYSL2Q16555 572 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 CNPY1Q3B7I2 92 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 CCDC153Q494R4 210 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 AARS2Q5JTZ9 985 aaKnown RBP11.39□□□□□ -0.59
SMPD4-218ENST00000482171 SCARA3Q6AZY7 606 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 RHBDF2Q6PJF5 856 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 KYAT3Q6YP21 454 aaKnown RBP11.39□□□□□ -0.59
SMPD4-218ENST00000482171 TRIM74Q86UV6 250 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 TRIM73Q86UV7 250 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 MPP5Q8N3R9 675 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 SLAIN1Q8ND83 568 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 TSPAN14Q8NG11 270 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 FOPNLQ96NB1 174 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 SMOQ99835 787 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 ADAMTS10Q9H324 1103 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 TAS2R13Q9NYV9 303 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 TM7SF2O76062 418 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 KRT8P05787 483 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 KCNE1P15382 129 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 PTPN3P26045 913 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 SERPINB10P48595 397 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 GTF2H3Q13889 308 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 TTLL9Q3SXZ7 439 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 HPS6Q86YV9 775 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 PCDH20Q8N6Y1 951 aaKnown RBP11.39□□□□□ -0.59
SMPD4-218ENST00000482171 TUBGCP5Q96RT8 1024 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 ACE2Q9BYF1 805 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-218ENST00000482171 EBF3Q9H4W6 596 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 PIF1Q9H611 641 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 RABGEF1Q9UJ41 708 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 FBXW11Q9UKB1 542 aa11.39□□□□□ -0.59
SMPD4-218ENST00000482171 MOXD2PA6NHM9 499 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 C2P06681 752 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 ARHGDIAP52565 204 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 ZNF132P52740 706 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 POU5F1Q01860 360 aaKnown RBP11.38□□□□□ -0.59
SMPD4-218ENST00000482171 MSS51Q4VC12 460 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 PABPC1LQ4VXU2 614 aaKnown RBP11.38□□□□□ -0.59
SMPD4-218ENST00000482171 ARMC12Q5T9G4 340 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 SATL1Q86VE3 508 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 ZNF280BQ86YH2 543 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 KLHL23Q8NBE8 558 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 NAT14Q8WUY8 206 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 DACH2Q96NX9 599 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 TMEM209Q96SK2 561 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 MID1IP1Q9NPA3 183 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 MIOSQ9NXC5 875 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 XPR1Q9UBH6 696 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 TMCO1Q9UM00 188 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 NRAPQ86VF7 1730 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 ATP6V1G1O75348 118 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 TCEA3O75764 348 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 CXCL14O95715 111 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 PPP3CCP48454 512 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 CDK18Q07002 472 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 PFKFB4Q16877 469 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 DRICH1Q6PGQ1 229 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-218ENST00000482171 CCDC81Q6ZN84 652 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 AGMOQ6ZNB7 445 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 NUDT18Q6ZVK8 323 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 C10orf107Q8IVU9 208 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 MYO1HQ8N1T3 1032 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 FIBCD1Q8N539 461 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 BTN2A3PQ96KV6 586 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 RCOR3Q9P2K3 495 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-218ENST00000482171 PGAP2Q9UHJ9 254 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 AK5Q9Y6K8 562 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 ATP6AP2A0A1C7CYW4 349 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 TTC24A2A3L6 582 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-218ENST00000482171 SH3BGRLO75368 114 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 ATP6AP2O75787 350 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 APOA1P02647 267 aa11.38□□□□□ -0.59
SMPD4-218ENST00000482171 PSMA4P25789 261 aaKnown RBP11.38□□□□□ -0.59
SMPD4-218ENST00000482171 PEX2P28328 305 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms