RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, human

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRAT1-205	ENST00000473879	RMDN1	Q96DB5	314 aa		13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	ERLEC1	Q96DZ1	483 aa		13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	CINP	Q9BW66	212 aa	Predicted RBP	13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	MKRN2	Q9H000	416 aa	Known RBP	13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	SLC6A17	Q9H1V8	727 aa		13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	FBRS	Q9HAH7	460 aa		13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	ITM2C	Q9NQX7	267 aa		13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	EIF2B3	Q9NR50	452 aa	Known RBP	13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	ZDHHC18	Q9NUE0	388 aa		13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	DLL3	Q9NYJ7	618 aa		13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	USP36	Q9P275	1121 aa	Known RBP	13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	SEPT3	Q9UH03	358 aa		13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	SUN2	Q9UH99	717 aa		13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	TTLL3	Q9Y4R7	772 aa		13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	THADA	Q6YHU6	1953 aa		13.43	□□□□□ -0.26
BRAT1-205	ENST00000473879	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	ERI2	A8K979	691 aa	Known RBP	13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	PSMD3	O43242	534 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	METTL18	O95568	372 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	HLA-DQB2	P05538	268 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	SRPRA	P08240	638 aa	Known RBP	13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	MYBL2	P10244	700 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	HLA-E	P13747	358 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	H2AFX	P16104	143 aa	Predicted RBP	13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	NFKB1	P19838	968 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	PSMB4	P28070	264 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	ECHS1	P30084	290 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	DPP6	P42658	865 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	MAGEA6	P43360	314 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	DHPS	P49366	369 aa	Predicted RBP	13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	ST8SIA6	P61647	398 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	SARNP	P82979	210 aa	Known RBP	13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	CDK16	Q00536	496 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	SULT2A1	Q06520	285 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	SLC20A2	Q08357	652 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	SLC10A7	Q0GE19	358 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	KCNJ11	Q14654	390 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	TRADD	Q15628	312 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	CCDC6	Q16204	474 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	INO80D	Q53TQ3	878 aa	Predicted RBP	13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	GSPT2	Q8IYD1	628 aa	Known RBP	13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	TMEFF1	Q8IYR6	380 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	APCDD1	Q8J025	514 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	TAB3	Q8N5C8	712 aa	Predicted RBP	13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	NAT8L	Q8N9F0	302 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	PRCC	Q92733	491 aa	Predicted RBP	13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	SIPA1	Q96FS4	1042 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	POLR1E	Q9GZS1	481 aa	Known RBP	13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	ETNK1	Q9HBU6	452 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	GLOD4	Q9HC38	313 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	NT5M	Q9NPB1	228 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	VPS51	Q9UID3	782 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	SLC25A13	Q9UJS0	675 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	CYP8B1	Q9UNU6	501 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	ERVW-1	Q9UQF0	538 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	ATP8A1	Q9Y2Q0	1164 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	AAR2	Q9Y312	384 aa	Known RBP	13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	CEP192	Q8TEP8	1941 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	LAMA1	P25391	3075 aa		13.42	□□□□□ -0.26
BRAT1-205	ENST00000473879	SNAP91	O60641	907 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	ZMPSTE24	O75844	475 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	ANXA9	O76027	345 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	IGLV3-19	P01714	112 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	APRT	P07741	180 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	GLDC	P23378	1020 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	CD68	P34810	354 aa	Predicted RBP	13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	GEM	P55040	296 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	ARF5	P84085	180 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	ECT2L	Q008S8	904 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	RPL6	Q02878	288 aa	Known RBP	13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	ITK	Q08881	620 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	SF3A2	Q15428	464 aa	Known RBP	13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	FAXC	Q5TGI0	409 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	CYP2U1	Q7Z449	544 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	ZCCHC9	Q8N567	271 aa	Known RBP	13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	CNTD1	Q8N815	330 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	ZNF366	Q8N895	744 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	NETO1	Q8TDF5	533 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	AEN	Q8WTP8	325 aa	Known RBP	13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	ANKRD7	Q92527	254 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	CAVIN3	Q969G5	261 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	VOPP1	Q96AW1	172 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	FCRL5	Q96RD9	977 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	PHACTR1	Q9C0D0	580 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	SLC25A51	Q9H1U9	297 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	NEUROG2	Q9H2A3	272 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	ARFGAP3	Q9NP61	516 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	PRSS16	Q9NQE7	514 aa		13.41	□□□□□ -0.26
BRAT1-205	ENST00000473879	CACNA1A	O00555	2505 aa		13.4	□□□□□ -0.26
BRAT1-205	ENST00000473879	C10orf142	B7Z368	130 aa		13.4	□□□□□ -0.26
BRAT1-205	ENST00000473879	PPFIA2	O75334	1257 aa		13.4	□□□□□ -0.26
BRAT1-205	ENST00000473879	TMCC1	O94876	653 aa		13.4	□□□□□ -0.26
BRAT1-205	ENST00000473879	ACADM	P11310	421 aa		13.4	□□□□□ -0.26
BRAT1-205	ENST00000473879	CES1	P23141	567 aa		13.4	□□□□□ -0.26
BRAT1-205	ENST00000473879	CD6	P30203	668 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 138 ms