RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 TNFP01375 233 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 IGFBP2P18065 325 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 TSFMP43897 325 aaKnown RBP6.65□□□□□ -1.34
HDAC3-206ENST00000471968 GPR3P46089 330 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 TDGF1P3P51864 188 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 RPS24P62847 133 aaKnown RBP6.65□□□□□ -1.34
HDAC3-206ENST00000471968 ZNF174Q15697 407 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 DLG2Q15700 870 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 FAM26FQ5R3K3 315 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 ANKRD40Q6AI12 368 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 SLFN12LQ6IEE8 588 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 FAM199XQ6PEV8 388 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-206ENST00000471968 CCDC186Q7Z3E2 898 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 TECPR1Q7Z6L1 1165 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 SKAP1Q86WV1 359 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 BRSK2Q8IWQ3 736 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 ARFGAP1Q8N6T3 406 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 PPM1NQ8N819 430 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 BCORP1Q8N888 145 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 HJURPQ8NCD3 748 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-206ENST00000471968 KIAA1524Q8TCG1 905 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 GRIN3AQ8TCU5 1115 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 SLC2A14Q8TDB8 520 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 POMGNT1Q8WZA1 660 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 BRF1Q92994 677 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 RNF34Q969K3 372 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 MYEOVQ96EZ4 313 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 PDXPQ96GD0 296 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 AHCYL2Q96HN2 611 aaKnown RBP6.65□□□□□ -1.34
HDAC3-206ENST00000471968 SGSM3Q96HU1 749 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 PRICKLE1Q96MT3 831 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-206ENST00000471968 AGAP3Q96P47 875 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 DDX50Q9BQ39 737 aaKnown RBP6.65□□□□□ -1.34
HDAC3-206ENST00000471968 WDR77Q9BQA1 342 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-206ENST00000471968 TRIM56Q9BRZ2 755 aaKnown RBP6.65□□□□□ -1.34
HDAC3-206ENST00000471968 TIPINQ9BVW5 301 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 HDAC8Q9BY41 377 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 BRD8Q9H0E9 1235 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 IKZF4Q9H2S9 585 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 AKIRIN1Q9H9L7 192 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-206ENST00000471968 MBNL1Q9NR56 388 aaKnown RBP6.65□□□□□ -1.34
HDAC3-206ENST00000471968 RBAKQ9NYW8 714 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-206ENST00000471968 LARSQ9P2J5 1176 aaKnown RBP6.65□□□□□ -1.34
HDAC3-206ENST00000471968 PDP2Q9P2J9 529 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 KLQ9UEF7 1012 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 KCNN3Q9UGI6 736 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 KLHL3Q9UH77 587 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 VPS51Q9UID3 782 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 SLC25A13Q9UJS0 675 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 PCDHB13Q9Y5F0 798 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 FADS3Q9Y5Q0 445 aa6.65□□□□□ -1.34
HDAC3-206ENST00000471968 HRNRQ86YZ3 2850 aaPredicted RBP6.65□□□□□ -1.35
HDAC3-206ENST00000471968 NCOA6Q14686 2063 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-206ENST00000471968 NPHP3-ACAD11A0A0J9YXS1 232 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 PRPF6O94906 941 aaKnown RBP6.64□□□□□ -1.35
HDAC3-206ENST00000471968 ECEL1O95672 775 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 LATS1O95835 1130 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 MT-ND3P03897 115 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 ADRB3P13945 408 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 HTR1BP28222 390 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 ADORA2BP29275 332 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 CHRNA3P32297 505 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 NEK3P51956 506 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 NDST2P52849 883 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 RRADP55042 308 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 CASP6P55212 293 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 TNNC1P63316 161 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 SQSTM1Q13501 440 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 LAMB3Q13751 1172 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 HIF1AQ16665 826 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 FAM133BQ5BKY9 247 aaKnown RBP6.64□□□□□ -1.35
HDAC3-206ENST00000471968 FCRL6Q6DN72 434 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 B4GALNT3Q6L9W6 998 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 FAM177A1Q8N128 213 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-206ENST00000471968 CFAP52Q8N1V2 620 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 DNAAF3Q8N9W5 541 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 ZSWIM2Q8NEG5 633 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 OR5B17Q8NGF7 314 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 CCL4L1Q8NHW4 92 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 ADAMTS17Q8TE56 1095 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 ADAMTS18Q8TE60 1221 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 EPS8L1Q8TE68 723 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 CA5BP1Q8WTZ4 195 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 SAAL1Q96ER3 474 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 ANKRD36BP1Q96IX9 119 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 CNDP1Q96KN2 507 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 SECISBP2Q96T21 854 aaKnown RBP6.64□□□□□ -1.35
HDAC3-206ENST00000471968 ZNF552Q9H707 407 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-206ENST00000471968 GPAMQ9HCL2 828 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 PDE11AQ9HCR9 933 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 STMN3Q9NZ72 180 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 LRFN1Q9P244 771 aa6.64□□□□□ -1.35
HDAC3-206ENST00000471968 DRGXA6NNA5 263 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 NEMP1O14524 444 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 PPM1DO15297 605 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 IRAK2O43187 625 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 ATP9BO43861 1147 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 CTAG2O75638 210 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 IPO13O94829 963 aaKnown RBP6.63□□□□□ -1.35
HDAC3-206ENST00000471968 FAM200BP0CF97 657 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms