RNA–Protein interactions for RNA: ENST00000460390.6

EXD3-202, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 2

Gene EXD3, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-202ENST00000460390 SNX12Q9UMY4 172 aa19.23■□□□□ 0.67
EXD3-202ENST00000460390 ZKSCAN5Q9Y2L8 839 aa19.23■□□□□ 0.67
EXD3-202ENST00000460390 GON4LQ3T8J9 2241 aa19.23■□□□□ 0.67
EXD3-202ENST00000460390 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.22■□□□□ 0.67
EXD3-202ENST00000460390 TTC24A2A3L6 582 aaPredicted RBP19.22■□□□□ 0.67
EXD3-202ENST00000460390 CTAGE9A4FU28 777 aa19.22■□□□□ 0.67
EXD3-202ENST00000460390 CFAP69A5D8W1 941 aa19.22■□□□□ 0.67
EXD3-202ENST00000460390 FAM47DPA6NHR8 397 aa19.22■□□□□ 0.67
EXD3-202ENST00000460390 RNF103O00237 685 aa19.22■□□□□ 0.67
EXD3-202ENST00000460390 CES2O00748 559 aa19.22■□□□□ 0.67
EXD3-202ENST00000460390 KCNN4O15554 427 aa19.22■□□□□ 0.67
EXD3-202ENST00000460390 TCP1P17987 556 aaKnown RBP19.22■□□□□ 0.67
EXD3-202ENST00000460390 POLR2LP62875 67 aaKnown RBP19.22■□□□□ 0.67
EXD3-202ENST00000460390 DSC2Q02487 901 aa19.22■□□□□ 0.67
EXD3-202ENST00000460390 TTC7BQ86TV6 843 aa19.22■□□□□ 0.67
EXD3-202ENST00000460390 TMEFF1Q8IYR6 380 aa19.22■□□□□ 0.67
EXD3-202ENST00000460390 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.22■□□□□ 0.67
EXD3-202ENST00000460390 CNTD1Q8N815 330 aa19.22■□□□□ 0.67
EXD3-202ENST00000460390 VOPP1Q96AW1 172 aa19.22■□□□□ 0.67
EXD3-202ENST00000460390 LOXL4Q96JB6 756 aa19.22■□□□□ 0.67
EXD3-202ENST00000460390 TEKT5Q96M29 485 aa19.22■□□□□ 0.67
EXD3-202ENST00000460390 TPX2Q9ULW0 747 aaKnown RBP19.22■□□□□ 0.67
EXD3-202ENST00000460390 TPRP12270 2363 aaKnown RBP19.22■□□□□ 0.67
EXD3-202ENST00000460390 TRPM6Q9BX84 2022 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 TBC1D3DA0A087WVF3 549 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 TBC1D3IA0A087WXS9 549 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 TBC1D3EA0A087X179 549 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 TBC1D3KA0A087X1G2 549 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 TSPAN11A1L157 253 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 TBC1D3FA6NER0 549 aaPredicted RBP19.21■□□□□ 0.67
EXD3-202ENST00000460390 TBC1D3LB9A6J9 549 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 GJB3O75712 270 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 TBC1D3HP0C7X1 549 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 NFKBIAP25963 317 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 DHPSP49366 369 aaPredicted RBP19.21■□□□□ 0.67
EXD3-202ENST00000460390 WASHC5Q12768 1159 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 SYCP2LQ5T4T6 812 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 TBC1D3GQ6DHY5 549 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 TBC1D3CQ6IPX1 549 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 PID1Q7Z2X4 250 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 TBC1D3Q8IZP1 549 aaPredicted RBP19.21■□□□□ 0.67
EXD3-202ENST00000460390 C17orf53Q8N3J3 647 aaPredicted RBP19.21■□□□□ 0.67
EXD3-202ENST00000460390 RASGEF1CQ8N431 466 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 SLC35B2Q8TB61 432 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 ARRDC2Q8TBH0 407 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 PDCD6IPQ8WUM4 868 aaKnown RBP19.21■□□□□ 0.67
EXD3-202ENST00000460390 WDR24Q96S15 920 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 SLC25A51Q9H1U9 297 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 GLOD4Q9HC38 313 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 PREBQ9HCU5 417 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 HOMER3Q9NSC5 361 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 R3HDM2Q9Y2K5 976 aaKnown RBP19.21■□□□□ 0.67
EXD3-202ENST00000460390 PCDHGC4Q9Y5F7 938 aa19.21■□□□□ 0.67
EXD3-202ENST00000460390 EPG5Q9HCE0 2579 aa19.21■□□□□ 0.66
EXD3-202ENST00000460390 TNRC6BQ9UPQ9 1833 aaKnown RBP19.2■□□□□ 0.66
EXD3-202ENST00000460390 ACACBO00763 2458 aa19.2■□□□□ 0.66
EXD3-202ENST00000460390 MEI4A8MW99 385 aa19.2■□□□□ 0.66
EXD3-202ENST00000460390 TRAFD1O14545 582 aaPredicted RBP19.2■□□□□ 0.66
EXD3-202ENST00000460390 GDF9O60383 454 aa19.2■□□□□ 0.66
EXD3-202ENST00000460390 DPP6P42658 865 aa19.2■□□□□ 0.66
EXD3-202ENST00000460390 ST3GAL2Q16842 350 aa19.2■□□□□ 0.66
EXD3-202ENST00000460390 LYSMD4Q5XG99 296 aa19.2■□□□□ 0.66
EXD3-202ENST00000460390 ITPRIPL1Q6GPH6 555 aa19.2■□□□□ 0.66
EXD3-202ENST00000460390 NEK5Q6P3R8 708 aa19.2■□□□□ 0.66
EXD3-202ENST00000460390 ECHDC3Q96DC8 303 aa19.2■□□□□ 0.66
EXD3-202ENST00000460390 HSPA12BQ96MM6 686 aa19.2■□□□□ 0.66
EXD3-202ENST00000460390 ARRDC1-AS1Q9H2J1 176 aa19.2■□□□□ 0.66
EXD3-202ENST00000460390 C10orf88Q9H8K7 445 aa19.2■□□□□ 0.66
EXD3-202ENST00000460390 DNPEPQ9ULA0 475 aa19.2■□□□□ 0.66
EXD3-202ENST00000460390 TTC7AQ9ULT0 858 aaPredicted RBP19.2■□□□□ 0.66
EXD3-202ENST00000460390 RAI2Q9Y5P3 530 aa19.2■□□□□ 0.66
EXD3-202ENST00000460390 METTL12A8MUP2 240 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 UPK3BL1B0FP48 263 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 UPK3BL2E5RIL1 263 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 PGRMC1O00264 195 aaKnown RBP19.19■□□□□ 0.66
EXD3-202ENST00000460390 NEMP1O14524 444 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 HTRA2O43464 458 aaPredicted RBP19.19■□□□□ 0.66
EXD3-202ENST00000460390 AP1G1O43747 822 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 LIASO43766 372 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 PRLRP16471 622 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 CD86P42081 329 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 NIPAL4Q0D2K0 466 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 ELP6Q0PNE2 266 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 TRAF2Q12933 501 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 CCNG2Q16589 344 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 UGP2Q16851 508 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 WDR45BQ5MNZ6 344 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 ARMC12Q5T9G4 340 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 KIAA0895LQ68EN5 471 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 ERAP2Q6P179 960 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 ARMCX6Q7L4S7 300 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 ZSCAN30Q86W11 494 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 NDUFAF2Q8N183 169 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 ZNF567Q8N184 647 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 DEFB119Q8N690 84 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 C1orf54Q8WWF1 131 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 ATG4AQ8WYN0 398 aa19.19■□□□□ 0.66
EXD3-202ENST00000460390 IMP4Q96G21 291 aaKnown RBP19.19■□□□□ 0.66
EXD3-202ENST00000460390 C6orf106Q9H6K1 298 aaPredicted RBP19.19■□□□□ 0.66
EXD3-202ENST00000460390 PCDHB9Q9Y5E1 797 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms