RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 IGSF11Q5DX21 431 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 CC2D1BQ5T0F9 858 aaKnown RBP5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 SEPT14Q6ZU15 432 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 GDF7Q7Z4P5 450 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 TAX1BP1Q86VP1 789 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 ANKRD35Q8N283 1001 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 TP53I13Q8NBR0 393 aaPredicted RBP5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 DNAAF1Q8NEP3 725 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 TMEM170AQ8WVE7 144 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 XAGE5Q8WWM1 108 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 TAF4BQ92750 862 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 ATP6V0A1Q93050 837 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 PTERQ96BW5 349 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 TNMDQ9H2S6 317 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 GALNT9Q9HCQ5 603 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 ENTPD7Q9NQZ7 604 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 OLAHQ9NV23 265 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 TBK1Q9UHD2 729 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 AMFRQ9UKV5 643 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 PCDHGA5Q9Y5G8 931 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 PCDHGA1Q9Y5H4 931 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 ADGRA2Q96PE1 1338 aa5.42□□□□□ -1.54
TM9SF3-202ENST00000443638 CARMIL2Q6F5E8 1435 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 TRGV11A0A075B6L2 103 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 A0A087WV48 116 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 LRRD1A4D1F6 860 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 LRRC72A6NJI9 287 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 AP4M1O00189 453 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 BIN1O00499 593 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 CES2O00748 559 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 ZNF263O14978 683 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 PRPF4O43172 522 aaKnown RBP eCLIP5.41□□□□□ -1.543e-24■□□□□ 9
TM9SF3-202ENST00000443638 PROM1O43490 865 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 ZC3H11AO75152 810 aaKnown RBP eCLIP5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 NKX2-2O95096 273 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 ZFYP08048 801 aaPredicted RBP5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 TNFRSF1AP19438 455 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 PI3P19957 117 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 TACR2P21452 398 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 ACADLP28330 430 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 RFC1P35251 1148 aaPredicted RBP5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 AMPHP49418 695 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 CLCN3P51790 818 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 BMXP51813 675 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 TPTEP56180 551 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 NXPH1P58417 271 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 WDR5P61964 334 aaKnown RBP5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 YWHAZP63104 245 aaKnown RBP5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 RHAGQ02094 409 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 ACSM2AQ08AH3 577 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 TAF7Q15545 349 aaPredicted RBP5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 LETM2Q2VYF4 491 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 VWA5B1Q5TIE3 1220 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 ACSM2BQ68CK6 577 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 Q6ZWC4 215 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 SPATA19Q7Z5L4 167 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 TSPAN33Q86UF1 283 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 LCA5Q86VQ0 697 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 MCEMP1Q8IX19 187 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 RNF168Q8IYW5 571 aaPredicted RBP5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 SYCP3Q8IZU3 236 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 D2HGDHQ8N465 521 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 ATAD1Q8NBU5 361 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 CAMKVQ8NCB2 501 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 B3GALNT2Q8NCR0 500 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 MYCBPAPQ8TBZ2 947 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 GDPD5Q8WTR4 605 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 FAM168AQ92567 244 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 RNF31Q96EP0 1072 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 OR14A2Q96R54 314 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 SEPT5Q99719 369 aaPredicted RBP5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 THAP7Q9BT49 309 aaPredicted RBP5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 C1QTNF5Q9BXJ0 243 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 NUAK2Q9H093 628 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 THAP9Q9H5L6 903 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 PAG1Q9NWQ8 432 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 ARL15Q9NXU5 204 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 GAR1Q9NY12 217 aaKnown RBP5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 DKK3Q9UBP4 350 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 FBXO40Q9UH90 709 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 XPO7Q9UIA9 1087 aaKnown RBP5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 UTYO14607 1347 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 SPAG9O60271 1321 aaKnown RBP5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 SPATA31A1Q5TZJ5 1347 aa5.41□□□□□ -1.54
TM9SF3-202ENST00000443638 ARHGEF37A1IGU5 675 aa5.4□□□□□ -1.54
TM9SF3-202ENST00000443638 TRIM64CA6NLI5 447 aa5.4□□□□□ -1.54
TM9SF3-202ENST00000443638 GOLGA6L6A8MZA4 724 aa5.4□□□□□ -1.54
TM9SF3-202ENST00000443638 VWC2LB2RUY7 222 aa5.4□□□□□ -1.54
TM9SF3-202ENST00000443638 KDM4EB2RXH2 506 aaPredicted RBP5.4□□□□□ -1.54
TM9SF3-202ENST00000443638 PRPSAP2O60256 369 aa5.4□□□□□ -1.54
TM9SF3-202ENST00000443638 RTN2O75298 545 aa5.4□□□□□ -1.54
TM9SF3-202ENST00000443638 HMMRO75330 724 aa5.4□□□□□ -1.54
TM9SF3-202ENST00000443638 PPFIA2O75334 1257 aa5.4□□□□□ -1.54
TM9SF3-202ENST00000443638 PENKP01210 267 aaPredicted RBP5.4□□□□□ -1.54
TM9SF3-202ENST00000443638 ADH4P08319 380 aa5.4□□□□□ -1.54
TM9SF3-202ENST00000443638 SRCP12931 536 aa5.4□□□□□ -1.54
TM9SF3-202ENST00000443638 SLC2A4P14672 509 aa5.4□□□□□ -1.54
TM9SF3-202ENST00000443638 CAPZA1P52907 286 aa5.4□□□□□ -1.54
TM9SF3-202ENST00000443638 ARSFP54793 590 aa5.4□□□□□ -1.54
TM9SF3-202ENST00000443638 CLDN2P57739 230 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms