RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 ZC3H10Q96K80 434 aaKnown RBP11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 PKNOX2Q96KN3 472 aa11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 LMLNQ96KR4 655 aa11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 SERPINB12Q96P63 405 aa11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 HHIPQ96QV1 700 aa11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 RBM15Q96T37 977 aaKnown RBP eCLIP11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 FAM83CQ9BQN1 747 aa11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 MGME1Q9BQP7 344 aa11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 GORASP1Q9BQQ3 440 aa11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 SPON2Q9BUD6 331 aa11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 POLR1EQ9GZS1 481 aaKnown RBP11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 SLC25A51Q9H1U9 297 aa11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 LRRC40Q9H9A6 602 aa11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 ZNF446Q9NWS9 450 aa11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 VPS51Q9UID3 782 aa11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 FBXO10Q9UK96 956 aa11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 INVSQ9Y283 1065 aa11.88□□□□□ -0.51
AC009404.1-202ENST00000439955 TCRBV7S3A2A0A539 114 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 PATE3B3GLJ2 98 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 NEDD8-MDP1E9PL57 170 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 CBX4O00257 560 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 CYP17A1P05093 508 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 ADH5P11766 374 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 CEACAM1P13688 526 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 TSHRP16473 764 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 LMAN1P49257 510 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 ARF5P84085 180 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 SULT2A1Q06520 285 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 MPP3Q13368 585 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 PLEKHG6Q3KR16 790 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 DNAJC21Q5F1R6 531 aaKnown RBP11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 RALGPS1Q5JS13 557 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 CFAP58Q5T655 872 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 ARMC3Q5W041 872 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 NAPEPLDQ6IQ20 393 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 LRRC8BQ6P9F7 803 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 LINC00523Q86TU6 105 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 PDCD7Q8N8D1 485 aaKnown RBP11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 WFIKKN2Q8TEU8 576 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 USP33Q8TEY7 942 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 TADA1Q96BN2 335 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 IMP4Q96G21 291 aaKnown RBP11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 TTC25Q96NG3 672 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 PHF12Q96QT6 1004 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 XPO6Q96QU8 1125 aaKnown RBP11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 MLPHQ9BV36 600 aaPredicted RBP11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 CINPQ9BW66 212 aaPredicted RBP11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 LINC00597Q9H2U6 94 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 PABPC3Q9H361 631 aaKnown RBP11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 ACBD3Q9H3P7 528 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 PLK2Q9NYY3 685 aa11.87□□□□□ -0.51
AC009404.1-202ENST00000439955 SDK1Q7Z5N4 2213 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 DMXL2Q8TDJ6 3036 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 SPAARA0A1B0GVQ0 90 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 ALOX15BO15296 676 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 ABHD2P08910 425 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 PABPC1P11940 636 aaKnown RBP11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 HLA-FP30511 346 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 SERPINH1P50454 418 aaKnown RBP11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 NR1H3Q13133 447 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 PITRM1Q5JRX3 1037 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 ALS2CLQ60I27 953 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 ZNF534Q76KX8 674 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 CAND1Q86VP6 1230 aaKnown RBP11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 CCDC25Q86WR0 208 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 AHI1Q8N157 1196 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 SYNPOQ8N3V7 929 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 PGBD5Q8N414 524 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 CPA6Q8N4T0 437 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 TAB3Q8N5C8 712 aaPredicted RBP11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 TSEN2Q8NCE0 465 aaKnown RBP11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 BHMTQ93088 406 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 OXNAD1Q96HP4 312 aaPredicted RBP11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 CDC42EP4Q9H3Q1 356 aaKnown RBP11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 NT5MQ9NPB1 228 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 TMEM9BQ9NQ34 198 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 ABCB8Q9NUT2 735 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 GGA2Q9UJY4 613 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 CLEC4EQ9ULY5 219 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 SLC27A6Q9Y2P4 619 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 KIAA1549LQ6ZVL6 1849 aa11.86□□□□□ -0.51
AC009404.1-202ENST00000439955 CCDC163A0A0D9SF12 145 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 GOLGA8MH3BSY2 632 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 CDX4O14627 284 aaPredicted RBP11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 KHNYNO15037 678 aaKnown RBP11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 SNAP91O60641 907 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 SPAG6O75602 509 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 RHOBTB1O94844 696 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 TMCC1O94876 653 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 TTC4O95801 387 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 CD160O95971 181 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 GSTA2P09210 222 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 NUDT17P0C025 328 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 CR2P20023 1033 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 CSRP1P21291 193 aaKnown RBP11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 GLDCP23378 1020 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 CD70P32970 193 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 HSD17B3P37058 310 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 EIF2DP41214 584 aaKnown RBP11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 MAGEA4P43358 317 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms