RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 BTBD1Q9H0C5 482 aa30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 RNF14Q9UBS8 474 aa30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 THADAQ6YHU6 1953 aa30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 CACNA1HO95180 2353 aa30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 TSPAN11A1L157 253 aa30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 FAM47DPA6NHR8 397 aa30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 PMPCBO75439 489 aa30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 ZNF189O75820 626 aaPredicted RBP30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 OXTRP30559 389 aa30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 ADPRHP54922 357 aa30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 SFSWAPQ12872 951 aaKnown RBP30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 PCSK7Q16549 785 aa30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 ITPRIPL1Q6GPH6 555 aa30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 CCDC137Q6PK04 289 aaKnown RBP30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 DEFB119Q8N690 84 aa30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 GPR174Q9BXC1 333 aa30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 TDRD1Q9BXT4 1180 aaKnown RBP30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 DDX47Q9H0S4 455 aaKnown RBP30.84■■■□□ 2.53
CSNK1E-206ENST00000413574 METTL18O95568 372 aa30.83■■■□□ 2.53
CSNK1E-206ENST00000413574 SEMG2Q02383 582 aa30.83■■■□□ 2.53
CSNK1E-206ENST00000413574 P3H1Q32P28 736 aa30.83■■■□□ 2.53
CSNK1E-206ENST00000413574 FAXCQ5TGI0 409 aa30.83■■■□□ 2.53
CSNK1E-206ENST00000413574 CCDC89Q8N998 374 aa30.83■■■□□ 2.53
CSNK1E-206ENST00000413574 ITM2BQ9Y287 266 aa30.83■■■□□ 2.53
CSNK1E-206ENST00000413574 DOCK9Q9BZ29 2069 aa30.82■■■□□ 2.52
CSNK1E-206ENST00000413574 PRR23AA6NEV1 266 aa30.82■■■□□ 2.52
CSNK1E-206ENST00000413574 LILRB5O75023 590 aa30.82■■■□□ 2.52
CSNK1E-206ENST00000413574 PGLSO95336 258 aa30.82■■■□□ 2.52
CSNK1E-206ENST00000413574 UGP2Q16851 508 aa30.82■■■□□ 2.52
CSNK1E-206ENST00000413574 ARMC12Q5T9G4 340 aa30.82■■■□□ 2.52
CSNK1E-206ENST00000413574 BRAT1Q6PJG6 821 aa30.82■■■□□ 2.52
CSNK1E-206ENST00000413574 ATL2Q8NHH9 583 aa30.82■■■□□ 2.52
CSNK1E-206ENST00000413574 HCAR2Q8TDS4 363 aa30.82■■■□□ 2.52
CSNK1E-206ENST00000413574 SMIM14Q96QK8 99 aa30.82■■■□□ 2.52
CSNK1E-206ENST00000413574 GGT7Q9UJ14 662 aa30.82■■■□□ 2.52
CSNK1E-206ENST00000413574 MUC6Q6W4X9 2439 aa30.82■■■□□ 2.52
CSNK1E-206ENST00000413574 SPINT1O43278 529 aa30.81■■■□□ 2.52
CSNK1E-206ENST00000413574 MAP3K13O43283 966 aa30.81■■■□□ 2.52
CSNK1E-206ENST00000413574 FZD6O60353 706 aa30.81■■■□□ 2.52
CSNK1E-206ENST00000413574 PRLP01236 227 aa30.81■■■□□ 2.52
CSNK1E-206ENST00000413574 PTPRRQ15256 657 aa30.81■■■□□ 2.52
CSNK1E-206ENST00000413574 SPAG17Q6Q759 2223 aa30.81■■■□□ 2.52
CSNK1E-206ENST00000413574 MLPHQ9BV36 600 aaPredicted RBP30.81■■■□□ 2.52
CSNK1E-206ENST00000413574 SGK2Q9HBY8 427 aa30.81■■■□□ 2.52
CSNK1E-206ENST00000413574 PCDH9Q9HC56 1237 aa30.81■■■□□ 2.52
CSNK1E-206ENST00000413574 FAM153AQ9UHL3 310 aa30.81■■■□□ 2.52
CSNK1E-206ENST00000413574 PLRG1O43660 514 aaKnown RBP30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 SEMA4FO95754 770 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 CPP00450 1065 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 RPL6Q02878 288 aaKnown RBP30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 KDELC1Q6UW63 502 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 PIH1D2Q8WWB5 315 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 C6orf106Q9H6K1 298 aaPredicted RBP30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 CDC23Q9UJX2 597 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 UPK3BL1B0FP48 263 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 UPK3BL2E5RIL1 263 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 SLC7A4O43246 635 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 NDUFS2O75306 463 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 CNR2P34972 360 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 RPL22P35268 128 aaKnown RBP30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 TRIP13Q15645 432 aaPredicted RBP30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 KLHL7Q8IXQ5 586 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 TMEFF1Q8IYR6 380 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 KIF18AQ8NI77 898 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 PCDH12Q9NPG4 1184 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 FAM86C1Q9NVL1 165 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 FADS3Q9Y5Q0 445 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 FRYLO94915 3013 aa30.8■■■□□ 2.52
CSNK1E-206ENST00000413574 SDK1Q7Z5N4 2213 aa30.79■■■□□ 2.52
CSNK1E-206ENST00000413574 XPAP23025 273 aaPredicted RBP30.79■■■□□ 2.52
CSNK1E-206ENST00000413574 WNT3AP56704 352 aa30.79■■■□□ 2.52
CSNK1E-206ENST00000413574 GALNT3Q14435 633 aa30.79■■■□□ 2.52
CSNK1E-206ENST00000413574 PARP6Q2NL67 630 aa30.79■■■□□ 2.52
CSNK1E-206ENST00000413574 SYCP2LQ5T4T6 812 aa30.79■■■□□ 2.52
CSNK1E-206ENST00000413574 CEP68Q76N32 757 aa30.79■■■□□ 2.52
CSNK1E-206ENST00000413574 IPMKQ8NFU5 416 aa30.79■■■□□ 2.52
CSNK1E-206ENST00000413574 MRGPRX2Q96LB1 330 aa30.79■■■□□ 2.52
CSNK1E-206ENST00000413574 TRIB3Q96RU7 358 aa30.79■■■□□ 2.52
CSNK1E-206ENST00000413574 RAPGEFL1Q9UHV5 662 aa30.79■■■□□ 2.52
CSNK1E-206ENST00000413574 TBC1D3DA0A087WVF3 549 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 TBC1D3IA0A087WXS9 549 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 TBC1D3EA0A087X179 549 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 TBC1D3KA0A087X1G2 549 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 TBC1D3FA6NER0 549 aaPredicted RBP30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 A8MX80 341 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 TBC1D3LB9A6J9 549 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 TBC1D3HP0C7X1 549 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 CTPS1P17812 591 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 FNTAP49354 379 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 PTPN5P54829 565 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 CCDC15Q0P6D6 951 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 OLIG2Q13516 323 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 TBC1D3GQ6DHY5 549 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 TBC1D3CQ6IPX1 549 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 SLC36A4Q6YBV0 504 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 TBC1D3Q8IZP1 549 aaPredicted RBP30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 LPCAT1Q8NF37 534 aa30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 ATOH1Q92858 354 aaPredicted RBP30.78■■■□□ 2.52
CSNK1E-206ENST00000413574 LRRK1Q38SD2 2015 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms