RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ZNF540Q8NDQ6 660 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 HDAC2Q92769 488 aaKnown RBP14.83□□□□□ -0.04
CCDC50-201ENST00000392455 OXNAD1Q96HP4 312 aaPredicted RBP14.83□□□□□ -0.04
CCDC50-201ENST00000392455 FNDC11Q9BVV2 318 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 OR10H1Q9Y4A9 318 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 IQCMA0A1B0GVH7 501 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 PDCD5O14737 125 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 TLX3O43711 291 aaPredicted RBP14.83□□□□□ -0.04
CCDC50-201ENST00000392455 ICAM1P05362 532 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 PET100P0DJ07 73 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 VMACQ2NL98 169 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 CRELD2Q6UXH1 353 aaPredicted RBP14.83□□□□□ -0.04
CCDC50-201ENST00000392455 CYP4F12Q9HCS2 524 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 IL1RAPQ9NPH3 570 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 ARMCX1Q9P291 453 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 FBXO10Q9UK96 956 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 MAN2B2Q9Y2E5 1009 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 RAG1P15918 1043 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 RPL5P46777 297 aaKnown RBP14.83□□□□□ -0.04
CCDC50-201ENST00000392455 HYIQ5T013 277 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 HSDL2Q6YN16 418 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 FBXO36Q8NEA4 188 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 MID1IP1Q9NPA3 183 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 GLS2Q9UI32 602 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 HSDL1Q3SXM5 330 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 C11orf63Q6NUN7 778 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 CNSTQ6PJW8 725 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 GMCL1Q96IK5 515 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 NDOR1Q9UHB4 597 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 SLC28A2O43868 658 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 RAB27AP51159 221 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 OVGP1Q12889 678 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 HIST1H2AAQ96QV6 131 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 COMMD4Q9H0A8 199 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 NOL11Q9H8H0 719 aaKnown RBP14.82□□□□□ -0.04
CCDC50-201ENST00000392455 SLC37A4O43826 429 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 CAMTA2O94983 1202 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 PON1P27169 355 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 ZNF234Q14588 700 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 ACAP2Q15057 778 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 KCNMB4Q86W47 210 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 DNAAF5Q86Y56 855 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 SIX5Q8N196 739 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 EIF1ADQ8N9N8 165 aaKnown RBP14.82□□□□□ -0.04
CCDC50-201ENST00000392455 MTMR10Q9NXD2 777 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 MTRRQ9UBK8 725 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 SERPINA3P01011 423 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 CYP11B1P15538 503 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 CDKL1Q00532 357 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 HIPK1Q86Z02 1210 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 GATAD2BQ8WXI9 593 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 TAS2R7Q9NYW3 318 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 ABI3Q9P2A4 366 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 TTLL8A6PVC2 850 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 ERP29P30040 261 aaKnown RBP14.82□□□□□ -0.04
CCDC50-201ENST00000392455 EFEMP1Q12805 493 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 CMTR2Q8IYT2 770 aaKnown RBP14.82□□□□□ -0.04
CCDC50-201ENST00000392455 NKAPQ8N5F7 415 aaKnown RBP14.82□□□□□ -0.04
CCDC50-201ENST00000392455 STAG3L4Q8TBR4 150 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 MSH4O15457 936 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 IDO1P14902 403 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 IL18Q14116 193 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 ANKFN1Q8N957 763 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 SLC27A6Q9Y2P4 619 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 CAVIN3Q969G5 261 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 KLHL5Q96PQ7 755 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 PLEKHG4BQ96PX9 1271 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 CATSPERZQ9NTU4 200 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 ALG5Q9Y673 324 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 TEX13CA0A0J9YWL9 993 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 CTSEP14091 401 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 FSCN1Q16658 493 aaKnown RBP14.82□□□□□ -0.04
CCDC50-201ENST00000392455 TC2NQ8N9U0 490 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 ERGIC2Q96RQ1 377 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 GPRC5CQ9NQ84 441 aa14.82□□□□□ -0.04
CCDC50-201ENST00000392455 MYH1P12882 1939 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 MYH2Q9UKX2 1941 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 MYH4Q9Y623 1939 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 ARL5CA6NH57 179 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 DHX15O43143 795 aaKnown RBP14.81□□□□□ -0.04
CCDC50-201ENST00000392455 CD2P06729 351 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 GSTT1P30711 240 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 RAD9BQ6WBX8 426 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 ADGRG6Q86SQ4 1221 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 NT5DC3Q86UY8 548 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 ZNF34Q8IZ26 560 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 LEMD2Q8NC56 503 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 STK32AQ8WU08 396 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 PAK6Q9NQU5 681 aaPredicted RBP14.81□□□□□ -0.04
CCDC50-201ENST00000392455 ASTN2O75129 1339 aaPredicted RBP14.81□□□□□ -0.04
CCDC50-201ENST00000392455 MRASO14807 208 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 FGFR1P11362 822 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 MAGEA12P43365 314 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 TTPAP49638 278 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 SLITRK4Q8IW52 837 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 BEND7Q8N7W2 519 aaPredicted RBP14.81□□□□□ -0.04
CCDC50-201ENST00000392455 HGH1Q9BTY7 390 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 MTF2Q9Y483 593 aaPredicted RBP14.81□□□□□ -0.04
CCDC50-201ENST00000392455 E9PCH4 1651 aa14.81□□□□□ -0.04
CCDC50-201ENST00000392455 A0A0G2JMP0 313 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms