RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 TBC1D3HP0C7X1 549 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 GPC1P35052 558 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 CDC16Q13042 620 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 ADGRF1Q5T601 910 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 RNASEH2BQ5TBB1 312 aaKnown RBP13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 TBC1D3GQ6DHY5 549 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 TBC1D3CQ6IPX1 549 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 TBC1D3Q8IZP1 549 aaPredicted RBP13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 NKAPQ8N5F7 415 aaKnown RBP13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 PTGR2Q8N8N7 351 aaPredicted RBP13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 OR56A4Q8NGH8 313 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 STRA6Q9BX79 667 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 ACE2Q9BYF1 805 aaPredicted RBP13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 ZFP14Q9HCL3 533 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 ABCB8Q9NUT2 735 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 KIF17Q9P2E2 1029 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 SQORQ9Y6N5 450 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 EIF4E1BA6NMX2 242 aaKnown RBP13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 TSHRP16473 764 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 RAB10P61026 200 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 MIR1-1HGQ9H1L0 117 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 SNX15Q9NRS6 342 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 ZNHIT2Q9UHR6 403 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 VWA7Q9Y334 891 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 TNRC6CQ9HCJ0 1690 aaKnown RBP13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 SOD2P04179 222 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 APODP05090 189 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 CTSEP14091 401 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 SCNN1AP37088 669 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 ESRRGP62508 458 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 ATXN7L2Q5T6C5 722 aaPredicted RBP13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 MFSD4BQ5TF39 518 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 DCAF12L1Q5VU92 463 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 CPA6Q8N4T0 437 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 BADQ92934 168 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 VRTNQ9H8Y1 702 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 ARMCX1Q9P291 453 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 SCOCQ9UIL1 159 aa13.2□□□□□ -0.3
PTPRN2-202ENST00000389416 A0A087X1B8 175 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 AGRPO00253 132 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 MGEA5O60502 916 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 GCATO75600 419 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 CHRNA4P43681 627 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 NDST2P52849 883 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 POU5F2Q8N7G0 328 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 FNDC5Q8NAU1 212 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 ZNF784Q8NCA9 323 aaPredicted RBP13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 C8orf48Q96LL4 319 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 TEKT5Q96M29 485 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 CLDND1Q9NY35 253 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 XPR1Q9UBH6 696 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 GNPTGQ9UJJ9 305 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 FAM32AQ9Y421 112 aaKnown RBP13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 METTL18O95568 372 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 DNTTP04053 509 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 MLNP12872 115 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 PTGIRP43119 386 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 RFX3P48380 749 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 MLLT6P55198 1093 aaPredicted RBP13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 PGS1Q32NB8 556 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 C15orf39Q6ZRI6 1047 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 PPP1R10Q96QC0 940 aaKnown RBP13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 AASDHPPTQ9NRN7 309 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 BEST1O76090 585 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 SERPINB3P29508 390 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 RFC2P35250 354 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 SEMG2Q02383 582 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 CYLC2Q14093 348 aaPredicted RBP13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 TRIML2Q8N7C3 387 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 C12orf50Q8NA57 414 aaPredicted RBP13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 WDR41Q9HAD4 459 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 TLR9Q9NR96 1032 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 FCHO1O14526 889 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 C2P06681 752 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 PDHA1P08559 390 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 ANXA5P08758 320 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 SKIV2L2P42285 1042 aaKnown RBP13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 DGKGP49619 791 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 PRIM2P49643 509 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 ITIH4Q14624 930 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 CCDC3Q9BQI4 270 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 CLIC5Q9NZA1 410 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 GJD2Q9UKL4 321 aa13.19□□□□□ -0.3
PTPRN2-202ENST00000389416 DCXO43602 365 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 PFKMP08237 780 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 HAPLN1P10915 354 aaPredicted RBP13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 IRF8Q02556 426 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 IL10RBQ08334 325 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 NFYCQ13952 458 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 FLOT2Q14254 428 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 MARCH8Q5T0T0 291 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 ESRP1Q6NXG1 681 aaKnown RBP13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 KLHL23Q8NBE8 558 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 OR10T2Q8NGX3 314 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 MIPOL1Q8TD10 442 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 ZNF398Q8TD17 642 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 ATXN2LQ8WWM7 1075 aaKnown RBP13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 FAM162AQ96A26 154 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 RHOJQ9H4E5 214 aa13.18□□□□□ -0.3
PTPRN2-202ENST00000389416 SH3BP4Q9P0V3 963 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms