RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 MKRN2Q9H000 416 aaKnown RBP9.63□□□□□ -0.87
SF3A3-201ENST00000373019 MIR1-1HGQ9H1L0 117 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 SMPD3Q9NY59 655 aaPredicted RBP9.63□□□□□ -0.87
SF3A3-201ENST00000373019 WARS2Q9UGM6 360 aaKnown RBP9.63□□□□□ -0.87
SF3A3-201ENST00000373019 PSAT1Q9Y617 370 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 FOCADQ5VW36 1801 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 A8MX80 341 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 NDST3O95803 873 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 DLGAP3O95886 979 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 CRHBPP24387 322 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 KDELR1P24390 212 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 SHMT2P34897 504 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 NUDT1P36639 197 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 GP2P55259 537 aaKnown RBP9.63□□□□□ -0.87
SF3A3-201ENST00000373019 GALNT12Q8IXK2 581 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 KIAA0319LQ8IZA0 1049 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 KCTD17Q8N5Z5 321 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 DEPDC1BQ8WUY9 529 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 PMEPA1Q969W9 287 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 SDCCAG3Q96C92 435 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 NRBF2Q96F24 287 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 TMEM206Q9H813 350 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 TUFT1Q9NNX1 390 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 CACNA2D2Q9NY47 1150 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 DNMT3LQ9UJW3 386 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 DSEQ9UL01 958 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 POLHQ9Y253 713 aa9.63□□□□□ -0.87
SF3A3-201ENST00000373019 EVPLLA8MZ36 301 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 APOC4-APOC2K7ER74 178 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 PDHXO00330 501 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 APOC2P02655 101 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 TFE3P19532 575 aaPredicted RBP9.62□□□□□ -0.87
SF3A3-201ENST00000373019 ACO1P21399 889 aaKnown RBP9.62□□□□□ -0.87
SF3A3-201ENST00000373019 MMP8P22894 467 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 CNTFP26441 200 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 POU6F2P78424 691 aaPredicted RBP9.62□□□□□ -0.87
SF3A3-201ENST00000373019 PRKCEQ02156 737 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 NAB1Q13506 487 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 SNX17Q15036 470 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 INSCQ1MX18 579 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 TUBA3EQ6PEY2 450 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 PODNQ7Z5L7 613 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 DHFR2Q86XF0 187 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 GATAD2AQ86YP4 633 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 POC5Q8NA72 575 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 SPATA18Q8TC71 538 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 C9orf16Q9BUW7 83 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 DGCR6LQ9BY27 220 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 COA1Q9GZY4 146 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 XPNPEP3Q9NQH7 507 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 GMIPQ9P107 970 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 TMEM181Q9P2C4 612 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 FZD1Q9UP38 647 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 WDR64B1ANS9 1081 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 NFKBIEO00221 500 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 MAN1A2O60476 641 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 LTFP02788 710 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 MAGP20916 626 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 RBL1P28749 1068 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 CCNA1P78396 465 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 TNFAIP2Q03169 654 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 PIGFQ07326 219 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 YIF1BQ5BJH7 314 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 PITRM1Q5JRX3 1037 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 TBCELQ5QJ74 424 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 C8orf82Q6P1X6 216 aaPredicted RBP9.62□□□□□ -0.87
SF3A3-201ENST00000373019 DARS2Q6PI48 645 aaKnown RBP9.62□□□□□ -0.87
SF3A3-201ENST00000373019 R3HCC1LQ7Z5L2 792 aaKnown RBP9.62□□□□□ -0.87
SF3A3-201ENST00000373019 PIAS4Q8N2W9 510 aaPredicted RBP9.62□□□□□ -0.87
SF3A3-201ENST00000373019 FAM109AQ8N4B1 249 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 DYNC2LI1Q8TCX1 351 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 MUL1Q969V5 352 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 ST6GAL2Q96JF0 529 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 DEPDC7Q96QD5 511 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 PSKH2Q96QS6 385 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 EBNA1BP2Q99848 306 aaKnown RBP9.62□□□□□ -0.87
SF3A3-201ENST00000373019 PAQR5Q9NXK6 330 aaPredicted RBP9.62□□□□□ -0.87
SF3A3-201ENST00000373019 RWDD3Q9Y3V2 267 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 HES2Q9Y543 173 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 CHMP2AO43633 222 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 TPST1O60507 370 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 INMTO95050 263 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 TFEBP19484 476 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 OXTRP30559 389 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 GARSP41250 739 aaKnown RBP9.62□□□□□ -0.87
SF3A3-201ENST00000373019 HTR3AP46098 478 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 LIG4P49917 911 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 TAGLNQ01995 201 aaKnown RBP9.62□□□□□ -0.87
SF3A3-201ENST00000373019 SEL1L3Q68CR1 1132 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 TBPL2Q6SJ96 375 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 TXNRD3Q86VQ6 643 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 PHF10Q8WUB8 498 aaKnown RBP9.62□□□□□ -0.87
SF3A3-201ENST00000373019 SLC22A17Q8WUG5 538 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 SLC10A4Q96EP9 437 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 CDHR1Q96JP9 859 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 RNF170Q96K19 258 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 ASB2Q96Q27 587 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 SLIRPQ9GZT3 109 aaKnown RBP9.62□□□□□ -0.87
SF3A3-201ENST00000373019 AS3MTQ9HBK9 375 aa9.62□□□□□ -0.87
SF3A3-201ENST00000373019 SPAG4Q9NPE6 437 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms