RNA–Protein interactions for RNA: ENST00000273482.10

TRPC1-201, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPC1, Length 4,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-201ENST00000273482 CARNMT1Q8N4J0 409 aa17.22■□□□□ 0.35
TRPC1-201ENST00000273482 ITFG2Q969R8 447 aa17.22■□□□□ 0.35
TRPC1-201ENST00000273482 ARHGAP39Q9C0H5 1083 aa17.22■□□□□ 0.35
TRPC1-201ENST00000273482 HIPK3Q9H422 1215 aa17.22■□□□□ 0.35
TRPC1-201ENST00000273482 SFMBT1Q9UHJ3 866 aa17.22■□□□□ 0.35
TRPC1-201ENST00000273482 PAPPAQ13219 1627 aa17.22■□□□□ 0.35
TRPC1-201ENST00000273482 SCN7AQ01118 1682 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 DHRS12A0PJE2 317 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 SPTLC1O15269 473 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 SOAT2O75908 522 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 OR1E1P30953 314 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 MRPS5P82675 430 aaKnown RBP17.21■□□□□ 0.35
TRPC1-201ENST00000273482 LSM12Q3MHD2 195 aaKnown RBP17.21■□□□□ 0.35
TRPC1-201ENST00000273482 DBF4BQ8NFT6 615 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 C16orf70Q9BSU1 422 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 C1orf21Q9H246 121 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 RNF112Q9ULX5 631 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 TEX264Q9Y6I9 313 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 GON4LQ3T8J9 2241 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 HCRTO43612 131 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 TSPAN8P19075 237 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 PSMB9P28065 219 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 MATKP42679 507 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 DPYSQ14117 519 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 SQLEQ14534 574 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 SGO1Q5FBB7 561 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 MRNIPQ6NTE8 343 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 KBTBD2Q8IY47 623 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 SFRP1Q8N474 314 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 CIDEBQ9UHD4 219 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 ASLP04424 464 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 CCNA2P20248 432 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 NDUFV1P49821 464 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 IL5RAQ01344 420 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 MSLNQ13421 630 aaPredicted RBP17.21■□□□□ 0.35
TRPC1-201ENST00000273482 TRIM60Q495X7 471 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 GDF6Q6KF10 455 aaPredicted RBP17.21■□□□□ 0.35
TRPC1-201ENST00000273482 SLC24A5Q71RS6 500 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 DDX53Q86TM3 631 aaKnown RBP17.21■□□□□ 0.35
TRPC1-201ENST00000273482 SAPCD2Q86UD0 394 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 IGDCC3Q8IVU1 814 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 TOP6BLQ8N6T0 577 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 TRPC4APQ8TEL6 797 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 CINPQ9BW66 212 aaPredicted RBP17.21■□□□□ 0.35
TRPC1-201ENST00000273482 MRPL9Q9BYD2 267 aaKnown RBP17.21■□□□□ 0.35
TRPC1-201ENST00000273482 ZNF358Q9NW07 568 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 ANAPC2Q9UJX6 822 aa17.21■□□□□ 0.35
TRPC1-201ENST00000273482 F2P00734 622 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 ITGAXP20702 1163 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 RAD23AP54725 363 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 SYT11Q9BT88 431 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 EXOSC4Q9NPD3 245 aaKnown RBP17.2■□□□□ 0.34
TRPC1-201ENST00000273482 DERAQ9Y315 318 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 ARHGEF9O43307 516 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 ERCC2P18074 760 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 PRDX6P30041 224 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 THOP1P52888 689 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 ACLYP53396 1101 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 FAM98BQ52LJ0 330 aaKnown RBP17.2■□□□□ 0.34
TRPC1-201ENST00000273482 SH3PXD2AQ5TCZ1 1133 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 DCLRE1AQ6PJP8 1040 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 B3GNT9Q6UX72 402 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 LRRC8DQ7L1W4 858 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 SERPINB11Q96P15 392 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 PPP1R10Q96QC0 940 aaKnown RBP17.2■□□□□ 0.34
TRPC1-201ENST00000273482 VPS28Q9UK41 221 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 SLC45A1Q9Y2W3 748 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 SLC30A1Q9Y6M5 507 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 COL4A1P02462 1669 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 H3BSA7 217 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 PARNO95453 639 aaKnown RBP17.2■□□□□ 0.34
TRPC1-201ENST00000273482 TOP3BO95985 862 aaKnown RBP17.2■□□□□ 0.34
TRPC1-201ENST00000273482 MLNP12872 115 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 XRCC1P18887 633 aaPredicted RBP17.2■□□□□ 0.34
TRPC1-201ENST00000273482 PBX3P40426 434 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 CTBP1Q13363 440 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 MARC1Q5VT66 337 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 NEPROQ6NW34 567 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 CDHR3Q6ZTQ4 885 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 DNAJB14Q8TBM8 379 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 GPR63Q9BZJ6 419 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 SLC17A6Q9P2U8 582 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 KCNU1A8MYU2 1149 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 RAMP2O60895 175 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 CCND3P30281 292 aaPredicted RBP17.2■□□□□ 0.34
TRPC1-201ENST00000273482 AHI1Q8N157 1196 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 LRTOMTQ8WZ04 291 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 ITGB1BP2Q9UKP3 347 aa17.2■□□□□ 0.34
TRPC1-201ENST00000273482 MTF2Q9Y483 593 aaPredicted RBP17.2■□□□□ 0.34
TRPC1-201ENST00000273482 FARP1Q9Y4F1 1045 aaPredicted RBP17.2■□□□□ 0.34
TRPC1-201ENST00000273482 PABPC4LP0CB38 370 aaKnown RBP17.19■□□□□ 0.34
TRPC1-201ENST00000273482 EPHB3P54753 998 aa17.19■□□□□ 0.34
TRPC1-201ENST00000273482 PLD1Q13393 1074 aa17.19■□□□□ 0.34
TRPC1-201ENST00000273482 C1orf220Q5T0J3 134 aa17.19■□□□□ 0.34
TRPC1-201ENST00000273482 ZDHHC13Q8IUH4 622 aa17.19■□□□□ 0.34
TRPC1-201ENST00000273482 UNC5BQ8IZJ1 945 aa17.19■□□□□ 0.34
TRPC1-201ENST00000273482 PHTF2Q8N3S3 785 aa17.19■□□□□ 0.34
TRPC1-201ENST00000273482 CMASQ8NFW8 434 aaPredicted RBP17.19■□□□□ 0.34
TRPC1-201ENST00000273482 SNX19Q92543 992 aa17.19■□□□□ 0.34
TRPC1-201ENST00000273482 COQ10BQ9H8M1 238 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms