RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 CYP1A1P04798 512 aaPredicted RBP16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 ADRB2P07550 413 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 VIL1P09327 827 aaKnown RBP16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 YAP1P46937 504 aaKnown RBP16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 CCR3P51677 355 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 ERICH5Q6P6B1 374 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 FBXL19Q6PCT2 694 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 CD302Q8IX05 232 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 OR10G6Q8NH81 332 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 PIH1D2Q8WWB5 315 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 ING4Q9UNL4 249 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 MXD1Q05195 221 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 STXBP5Q5T5C0 1151 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 TTC27Q6P3X3 843 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 TRIM40Q6P9F5 258 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 AKAP14Q86UN6 197 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 FAM47BQ8NA70 645 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 FAM98AQ8NCA5 519 aaKnown RBP16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 DMRTB1Q96MA1 342 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 MMADHCQ9H3L0 296 aaPredicted RBP16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 TBC1D24Q9ULP9 559 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 GMEB1Q9Y692 573 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 UBE2QL1A1L167 161 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 APOC4-APOC2K7ER74 178 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 KRT33AO76009 404 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 APOC2P02655 101 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 EIF2S3P41091 472 aaKnown RBP16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 KCNA10Q16322 511 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 DPF3Q92784 378 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 GAD1Q99259 594 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 CIB1Q99828 191 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 POPDC2Q9HBU9 364 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 ERGIC3Q9Y282 383 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 AZGP1P25311 298 aaKnown RBP16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 MPSTP25325 297 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 ADCYAP1R1P41586 468 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 ADAM17P78536 824 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 SLC45A4Q5BKX6 768 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 STOML2Q9UJZ1 356 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 BAZ2BQ9UIF8 2168 aaKnown RBP16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 COPZ1P61923 177 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 RPL7AP62424 266 aaKnown RBP16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 RAET1GQ6H3X3 334 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 ANKS1BQ7Z6G8 1248 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 OR52J3Q8NH60 311 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 ZNF354BQ96LW1 612 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 FCRL4Q96PJ5 515 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 KCNS3Q9BQ31 491 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 SNRNP25Q9BV90 132 aaKnown RBP16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 BLOC1S4Q9NUP1 217 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 RGSL1A5PLK6 1076 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 NPEPPSL1A6NEC2 478 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 SLC28A2O43868 658 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 TRUB2O95900 331 aaKnown RBP16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 PARP6Q2NL67 630 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 SNAP47Q5SQN1 464 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 PANX1Q96RD7 426 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 C12orf4Q9NQ89 552 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 CLTCL1P53675 1640 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 CAPN8A6NHC0 703 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 OR10H2O60403 315 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 TPST2O60704 377 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 FAM151BQ6UXP7 276 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 TBCBQ99426 244 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 MLPHQ9BV36 600 aaPredicted RBP16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 POLR1EQ9GZS1 481 aaKnown RBP16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 OSER1Q9NX31 292 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 PRDM4Q9UKN5 801 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 TRHDEQ9UKU6 1024 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 HAT1O14929 419 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 SCN2BO60939 215 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 VPS4BO75351 444 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 CRNNQ9UBG3 495 aaPredicted RBP16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 XPR1Q9UBH6 696 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 OR10H1Q9Y4A9 318 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 ZNF879B4DU55 563 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 TRIM38O00635 465 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 AP2A2O94973 939 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 CCNYL3P0C7X3 344 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 EFNA1P20827 205 aaPredicted RBP16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 LIN54Q6MZP7 749 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 NEK5Q6P3R8 708 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 ZFPM1Q8IX07 1006 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 REPS1Q96D71 796 aa16.89■□□□□ 0.29
TSPAN3-201ENST00000267970 ZNF432O94892 652 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 SPATA31D3P0C874 917 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 DGKAP23743 735 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 SLC7A2P52569 658 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 TAS2R40P59535 323 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 SPATA31D4Q6ZUB0 917 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 FAM124AQ86V42 546 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 SCAIQ8N9R8 606 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 MAML3Q96JK9 1138 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 OR52E6Q96RD3 313 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 CASKO14936 926 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 RECQL4O94761 1208 aa16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 STXBP1P61764 594 aaKnown RBP16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 SIM2Q14190 667 aaPredicted RBP16.88■□□□□ 0.29
TSPAN3-201ENST00000267970 CYP2A13Q16696 494 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms