RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 NUMBP49757 651 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 CDH18Q13634 790 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 HSP90AA5PQ58FG0 334 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 FYB2Q5VWT5 728 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 TMEM25Q86YD3 366 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 ADGRG2Q8IZP9 1017 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 WFDC5Q8TCV5 224 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 ISL2Q96A47 359 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 OTUB2Q96DC9 234 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 TRPV4Q9HBA0 871 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 C20orf96Q9NUD7 363 aaPredicted RBP22.84■■□□□ 1.25
CDX1-201ENST00000231656 DENND4AQ7Z401 1863 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 SLC9A3R1O14745 358 aaPredicted RBP22.84■■□□□ 1.25
CDX1-201ENST00000231656 MMP2P08253 660 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 MAGEA12P43365 314 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 LIG3P49916 1009 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 WNT3AP56704 352 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 PDE1CQ14123 709 aaPredicted RBP22.84■■□□□ 1.25
CDX1-201ENST00000231656 RNF219Q5W0B1 726 aaPredicted RBP22.84■■□□□ 1.25
CDX1-201ENST00000231656 STRA8Q7Z7C7 330 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 MFN1Q8IWA4 741 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 KIAA1958Q8N8K9 716 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 ARMC2Q8NEN0 867 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 RMDN2Q96LZ7 410 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 MCMBPQ9BTE3 642 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 FSD1LQ9BXM9 530 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 ACTR5Q9H9F9 607 aaPredicted RBP22.84■■□□□ 1.25
CDX1-201ENST00000231656 MRM3Q9HC36 420 aaKnown RBP22.84■■□□□ 1.25
CDX1-201ENST00000231656 ATP13A1Q9HD20 1204 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 SPHK2Q9NRA0 654 aa22.84■■□□□ 1.25
CDX1-201ENST00000231656 BGNP21810 368 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 FCARP24071 287 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 MTHFRP42898 656 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 MAGEA9P43362 315 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 LIMK2P53671 638 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 ACTN3Q08043 901 aaPredicted RBP22.83■■□□□ 1.24
CDX1-201ENST00000231656 POU6F1Q14863 301 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 IL31Q6EBC2 164 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 ZNF783Q6ZMS7 281 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 BPIFB1Q8TDL5 484 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 PTCD2Q8WV60 388 aaKnown RBP22.83■■□□□ 1.24
CDX1-201ENST00000231656 IRF7Q92985 503 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 TADA1Q96BN2 335 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 MYADMQ96S97 322 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 MUC3BQ9H195 1237 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 KLHL14Q9P2G3 628 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 CLEC4EQ9ULY5 219 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 TCAF1Q9Y4C2 921 aa22.83■■□□□ 1.24
CDX1-201ENST00000231656 KLF11O14901 512 aa22.82■■□□□ 1.24
CDX1-201ENST00000231656 PRAMEF11O60813 436 aa22.82■■□□□ 1.24
CDX1-201ENST00000231656 TOP3BO95985 862 aaKnown RBP22.82■■□□□ 1.24
CDX1-201ENST00000231656 SPRP35270 261 aaPredicted RBP22.82■■□□□ 1.24
CDX1-201ENST00000231656 MAXP61244 160 aa22.82■■□□□ 1.24
CDX1-201ENST00000231656 IHHQ14623 411 aa22.82■■□□□ 1.24
CDX1-201ENST00000231656 PRPF38BQ5VTL8 546 aaKnown RBP22.82■■□□□ 1.24
CDX1-201ENST00000231656 PDPK2PQ6A1A2 396 aa22.82■■□□□ 1.24
CDX1-201ENST00000231656 C10orf67Q8IYJ2 551 aa22.82■■□□□ 1.24
CDX1-201ENST00000231656 PGBD5Q8N414 524 aa22.82■■□□□ 1.24
CDX1-201ENST00000231656 SMRP1Q8NCR6 262 aa22.82■■□□□ 1.24
CDX1-201ENST00000231656 PPHLN1Q8NEY8 458 aaKnown RBP22.82■■□□□ 1.24
CDX1-201ENST00000231656 NSMCE1Q8WV22 266 aa22.82■■□□□ 1.24
CDX1-201ENST00000231656 SPON2Q9BUD6 331 aa22.82■■□□□ 1.24
CDX1-201ENST00000231656 ACE2Q9BYF1 805 aaPredicted RBP22.82■■□□□ 1.24
CDX1-201ENST00000231656 POMKQ9H5K3 350 aa22.82■■□□□ 1.24
CDX1-201ENST00000231656 ARNT2Q9HBZ2 717 aa22.82■■□□□ 1.24
CDX1-201ENST00000231656 VPS45Q9NRW7 570 aa22.82■■□□□ 1.24
CDX1-201ENST00000231656 HAUS2Q9NVX0 235 aa22.82■■□□□ 1.24
CDX1-201ENST00000231656 HEPACAM2A8MVW5 462 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 PENKP01210 267 aaPredicted RBP22.81■■□□□ 1.24
CDX1-201ENST00000231656 IL1BP01584 269 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 ETFBP38117 255 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 CHRNA4P43681 627 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 CSE1LP55060 971 aaKnown RBP22.81■■□□□ 1.24
CDX1-201ENST00000231656 PDE1BQ01064 536 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 DSC2Q02487 901 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 KYAT3Q6YP21 454 aaKnown RBP22.81■■□□□ 1.24
CDX1-201ENST00000231656 DCLK2Q8N568 766 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 ST13P5Q8NFI4 369 aaPredicted RBP22.81■■□□□ 1.24
CDX1-201ENST00000231656 OSCP1Q8WVF1 389 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 FEM1AQ9BSK4 669 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 PDFQ9HBH1 243 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 IARS2Q9NSE4 1012 aaKnown RBP22.81■■□□□ 1.24
CDX1-201ENST00000231656 DUS2Q9NX74 493 aaKnown RBP22.81■■□□□ 1.24
CDX1-201ENST00000231656 OBP2AQ9NY56 170 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 SIRPGQ9P1W8 387 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 EMCNQ9ULC0 261 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 KDELR3O43731 214 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 GLRA3O75311 464 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 MZF1P28698 734 aaPredicted RBP22.81■■□□□ 1.24
CDX1-201ENST00000231656 CD86P42081 329 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 SCTRP47872 440 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 LY6G5CQ5SRR4 150 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 ARMC3Q5W041 872 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 TANGO2Q6ICL3 276 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 FIBINQ8TAL6 211 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 ARRDC2Q8TBH0 407 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 C10orf82Q8WW14 230 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 THOC1Q96FV9 657 aaKnown RBP22.81■■□□□ 1.24
CDX1-201ENST00000231656 TSSK1BQ9BXA7 367 aa22.81■■□□□ 1.24
CDX1-201ENST00000231656 BBS2Q9BXC9 721 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms