RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 FARP1Q9Y4F1 1045 aaPredicted RBP10.53□□□□□ -0.72
LIG1-220ENST00000601091 DCAF8L1A6NGE4 600 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 KMOO15229 486 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 SSX5O60225 188 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 PMPCBO75439 489 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 MLNP12872 115 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 ANPEPP15144 967 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 STMN1P16949 149 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 TPH1P17752 444 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 MATKP42679 507 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 NPY2RP49146 381 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 UBAP2LQ14157 1087 aaKnown RBP10.53□□□□□ -0.72
LIG1-220ENST00000601091 ANO4Q32M45 955 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 TNFAIP8L3Q5GJ75 292 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 TCHHL1Q5QJ38 904 aaPredicted RBP10.53□□□□□ -0.72
LIG1-220ENST00000601091 BNC2Q6ZN30 1099 aaPredicted RBP10.53□□□□□ -0.72
LIG1-220ENST00000601091 ZER1Q7Z7L7 766 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 ZNF598Q86UK7 904 aaKnown RBP10.53□□□□□ -0.72
LIG1-220ENST00000601091 PIGZQ86VD9 579 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 KCNMB4Q86W47 210 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 PSTKQ8IV42 348 aaKnown RBP10.53□□□□□ -0.72
LIG1-220ENST00000601091 DEPDC4Q8N2C3 294 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 WDTC1Q8N5D0 677 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 OR52K1Q8NGK4 314 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 PYDC1Q8WXC3 89 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 WNT8BQ93098 351 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 TSPAN17Q96FV3 270 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 CATSPERBQ9H7T0 1116 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 ASB3Q9Y575 518 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 TEX264Q9Y6I9 313 aa10.53□□□□□ -0.72
LIG1-220ENST00000601091 MAGEC1O60732 1142 aa10.52□□□□□ -0.72
LIG1-220ENST00000601091 ADCYAP1R1P41586 468 aa10.52□□□□□ -0.72
LIG1-220ENST00000601091 PTPN9P43378 593 aa10.52□□□□□ -0.72
LIG1-220ENST00000601091 PLIN5Q00G26 463 aa10.52□□□□□ -0.72
LIG1-220ENST00000601091 BTKQ06187 659 aa10.52□□□□□ -0.72
LIG1-220ENST00000601091 CDH17Q12864 832 aa10.52□□□□□ -0.72
LIG1-220ENST00000601091 STX5Q13190 355 aa10.52□□□□□ -0.72
LIG1-220ENST00000601091 PRKD1Q15139 912 aaPredicted RBP10.52□□□□□ -0.72
LIG1-220ENST00000601091 TARBP2Q15633 366 aaKnown RBP10.52□□□□□ -0.72
LIG1-220ENST00000601091 FAM83EQ2M2I3 478 aa10.52□□□□□ -0.72
LIG1-220ENST00000601091 GALNT4Q8N4A0 578 aa10.52□□□□□ -0.72
LIG1-220ENST00000601091 CNDP2Q96KP4 475 aaKnown RBP10.52□□□□□ -0.72
LIG1-220ENST00000601091 TRIM15Q9C019 465 aa10.52□□□□□ -0.72
LIG1-220ENST00000601091 PDZD7Q9H5P4 517 aa10.52□□□□□ -0.72
LIG1-220ENST00000601091 COMMD3-BMI1R4GMX3 469 aa10.52□□□□□ -0.72
LIG1-220ENST00000601091 ERI2A8K979 691 aaKnown RBP10.52□□□□□ -0.73
LIG1-220ENST00000601091 ADM5C9JUS6 153 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 F8W8V4 182 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 GCATO75600 419 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 TM7SF2O76062 418 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 ADORA2AP29274 412 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 AVPR1AP37288 418 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 CASP2P42575 452 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 PRKAA1Q13131 559 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 LRRC8EQ6NSJ5 796 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 CFAP161Q6P656 301 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 ARHGAP36Q6ZRI8 547 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 STRADAQ7RTN6 431 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 ELMOD2Q8IZ81 293 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 ADAM32Q8TC27 787 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 IFT43Q96FT9 208 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 P2RY11Q96G91 374 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 SP110Q9HB58 689 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 FANCEQ9HB96 536 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 POPDC2Q9HBU9 364 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 NCKIPSDQ9NZQ3 722 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.52□□□□□ -0.73
LIG1-220ENST00000601091 RNF103-CHMP3A0A140T963 221 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 CCRL2O00421 344 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 LYPLA1O75608 230 aaPredicted RBP10.52□□□□□ -0.73
LIG1-220ENST00000601091 DDNO94850 711 aaPredicted RBP10.52□□□□□ -0.73
LIG1-220ENST00000601091 PIGNO95427 931 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 PLA2G4EQ3MJ16 856 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 TSGA13Q96PP4 275 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 BCO2Q9BYV7 579 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 HAPLN2Q9GZV7 340 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 XYLT2Q9H1B5 865 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 CAPN10Q9HC96 672 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 NDUFA13Q9P0J0 144 aa10.52□□□□□ -0.73
LIG1-220ENST00000601091 SLC15A5A6NIM6 579 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 SLC18A2Q05940 514 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 ALFQ53S48 1182 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 FAM26DQ5JW98 314 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 TRMT10BQ6PF06 316 aaKnown RBP10.51□□□□□ -0.73
LIG1-220ENST00000601091 ASRGL1Q7L266 308 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 SLC26A9Q7LBE3 791 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 CCDC117Q8IWD4 279 aaPredicted RBP10.51□□□□□ -0.73
LIG1-220ENST00000601091 ST13P5Q8NFI4 369 aaPredicted RBP10.51□□□□□ -0.73
LIG1-220ENST00000601091 CMTM3Q96MX0 182 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 VAT1Q99536 393 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 CAAP1Q9H8G2 361 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 DDX43Q9NXZ2 648 aaKnown RBP10.51□□□□□ -0.73
LIG1-220ENST00000601091 RPH3AQ9Y2J0 694 aaPredicted RBP10.51□□□□□ -0.73
LIG1-220ENST00000601091 STON1Q9Y6Q2 735 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 CCL15-CCL14A0A0B4J2E2 113 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 ASLP04424 464 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 AXLP30530 894 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 GRIK1P39086 918 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 LHX1P48742 406 aa10.51□□□□□ -0.73
LIG1-220ENST00000601091 PRKAA2P54646 552 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms