RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 RAD51BO15315 384 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 INSIG1O15503 277 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 BUB1BO60566 1050 aaPredicted RBP10.64□□□□□ -0.71
CCDC9-203ENST00000596938 TCF4P15884 667 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 EIF4A3P38919 411 aaKnown RBP10.64□□□□□ -0.71
CCDC9-203ENST00000596938 RABIFP47224 123 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 SLC25A11Q02978 314 aaKnown RBP10.64□□□□□ -0.71
CCDC9-203ENST00000596938 SLC18A3Q16572 532 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 ASTE1Q2TB18 679 aaPredicted RBP10.64□□□□□ -0.71
CCDC9-203ENST00000596938 TMEM52BQ4KMG9 183 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 TMCO4Q5TGY1 634 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 BRAT1Q6PJG6 821 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 KYAT3Q6YP21 454 aaKnown RBP10.64□□□□□ -0.71
CCDC9-203ENST00000596938 CCNI2Q6ZMN8 369 aaPredicted RBP10.64□□□□□ -0.71
CCDC9-203ENST00000596938 TMPRSS7Q7RTY8 843 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 SLC25A45Q8N413 288 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 EID2Q8N6I1 236 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 NPWQ8N729 165 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 NETO2Q8NC67 525 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 DENND6BQ8NEG7 585 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 FAM71BQ8TC56 605 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 TSC1Q92574 1164 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 CENPTQ96BT3 561 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 ZNF599Q96NL3 588 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 CSPG4P5Q96PW8 444 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 PSKH2Q96QS6 385 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 KLF6Q99612 283 aaPredicted RBP10.64□□□□□ -0.71
CCDC9-203ENST00000596938 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.64□□□□□ -0.71
CCDC9-203ENST00000596938 ZNHIT6Q9NWK9 470 aaKnown RBP10.64□□□□□ -0.71
CCDC9-203ENST00000596938 RCOR3Q9P2K3 495 aaPredicted RBP10.64□□□□□ -0.71
CCDC9-203ENST00000596938 LCMT1Q9UIC8 334 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 ANAPC7Q9UJX3 599 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 WDFY3Q8IZQ1 3526 aa10.64□□□□□ -0.71
CCDC9-203ENST00000596938 DOCK4Q8N1I0 1966 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 SPTY2D1-AS1A0A0U1RR47 76 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 SSU72P8A0A1W2PR75 194 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 CFAP69A5D8W1 941 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 DFFAO00273 331 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 TOR1BO14657 336 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 ENC1O14682 589 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 H2AFZP0C0S5 128 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 AMPD1P23109 780 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 DGKAP23743 735 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 IL4RP24394 825 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 RENBPP51606 427 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 PFN3P60673 137 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 ELP6Q0PNE2 266 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 ZNF211Q13398 564 aaPredicted RBP10.63□□□□□ -0.71
CCDC9-203ENST00000596938 SMAD1Q15797 465 aaKnown RBP10.63□□□□□ -0.71
CCDC9-203ENST00000596938 HADHQ16836 314 aaKnown RBP10.63□□□□□ -0.71
CCDC9-203ENST00000596938 UGP2Q16851 508 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 TSR1Q2NL82 804 aaKnown RBP10.63□□□□□ -0.71
CCDC9-203ENST00000596938 SMTNL2Q2TAL5 461 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 TXNRD3NBQ6F5E7 133 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 TMCO3Q6UWJ1 677 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 H2AFVQ71UI9 128 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 SRLQ86TD4 932 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 LRRC49Q8IUZ0 686 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 VSTM4Q8IW00 320 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 SLC22A18ASQ8N1D0 253 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 GALNT15Q8N3T1 639 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 TSEN2Q8NCE0 465 aaKnown RBP10.63□□□□□ -0.71
CCDC9-203ENST00000596938 HSPH1Q92598 858 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 BTBD6Q96KE9 485 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 EXOC2Q96KP1 924 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 CNDP2Q96KP4 475 aaKnown RBP10.63□□□□□ -0.71
CCDC9-203ENST00000596938 MYOCQ99972 504 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 C1QTNF7Q9BXJ2 289 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 CALN1Q9BXU9 219 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 ATP13A3Q9H7F0 1226 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 PCDH18Q9HCL0 1135 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 ETNK2Q9NVF9 386 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 UVRAGQ9P2Y5 699 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 SEPT3Q9UH03 358 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 GGT7Q9UJ14 662 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 ITM2BQ9Y287 266 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 AKAP13Q12802 2813 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 ZZEF1O43149 2961 aa10.63□□□□□ -0.71
CCDC9-203ENST00000596938 GOLGA8CPA6NN73 597 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 RIOK3O14730 519 aaKnown RBP10.62□□□□□ -0.71
CCDC9-203ENST00000596938 MAFKO60675 156 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 MMP20O60882 483 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 TM7SF2O76062 418 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 PROSCO94903 275 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 PIGNO95427 931 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 PEX11BO96011 259 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 CSF2P04141 144 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 CAPNS1P04632 268 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 TPM1P09493 284 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 CKMT2P17540 419 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 ITIH2P19823 946 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 XPAP23025 273 aaPredicted RBP10.62□□□□□ -0.71
CCDC9-203ENST00000596938 SERPINA4P29622 427 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 RGRP47804 291 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 ARSEP51690 589 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 HNRNPKP61978 463 aaKnown RBP eCLIP10.62□□□□□ -0.71
CCDC9-203ENST00000596938 YPEL5P62699 121 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 POLR2LP62875 67 aaKnown RBP10.62□□□□□ -0.71
CCDC9-203ENST00000596938 BCL2L1Q07817 233 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 ILKQ13418 452 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms