RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 TMEM117Q9H0C3 514 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 ZBP1Q9H171 429 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 MAGEH1Q9H213 219 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 SFXN1Q9H9B4 322 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 JMJD4Q9H9V9 463 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 LTB4R2Q9NPC1 389 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 HEBP1Q9NRV9 189 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 DNAJB4Q9UDY4 337 aa5.84□□□□□ -1.47
SF3B3-214ENST00000572365 THADAQ6YHU6 1953 aa5.84□□□□□ -1.48
SF3B3-214ENST00000572365 KIF26AQ9ULI4 1882 aaPredicted RBP5.83□□□□□ -1.48
SF3B3-214ENST00000572365 CLUHO75153 1309 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 MBLAC1A4D2B0 266 aaPredicted RBP5.83□□□□□ -1.48
SF3B3-214ENST00000572365 TMEM200CA6NKL6 621 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 AQP12BA6NM10 295 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 EIF4E1BA6NMX2 242 aaKnown RBP5.83□□□□□ -1.48
SF3B3-214ENST00000572365 C4orf47A7E2U8 309 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 ACKR2O00590 384 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 CD3EAPO15446 510 aaKnown RBP5.83□□□□□ -1.48
SF3B3-214ENST00000572365 SRGAP2O75044 1071 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 ITGA5P08648 1049 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 TGFB3P10600 412 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 HSD17B4P51659 736 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 CLCN4P51793 760 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 ITGA8P53708 1063 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 TERF1P54274 439 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 PRKAG1P54619 331 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 CDSNQ15517 529 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 PTCHD3Q3KNS1 767 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 ARHGAP15Q53QZ3 475 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.83□□□□□ -1.48
SF3B3-214ENST00000572365 KCNV1Q6PIU1 500 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 METTL7BQ6UX53 244 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 STOX1Q6ZVD7 989 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 FAM228AQ86W67 206 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 SLC15A3Q8IY34 581 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 ZNF276Q8N554 614 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 CPEB3Q8NE35 698 aaKnown RBP5.83□□□□□ -1.48
SF3B3-214ENST00000572365 DNAJB14Q8TBM8 379 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 NELL1Q92832 810 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 EXTL1Q92935 676 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 FAM136AQ96C01 138 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 EID2BQ96D98 161 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 KIF1BPQ96EK5 621 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 ZDHHC12Q96GR4 267 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 PCYT2Q99447 389 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 TMEM120AQ9BXJ8 343 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.83□□□□□ -1.48
SF3B3-214ENST00000572365 NACAP1Q9BZK3 213 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 AMBRA1Q9C0C7 1298 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 WDR6Q9NNW5 1121 aaKnown RBP5.83□□□□□ -1.48
SF3B3-214ENST00000572365 TMEM161AQ9NX61 479 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 DACT1Q9NYF0 836 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 EPS15L1Q9UBC2 864 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 GRHPRQ9UBQ7 328 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 KLK13Q9UKR3 277 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 HPSEQ9Y251 543 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 PCDHGB3Q9Y5G1 929 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 DGKBQ9Y6T7 804 aa5.83□□□□□ -1.48
SF3B3-214ENST00000572365 PDCD11Q14690 1871 aaKnown RBP5.83□□□□□ -1.48
SF3B3-214ENST00000572365 WDR81Q562E7 1941 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 PLXNB3Q9ULL4 1909 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 TRGV11A0A075B6L2 103 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 CCDC189A1A4V9 331 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 OR2W5A6NFC9 320 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 SHISA7A6NL88 538 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 ANHXE9PGG2 379 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 F8W810 466 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 RGS10O43665 173 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 COQ9O75208 318 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 PEX11BO96011 259 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 CTSAP10619 480 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 TDGF1P13385 188 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 RENBPP51606 427 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 BCAT1P54687 386 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 NSUN2Q08J23 767 aaKnown RBP eCLIP5.82□□□□□ -1.48
SF3B3-214ENST00000572365 CCNIQ14094 377 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 NEDD9Q14511 834 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 USP39Q53GS9 565 aaKnown RBP5.82□□□□□ -1.48
SF3B3-214ENST00000572365 CERCAMQ5T4B2 595 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 TMTC4Q5T4D3 741 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 ZKSCAN2Q63HK3 967 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 MTHFD1LQ6UB35 978 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 GRASPQ7Z6J2 395 aaPredicted RBP5.82□□□□□ -1.48
SF3B3-214ENST00000572365 ECHDC2Q86YB7 292 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 SMAP1Q8IYB5 467 aaPredicted RBP5.82□□□□□ -1.48
SF3B3-214ENST00000572365 KBTBD3Q8NAB2 608 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 SLC25A43Q8WUT9 341 aaPredicted RBP5.82□□□□□ -1.48
SF3B3-214ENST00000572365 ING5Q8WYH8 240 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 ZNF707Q96C28 371 aaPredicted RBP5.82□□□□□ -1.48
SF3B3-214ENST00000572365 HNRNPABQ99729 332 aaKnown RBP5.82□□□□□ -1.48
SF3B3-214ENST00000572365 SLC25A32Q9H2D1 315 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 NRDE2Q9H7Z3 1164 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 LMAN1LQ9HAT1 526 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 SLC2A4RGQ9NR83 387 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 ERAP1Q9NZ08 941 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 LRFN1Q9P244 771 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 DNAJB11Q9UBS4 358 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 VPS51Q9UID3 782 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 SERTAD3Q9UJW9 196 aa5.82□□□□□ -1.48
SF3B3-214ENST00000572365 TSC22D4Q9Y3Q8 395 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms