RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 ATP5F1P24539 256 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 TTKP33981 857 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 PIK3CAP42336 1068 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 ALDH7A1P49419 539 aaKnown RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 CLCN5P51795 746 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 CDH12P55289 794 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 TMPRSS3P57727 454 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 TFF2Q03403 129 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 CFHR1Q03591 330 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 CSTF3Q12996 717 aaKnown RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 TOMM20Q15388 145 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 TRIP6Q15654 476 aaKnown RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 SMTNL2Q2TAL5 461 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 MIDNQ504T8 468 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 PLEKHO1Q53GL0 409 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 CEP78Q5JTW2 689 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 UBAP2Q5T6F2 1119 aaKnown RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 FAM205BPQ63HN1 556 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 KLHL35Q6PF15 583 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 TMCO3Q6UWJ1 677 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 KDELC2Q7Z4H8 507 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 C17orf53Q8N3J3 647 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 SRBD1Q8N5C6 995 aaKnown RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 EXD3Q8N9H8 876 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 TMEM116Q8NCL8 245 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 WIPF2Q8TF74 440 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 SLC35F5Q8WV83 523 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 SGCDQ92629 289 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 LPAR1Q92633 364 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 FEM1CQ96JP0 617 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 TMEM68Q96MH6 324 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 ZNF570Q96NI8 536 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 MAP7D2Q96T17 732 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 LBHD1Q9BQE6 289 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 TRMOQ9BU70 441 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 HEMGNQ9BXL5 484 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 FRMD8Q9BZ67 464 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 B3GNT4Q9C0J1 378 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 FZD3Q9NPG1 666 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 ASAH2Q9NR71 780 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 SMYD2Q9NRG4 433 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 ADD3Q9UEY8 706 aaKnown RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 ZNF215Q9UL58 517 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 SRPRBQ9Y5M8 271 aaKnown RBP3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 SESN1Q9Y6P5 492 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 PIAS3Q9Y6X2 628 aa3.66□□□□□ -1.82
CTDSPL2-211ENST00000561189 PRSS47A8MTI9 375 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 SNAP23O00161 211 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 VILLO15195 856 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 TIMM44O43615 452 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 KLKB1P03952 638 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 HEXAP06865 529 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 CLTBP09497 229 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 CBSLP0DN79 551 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 CDAP32320 146 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 CBSP35520 551 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 AVPR1AP37288 418 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 PSMB10P40306 273 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 CENPAP49450 140 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 SRSF4Q08170 494 aaKnown RBP3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 AIMP2Q13155 320 aaKnown RBP3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 OLIG2Q13516 323 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 DRAP1Q14919 205 aaPredicted RBP3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 RNPS1Q15287 305 aaKnown RBP3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 INPP5JQ15735 1006 aaPredicted RBP3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 MEA1Q16626 185 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 MANEAQ5SRI9 462 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 GPATCH4Q5T3I0 446 aaKnown RBP3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 ZKSCAN2Q63HK3 967 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 DEF8Q6ZN54 512 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 TDRPQ86YL5 185 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 DENND6AQ8IWF6 608 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 ARHGAP12Q8IWW6 846 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 GJC3Q8NFK1 279 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 MPLKIPQ8TAP9 179 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 BICD2Q8TD16 824 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 PIGOQ8TEQ8 1089 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 FBXL8Q96CD0 374 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 CMTM3Q96MX0 182 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 CRAMP1Q96RY5 1269 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 PRSS22Q9GZN4 317 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 LHPPQ9H008 270 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 USP44Q9H0E7 712 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 KIF9Q9HAQ2 790 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 WDR6Q9NNW5 1121 aaKnown RBP3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 SLC6A13Q9NSD5 602 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 HSPB7Q9UBY9 170 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 MKLN1Q9UL63 735 aa3.65□□□□□ -1.83
CTDSPL2-211ENST00000561189 ZMYM2Q9UBW7 1377 aa3.64□□□□□ -1.83
CTDSPL2-211ENST00000561189 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
CTDSPL2-211ENST00000561189 TRBV5-7A0A0A0MS05 114 aa3.64□□□□□ -1.83
CTDSPL2-211ENST00000561189 SYNDIG1LA6NDD5 238 aa3.64□□□□□ -1.83
CTDSPL2-211ENST00000561189 C17orf100A8MU93 164 aa3.64□□□□□ -1.83
CTDSPL2-211ENST00000561189 STMND1H3BQB6 276 aa3.64□□□□□ -1.83
CTDSPL2-211ENST00000561189 HSPB6O14558 160 aa3.64□□□□□ -1.83
CTDSPL2-211ENST00000561189 SEC14L5O43304 696 aa3.64□□□□□ -1.83
CTDSPL2-211ENST00000561189 DOK2O60496 412 aa3.64□□□□□ -1.83
CTDSPL2-211ENST00000561189 PTP4A3O75365 173 aa3.64□□□□□ -1.83
CTDSPL2-211ENST00000561189 GPC4O75487 556 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms